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Pathway Human Homo sapiens

Translesion synthesis by Y family DNA polymerases bypasses lesions on DNA template

R-HSA-110313 in Reactome release 97: under DNA Damage Bypass, with 39 genes placed in it by the mapping files and 5 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-110313 (mouse), R-RNO-110313 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 39 genes in this human pathway; showing 1 to 39, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 1
GeneISG15AuthorityHGNC:4053Mapping file id9636 NCBI fileEvidenceTAS
GeneMAD2L2AuthorityHGNC:6764Mapping file id10459 NCBI fileEvidenceTAS
GeneNPLOC4AuthorityHGNC:18261Mapping file id55666 NCBI fileEvidenceTAS
GenePCLAFAuthorityHGNC:28961Mapping file id9768 NCBI fileEvidenceTAS
GenePCNAAuthorityHGNC:8729Mapping file id5111 NCBI fileEvidenceTAS
GenePOLD1AuthorityHGNC:9175Mapping file id5424 NCBI fileEvidenceTAS
GenePOLD2AuthorityHGNC:9176Mapping file id5425 NCBI fileEvidenceTAS
GenePOLD3AuthorityHGNC:20932Mapping file id10714 NCBI fileEvidenceTAS
GenePOLD4AuthorityHGNC:14106Mapping file id57804 NCBI fileEvidenceTAS
GenePOLEAuthorityHGNC:9177Mapping file id5426 NCBI fileEvidenceTAS
GenePOLE2AuthorityHGNC:9178Mapping file id5427 NCBI fileEvidenceTAS
GenePOLE3AuthorityHGNC:13546Mapping file id54107 NCBI fileEvidenceTAS
GenePOLE4AuthorityHGNC:18755Mapping file id56655 NCBI fileEvidenceTAS
GenePOLHAuthorityHGNC:9181Mapping file id5429 NCBI fileEvidenceTAS
GenePOLIAuthorityHGNC:9182Mapping file id11201 NCBI fileEvidenceTAS
GenePOLKAuthorityHGNC:9183Mapping file id51426 NCBI fileEvidenceTAS
GeneRCHY1AuthorityHGNC:17479Mapping file id25898 NCBI fileEvidenceTAS
GeneREV1AuthorityHGNC:14060Mapping file id51455 NCBI fileEvidenceTAS
GeneREV3LAuthorityHGNC:9968Mapping file id5980 NCBI fileEvidenceTAS
GeneRFC1AuthorityHGNC:9969Mapping file id5981 NCBI fileEvidenceTAS
GeneRFC2AuthorityHGNC:9970Mapping file id5982 NCBI fileEvidenceTAS
GeneRFC3AuthorityHGNC:9971Mapping file id5983 NCBI fileEvidenceTAS
GeneRFC4AuthorityHGNC:9972Mapping file id5984 NCBI fileEvidenceTAS
GeneRFC5AuthorityHGNC:9973Mapping file id5985 NCBI fileEvidenceTAS
GeneRPA1AuthorityHGNC:10289Mapping file id6117 NCBI fileEvidenceTAS
GeneRPA2AuthorityHGNC:10290Mapping file id6118 NCBI fileEvidenceTAS
GeneRPA3AuthorityHGNC:10291Mapping file id6119 NCBI fileEvidenceTAS
GeneRPS27AAuthorityHGNC:10417Mapping file id6233 NCBI fileEvidenceTAS
GeneSPRTNAuthorityHGNC:25356Mapping file id83932 NCBI fileEvidenceTAS
GeneTRIM25AuthorityHGNC:12932Mapping file id7706 NCBI fileEvidenceTAS
GeneUBA52AuthorityHGNC:12458Mapping file id7311 NCBI fileEvidenceTAS
GeneUBA7AuthorityHGNC:12471Mapping file id7318 NCBI fileEvidenceTAS
GeneUBBAuthorityHGNC:12463Mapping file id7314 NCBI fileEvidenceTAS
GeneUBCAuthorityHGNC:12468Mapping file id7316 NCBI fileEvidenceTAS
GeneUBE2L6AuthorityHGNC:12490Mapping file id9246 NCBI fileEvidenceTAS
GeneUFD1AuthorityHGNC:12520Mapping file id7353 NCBI fileEvidenceTAS
GeneUSP10AuthorityHGNC:12608Mapping file id9100 NCBI fileEvidenceTAS
GeneUSP43AuthorityHGNC:20072Mapping file id124739 NCBI fileEvidenceTAS
GeneVCPAuthorityHGNC:12666Mapping file id7415 NCBI fileEvidenceTAS

Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.