Skip to content

Create an account and get up to 25% off.

Order

Pathway Human Homo sapiens

Integrin cell surface interactions

R-HSA-216083 in Reactome release 97: under Extracellular matrix organization, with 85 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-216083 (mouse), R-RNO-216083 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 85 genes in this human pathway; showing 1 to 85, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 1
GeneAGRNAuthorityHGNC:329Mapping file id375790 NCBI fileEvidenceIEA
GeneBSGAuthorityHGNC:1116Mapping file id682 NCBI fileEvidenceTAS
GeneCD44AuthorityHGNC:1681Mapping file id960 NCBI fileEvidenceTAS
GeneCD47AuthorityHGNC:1682Mapping file id961 NCBI fileEvidenceTAS
GeneCDH1AuthorityHGNC:1748Mapping file id999 NCBI fileEvidenceTAS
GeneCOL10A1AuthorityHGNC:2185Mapping file id1300 NCBI fileEvidenceIEA
GeneCOL13A1AuthorityHGNC:2190Mapping file id1305 NCBI fileEvidenceTAS
GeneCOL16A1AuthorityHGNC:2193Mapping file id1307 NCBI fileEvidenceTAS
GeneCOL18A1AuthorityHGNC:2195Mapping file id80781 NCBI fileEvidenceTAS
GeneCOL1A1AuthorityHGNC:2197Mapping file id1277 NCBI fileEvidenceIEA, TAS
GeneCOL1A2AuthorityHGNC:2198Mapping file id1278 NCBI fileEvidenceIEA, TAS
GeneCOL23A1AuthorityHGNC:22990Mapping file id91522 NCBI fileEvidenceIEA
GeneCOL2A1AuthorityHGNC:2200Mapping file id1280 NCBI fileEvidenceIEA, TAS
GeneCOL3A1AuthorityHGNC:2201Mapping file id1281 NCBI fileEvidenceTAS
GeneCOL4A1AuthorityHGNC:2202Mapping file id1282 NCBI fileEvidenceIEA, TAS
GeneCOL4A2AuthorityHGNC:2203Mapping file id1284 NCBI fileEvidenceIEA, TAS
GeneCOL4A3AuthorityHGNC:2204Mapping file id1285 NCBI fileEvidenceIEA, TAS
GeneCOL4A4AuthorityHGNC:2206Mapping file id1286 NCBI fileEvidenceIEA, TAS
GeneCOL4A5AuthorityHGNC:2207Mapping file id1287 NCBI fileEvidenceIEA, TAS
GeneCOL4A6AuthorityHGNC:2208Mapping file id1288 NCBI fileEvidenceIEA, TAS
GeneCOL5A1AuthorityHGNC:2209Mapping file id1289 NCBI fileEvidenceTAS
GeneCOL5A2AuthorityHGNC:2210Mapping file id1290 NCBI fileEvidenceTAS
GeneCOL5A3AuthorityHGNC:14864Mapping file id50509 NCBI fileEvidenceTAS
GeneCOL6A1AuthorityHGNC:2211Mapping file id1291 NCBI fileEvidenceTAS
GeneCOL6A2AuthorityHGNC:2212Mapping file id1292 NCBI fileEvidenceTAS
GeneCOL6A3AuthorityHGNC:2213Mapping file id1293 NCBI fileEvidenceTAS
GeneCOL6A5AuthorityHGNC:26674Mapping file id256076 NCBI fileEvidenceTAS
GeneCOL6A6AuthorityHGNC:27023Mapping file id131873 NCBI fileEvidenceTAS
GeneCOL7A1AuthorityHGNC:2214Mapping file id1294 NCBI fileEvidenceTAS
GeneCOL8A1AuthorityHGNC:2215Mapping file id1295 NCBI fileEvidenceTAS
GeneCOL8A2AuthorityHGNC:2216Mapping file id1296 NCBI fileEvidenceTAS
GeneCOL9A1AuthorityHGNC:2217Mapping file id1297 NCBI fileEvidenceTAS
GeneCOL9A2AuthorityHGNC:2218Mapping file id1298 NCBI fileEvidenceTAS
GeneCOL9A3AuthorityHGNC:2219Mapping file id1299 NCBI fileEvidenceTAS
GeneCOMPAuthorityHGNC:2227Mapping file id1311 NCBI fileEvidenceTAS
GeneF11RAuthorityHGNC:14685Mapping file id50848 NCBI fileEvidenceTAS
GeneFBN1AuthorityHGNC:3603Mapping file id2200 NCBI fileEvidenceTAS
GeneFGAAuthorityHGNC:3661Mapping file id2243 NCBI fileEvidenceTAS
GeneFGBAuthorityHGNC:3662Mapping file id2244 NCBI fileEvidenceTAS
