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Pathway Human Homo sapiens

Post-translational modification: synthesis of GPI-anchored proteins

R-HSA-163125 in Reactome release 97: under Post-translational protein modification, with 93 genes placed in it by the mapping files and 3 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-163125 (mouse), R-RNO-163125 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 93 genes in this human pathway; showing 1 to 93, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 1
GeneALPGAuthorityHGNC:441Mapping file id251 NCBI fileEvidenceTAS
GeneALPIAuthorityHGNC:437Mapping file id248 NCBI fileEvidenceTAS
GeneALPLAuthorityHGNC:438Mapping file id249 NCBI fileEvidenceTAS
GeneART3AuthorityHGNC:725Mapping file id419 NCBI fileEvidenceTAS
GeneART4AuthorityHGNC:726Mapping file id420 NCBI fileEvidenceTAS
GeneBST1AuthorityHGNC:1118Mapping file id683 NCBI fileEvidenceTAS
GeneCD109AuthorityHGNC:21685Mapping file id135228 NCBI fileEvidenceTAS
GeneCD52AuthorityHGNC:1804Mapping file id1043 NCBI fileEvidenceTAS
GeneCEACAM5AuthorityHGNC:1817Mapping file id1048 NCBI fileEvidenceTAS
GeneCEACAM7AuthorityHGNC:1819Mapping file id1087 NCBI fileEvidenceTAS
GeneCNTN3AuthorityHGNC:2173Mapping file id5067 NCBI fileEvidenceTAS
GeneCNTN4AuthorityHGNC:2174Mapping file id152330 NCBI fileEvidenceTAS
GeneCNTN5AuthorityHGNC:2175Mapping file id53942 NCBI fileEvidenceTAS
GeneCPMAuthorityHGNC:2311Mapping file id1368 NCBI fileEvidenceTAS
GeneDPM1AuthorityHGNC:3005Mapping file id8813 NCBI fileEvidenceTAS
GeneDPM2AuthorityHGNC:3006Mapping file id8818 NCBI fileEvidenceTAS
GeneDPM3AuthorityHGNC:3007Mapping file id54344 NCBI fileEvidenceTAS
GeneFCGR3BAuthorityHGNC:3620Mapping file id2215 NCBI fileEvidenceTAS
GeneFOLR2AuthorityHGNC:3793Mapping file id2350 NCBI fileEvidenceTAS
GeneGP2AuthorityHGNC:4441Mapping file id2813 NCBI fileEvidenceTAS
GeneGPAA1AuthorityHGNC:4446Mapping file id8733 NCBI fileEvidenceTAS
GeneGPIHBP1AuthorityHGNC:24945Mapping file id338328 NCBI fileEvidenceTAS
GeneGPLD1AuthorityHGNC:4459Mapping file id2822 NCBI fileEvidenceTAS
GeneIZUMO1RAuthorityHGNC:32565Mapping file id390243 NCBI fileEvidenceTAS
GeneLSAMPAuthorityHGNC:6705Mapping file id4045 NCBI fileEvidenceTAS
GeneLY6DAuthorityHGNC:13348Mapping file id8581 NCBI fileEvidenceTAS
GeneLY6EAuthorityHGNC:6727Mapping file id4061 NCBI fileEvidenceTAS
GeneLY6G6CAuthorityHGNC:13936Mapping file id80740 NCBI fileEvidenceTAS
GeneLY6G6DAuthorityHGNC:13935Mapping file id58530 NCBI fileEvidenceTAS
GeneLY6HAuthorityHGNC:6728Mapping file id4062 NCBI fileEvidenceTAS
GeneLY6KAuthorityHGNC:24225Mapping file id54742 NCBI fileEvidenceTAS
GeneLYPD1AuthorityHGNC:28431Mapping file id116372 NCBI fileEvidenceTAS
GeneLYPD2AuthorityHGNC:25215Mapping file id137797 NCBI fileEvidenceTAS
GeneLYPD3AuthorityHGNC:24880Mapping file id27076 NCBI fileEvidenceTAS
GeneLYPD4AuthorityHGNC:28659Mapping file id147719 NCBI fileEvidenceTAS
GeneLYPD5AuthorityHGNC:26397Mapping file id284348 NCBI fileEvidenceTAS
GeneLYPD6BAuthorityHGNC:27018Mapping file id130576 NCBI fileEvidenceTAS
GeneLYPD8AuthorityHGNC:44208Mapping file id646627 NCBI fileEvidenceTAS
GeneMDGA1AuthorityHGNC:19267Mapping file id266727 NCBI fileEvidenceTAS
GeneMDGA2AuthorityHGNC:19835Mapping file id161357 NCBI fileEvidenceTAS
GeneMELTFAuthorityHGNC:7037Mapping file id4241 NCBI fileEvidenceTAS
GeneMSLNAuthorityHGNC:7371Mapping file id10232 NCBI fileEvidenceTAS
GeneNEGR1AuthorityHGNC:17302Mapping file id257194 NCBI fileEvidenceTAS
