Skip to content

Create an account and get up to 25% off.

Order

Pathway Human Homo sapiens

SUMOylation of RNA binding proteins

R-HSA-4570464 in Reactome release 97: under SUMO E3 ligases SUMOylate target proteins, with 48 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-4570464 (mouse), R-RNO-4570464 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 48 genes in this human pathway; showing 1 to 48, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 1
GeneAAASAuthorityHGNC:13666Mapping file id8086 NCBI fileEvidenceTAS
GeneBMI1AuthorityHGNC:1066Mapping file id648 NCBI fileEvidenceTAS
GeneCBX2AuthorityHGNC:1552Mapping file id84733 NCBI fileEvidenceTAS
GeneCBX4AuthorityHGNC:1554Mapping file id8535 NCBI fileEvidenceTAS
GeneCBX8AuthorityHGNC:15962Mapping file id57332 NCBI fileEvidenceTAS
GeneCOMMD3-BMI1AuthorityHGNC:48326Mapping file id100532731 NCBI fileEvidenceTAS
GeneHNRNPCAuthorityHGNC:5035Mapping file id3183 NCBI fileEvidenceTAS
GeneHNRNPKAuthorityHGNC:5044Mapping file id3190 NCBI fileEvidenceTAS
GeneNDC1AuthorityHGNC:25525Mapping file id55706 NCBI fileEvidenceTAS
GeneNOP58AuthorityHGNC:29926Mapping file id51602 NCBI fileEvidenceTAS
GeneNUP107AuthorityHGNC:29914Mapping file id57122 NCBI fileEvidenceTAS
GeneNUP133AuthorityHGNC:18016Mapping file id55746 NCBI fileEvidenceTAS
GeneNUP153AuthorityHGNC:8062Mapping file id9972 NCBI fileEvidenceTAS
GeneNUP155AuthorityHGNC:8063Mapping file id9631 NCBI fileEvidenceTAS
GeneNUP160AuthorityHGNC:18017Mapping file id23279 NCBI fileEvidenceTAS
GeneNUP188AuthorityHGNC:17859Mapping file id23511 NCBI fileEvidenceTAS
GeneNUP205AuthorityHGNC:18658Mapping file id23165 NCBI fileEvidenceTAS
GeneNUP210AuthorityHGNC:30052Mapping file id23225 NCBI fileEvidenceTAS
GeneNUP214AuthorityHGNC:8064Mapping file id8021 NCBI fileEvidenceTAS
GeneNUP35AuthorityHGNC:29797Mapping file id129401 NCBI fileEvidenceTAS
GeneNUP37AuthorityHGNC:29929Mapping file id79023 NCBI fileEvidenceTAS
GeneNUP42AuthorityHGNC:17010Mapping file id11097 NCBI fileEvidenceTAS
GeneNUP43AuthorityHGNC:21182Mapping file id348995 NCBI fileEvidenceTAS
GeneNUP50AuthorityHGNC:8065Mapping file id10762 NCBI fileEvidenceTAS
GeneNUP54AuthorityHGNC:17359Mapping file id53371 NCBI fileEvidenceTAS
GeneNUP58AuthorityHGNC:20261Mapping file id9818 NCBI fileEvidenceTAS
GeneNUP62AuthorityHGNC:8066Mapping file id23636 NCBI fileEvidenceTAS
GeneNUP85AuthorityHGNC:8734Mapping file id79902 NCBI fileEvidenceTAS
GeneNUP88AuthorityHGNC:8067Mapping file id4927 NCBI fileEvidenceTAS
GeneNUP93AuthorityHGNC:28958Mapping file id9688 NCBI fileEvidenceTAS
GeneNUP98AuthorityHGNC:8068Mapping file id4928 NCBI fileEvidenceTAS
GenePCGF2AuthorityHGNC:12929Mapping file id7703 NCBI fileEvidenceTAS
GenePHC1AuthorityHGNC:3182Mapping file id1911 NCBI fileEvidenceTAS
GenePHC2AuthorityHGNC:3183Mapping file id1912 NCBI fileEvidenceTAS
GenePHC3AuthorityHGNC:15682Mapping file id80012 NCBI fileEvidenceTAS
GenePOM121AuthorityHGNC:19702Mapping file id9883 NCBI fileEvidenceTAS
GenePOM121CAuthorityHGNC:34005Mapping file idENSG00000272391 Ensembl fileEvidenceTAS
GeneRAE1AuthorityHGNC:9828Mapping file id8480 NCBI fileEvidenceTAS
GeneRANBP2AuthorityHGNC:9848Mapping file id5903 NCBI fileEvidenceTAS
GeneRING1AuthorityHGNC:10018Mapping file id6015 NCBI fileEvidenceTAS
GeneRNF2AuthorityHGNC:10061Mapping file id6045 NCBI fileEvidenceTAS
GeneSCMH1AuthorityHGNC:19003Mapping file id22955 NCBI fileEvidenceTAS
GeneSEC13AuthorityHGNC:10697Mapping file id6396 NCBI fileEvidenceTAS
GeneSEH1LAuthorityHGNC:30379Mapping file id81929 NCBI fileEvidenceTAS
GeneSUMO1AuthorityHGNC:12502Mapping file id7341 NCBI fileEvidenceTAS
GeneSUMO2AuthorityHGNC:11125Mapping file id6613 NCBI fileEvidenceTAS
GeneTPRAuthorityHGNC:12017Mapping file id7175 NCBI fileEvidenceTAS
GeneUBE2IAuthorityHGNC:12485Mapping file id7329 NCBI fileEvidenceTAS

Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.