GeneFGGAuthorityHGNC:3694Mapping file id2266 NCBI fileEvidenceTAS
GeneFN1AuthorityHGNC:3778Mapping file id2335 NCBI fileEvidenceTAS
GeneHSPG2AuthorityHGNC:5273Mapping file id3339 NCBI fileEvidenceTAS
GeneIBSPAuthorityHGNC:5341Mapping file id3381 NCBI fileEvidenceTAS
GeneICAM1AuthorityHGNC:5344Mapping file id3383 NCBI fileEvidenceTAS
GeneICAM2AuthorityHGNC:5345Mapping file id3384 NCBI fileEvidenceTAS
GeneICAM3AuthorityHGNC:5346Mapping file id3385 NCBI fileEvidenceTAS
GeneICAM4AuthorityHGNC:5347Mapping file id3386 NCBI fileEvidenceTAS
GeneICAM5AuthorityHGNC:5348Mapping file id7087 NCBI fileEvidenceTAS
GeneITGA1AuthorityHGNC:6134Mapping file id3672 NCBI fileEvidenceIEA, TAS
GeneITGA10AuthorityHGNC:6135Mapping file id8515 NCBI fileEvidenceIEA, TAS
GeneITGA11AuthorityHGNC:6136Mapping file id22801 NCBI fileEvidenceIEA, TAS
GeneITGA2AuthorityHGNC:6137Mapping file id3673 NCBI fileEvidenceIEA, TAS
GeneITGA2BAuthorityHGNC:6138Mapping file id3674 NCBI fileEvidenceTAS
GeneITGA3AuthorityHGNC:6139Mapping file id3675 NCBI fileEvidenceIEA, TAS
GeneITGA4AuthorityHGNC:6140Mapping file id3676 NCBI fileEvidenceIEA, TAS
GeneITGA5AuthorityHGNC:6141Mapping file id3678 NCBI fileEvidenceIEA, TAS
GeneITGA6AuthorityHGNC:6142Mapping file id3655 NCBI fileEvidenceIEA, TAS
GeneITGA7AuthorityHGNC:6143Mapping file id3679 NCBI fileEvidenceIEA
GeneITGA8AuthorityHGNC:6144Mapping file id8516 NCBI fileEvidenceIEA, TAS
GeneITGA9AuthorityHGNC:6145Mapping file id3680 NCBI fileEvidenceIEA, TAS
GeneITGADAuthorityHGNC:6146Mapping file id3681 NCBI fileEvidenceTAS
GeneITGAEAuthorityHGNC:6147Mapping file id3682 NCBI fileEvidenceTAS
GeneITGALAuthorityHGNC:6148Mapping file id3683 NCBI fileEvidenceTAS
GeneITGAMAuthorityHGNC:6149Mapping file id3684 NCBI fileEvidenceTAS
GeneITGAVAuthorityHGNC:6150Mapping file id3685 NCBI fileEvidenceIEA, TAS
GeneITGAXAuthorityHGNC:6152Mapping file id3687 NCBI fileEvidenceTAS
GeneITGB1AuthorityHGNC:6153Mapping file id3688 NCBI fileEvidenceIEA, TAS
GeneITGB2AuthorityHGNC:6155Mapping file id3689 NCBI fileEvidenceTAS
GeneITGB3AuthorityHGNC:6156Mapping file id3690 NCBI fileEvidenceIEA, TAS
GeneITGB5AuthorityHGNC:6160Mapping file id3693 NCBI fileEvidenceIEA, TAS
GeneITGB6AuthorityHGNC:6161Mapping file id3694 NCBI fileEvidenceTAS
GeneITGB7AuthorityHGNC:6162Mapping file id3695 NCBI fileEvidenceTAS
GeneITGB8AuthorityHGNC:6163Mapping file id3696 NCBI fileEvidenceTAS
GeneJAM2AuthorityHGNC:14686Mapping file id58494 NCBI fileEvidenceTAS
GeneJAM3AuthorityHGNC:15532Mapping file id83700 NCBI fileEvidenceTAS
GeneKDRAuthorityHGNC:6307Mapping file id3791 NCBI fileEvidenceTAS
GeneLUMAuthorityHGNC:6724Mapping file id4060 NCBI fileEvidenceTAS
GeneMADCAM1AuthorityHGNC:6765Mapping file id8174 NCBI fileEvidenceTAS
GenePECAM1AuthorityHGNC:8823Mapping file id5175 NCBI fileEvidenceTAS
GeneSPP1AuthorityHGNC:11255Mapping file id6696 NCBI fileEvidenceIEA, TAS
GeneTHBS1AuthorityHGNC:11785Mapping file id7057 NCBI fileEvidenceTAS
GeneTNCAuthorityHGNC:5318Mapping file id3371 NCBI fileEvidenceTAS
GeneVCAM1AuthorityHGNC:12663Mapping file id7412 NCBI fileEvidenceTAS
GeneVTNAuthorityHGNC:12724Mapping file id7448 NCBI fileEvidenceTAS
GeneVWFAuthorityHGNC:12726Mapping file id7450 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.