GeneNRN1AuthorityHGNC:17972Mapping file id51299 NCBI fileEvidenceTAS
GeneNRN1LAuthorityHGNC:29811Mapping file id123904 NCBI fileEvidenceTAS
GeneNTMAuthorityHGNC:17941Mapping file id50863 NCBI fileEvidenceTAS
GeneNTNG1AuthorityHGNC:23319Mapping file id22854 NCBI fileEvidenceTAS
GeneNTNG2AuthorityHGNC:14288Mapping file id84628 NCBI fileEvidenceTAS
GeneOPCMLAuthorityHGNC:8143Mapping file id4978 NCBI fileEvidenceTAS
GeneOTOAAuthorityHGNC:16378Mapping file id146183 NCBI fileEvidenceTAS
GenePGAP1AuthorityHGNC:25712Mapping file id80055 NCBI fileEvidenceTAS
GenePIGAAuthorityHGNC:8957Mapping file id5277 NCBI fileEvidenceTAS
GenePIGBAuthorityHGNC:8959Mapping file id9488 NCBI fileEvidenceTAS
GenePIGCAuthorityHGNC:8960Mapping file id5279 NCBI fileEvidenceTAS
GenePIGFAuthorityHGNC:8962Mapping file id5281 NCBI fileEvidenceIEA, TAS
GenePIGGAuthorityHGNC:25985Mapping file id54872 NCBI fileEvidenceTAS
GenePIGHAuthorityHGNC:8964Mapping file id5283 NCBI fileEvidenceTAS
GenePIGKAuthorityHGNC:8965Mapping file id10026 NCBI fileEvidenceTAS
GenePIGLAuthorityHGNC:8966Mapping file id9487 NCBI fileEvidenceTAS
GenePIGMAuthorityHGNC:18858Mapping file id93183 NCBI fileEvidenceTAS
GenePIGNAuthorityHGNC:8967Mapping file id23556 NCBI fileEvidenceTAS
GenePIGOAuthorityHGNC:23215Mapping file id84720 NCBI fileEvidenceIEA
GenePIGPAuthorityHGNC:3046Mapping file id51227 NCBI fileEvidenceTAS
GenePIGQAuthorityHGNC:14135Mapping file id9091 NCBI fileEvidenceTAS
GenePIGSAuthorityHGNC:14937Mapping file id94005 NCBI fileEvidenceTAS
GenePIGTAuthorityHGNC:14938Mapping file id51604 NCBI fileEvidenceTAS
GenePIGUAuthorityHGNC:15791Mapping file id128869 NCBI fileEvidenceTAS
GenePIGVAuthorityHGNC:26031Mapping file id55650 NCBI fileEvidenceTAS
GenePIGWAuthorityHGNC:23213Mapping file id284098 NCBI fileEvidenceTAS
GenePIGXAuthorityHGNC:26046Mapping file id54965 NCBI fileEvidenceTAS
GenePIGYAuthorityHGNC:28213Mapping file id84992 NCBI fileEvidenceTAS
GenePIGZAuthorityHGNC:30596Mapping file id80235 NCBI fileEvidenceTAS
GenePLAURAuthorityHGNC:9053Mapping file id5329 NCBI fileEvidenceTAS
GenePLET1AuthorityHGNC:30053Mapping file id349633 NCBI fileEvidenceTAS
GenePRNDAuthorityHGNC:15748Mapping file id23627 NCBI fileEvidenceTAS
GenePRSS21AuthorityHGNC:9485Mapping file id10942 NCBI fileEvidenceTAS
GenePRSS41AuthorityHGNC:30715Mapping file id360226 NCBI fileEvidenceTAS
GenePSCAAuthorityHGNC:9500Mapping file id8000 NCBI fileEvidenceTAS
GeneRAET1GAuthorityHGNC:16795Mapping file id353091 NCBI fileEvidenceTAS
GeneRAET1LAuthorityHGNC:16798Mapping file id154064 NCBI fileEvidenceTAS
GeneRECKAuthorityHGNC:11345Mapping file id8434 NCBI fileEvidenceTAS
GeneRTN4RL1AuthorityHGNC:21329Mapping file id146760 NCBI fileEvidenceTAS
GeneRTN4RL2AuthorityHGNC:23053Mapping file id349667 NCBI fileEvidenceTAS
GeneSPACA4AuthorityHGNC:16441Mapping file id171169 NCBI fileEvidenceTAS
GeneSPRNAuthorityHGNC:16871Mapping file id503542 NCBI fileEvidenceTAS
GeneTECTAAuthorityHGNC:11720Mapping file id7007 NCBI fileEvidenceTAS
GeneTECTBAuthorityHGNC:11721Mapping file id6975 NCBI fileEvidenceTAS
GeneTEX101AuthorityHGNC:30722Mapping file id83639 NCBI fileEvidenceTAS
GeneTHY1AuthorityHGNC:11801Mapping file id7070 NCBI fileEvidenceTAS
GeneULBP2AuthorityHGNC:14894Mapping file id80328 NCBI fileEvidenceTAS
GeneVNN1AuthorityHGNC:12705Mapping file id8876 NCBI fileEvidenceTAS
GeneVNN2AuthorityHGNC:12706Mapping file id8875 NCBI fileEvidenceTAS
GeneXPNPEP2AuthorityHGNC:12823Mapping file id7512 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.