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Pathway Human Homo sapiens

Regulated Necrosis

R-HSA-5218859 in Reactome release 97: under Programmed Cell Death, with 62 genes placed in it by the mapping files and 2 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-5218859 (mouse), R-RNO-5218859 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 62 genes in this human pathway; showing 1 to 62, in pages of 100, sorted by symbol for reading. The order carries no ranking. 2 of the rows shown carry an id the identity file does not name, kept as the source wrote it.

Genes Reactome places in this human pathway, page 1 of 1
GeneBAK1AuthorityHGNC:949Mapping file id578 NCBI fileEvidenceTAS
GeneBAXAuthorityHGNC:959Mapping file id581 NCBI fileEvidenceTAS
GeneBIRC2AuthorityHGNC:590Mapping file id329 NCBI fileEvidenceTAS
GeneBIRC3AuthorityHGNC:591Mapping file id330 NCBI fileEvidenceTAS
GeneCASP1AuthorityHGNC:1499Mapping file id834 NCBI fileEvidenceTAS
GeneCASP3AuthorityHGNC:1504Mapping file id836 NCBI fileEvidenceTAS
GeneCASP4AuthorityHGNC:1505Mapping file id837 NCBI fileEvidenceTAS
GeneCASP5AuthorityHGNC:1506Mapping file id838 NCBI fileEvidenceTAS
GeneCASP8AuthorityHGNC:1509Mapping file id841 NCBI fileEvidenceTAS
GeneCDC37AuthorityHGNC:1735Mapping file id11140 NCBI fileEvidenceTAS
GeneCFLARAuthorityHGNC:1876Mapping file id8837 NCBI fileEvidenceTAS
GeneCHMP2AAuthorityHGNC:30216Mapping file id27243 NCBI fileEvidenceTAS
GeneCHMP2BAuthorityHGNC:24537Mapping file id25978 NCBI fileEvidenceTAS
GeneCHMP3AuthorityHGNC:29865Mapping file id51652 NCBI fileEvidenceTAS
GeneCHMP4AAuthorityHGNC:20274Mapping file id29082 NCBI fileEvidenceTAS
GeneCHMP4BAuthorityHGNC:16171Mapping file id128866 NCBI fileEvidenceTAS
GeneCHMP4CAuthorityHGNC:30599Mapping file id92421 NCBI fileEvidenceTAS
GeneCHMP6AuthorityHGNC:25675Mapping file id79643 NCBI fileEvidenceTAS
GeneCHMP7AuthorityHGNC:28439Mapping file id91782 NCBI fileEvidenceTAS
GeneCYCSAuthorityHGNC:19986Mapping file id54205 NCBI fileEvidenceTAS
GeneELANEAuthorityHGNC:3309Mapping file id1991 NCBI fileEvidenceTAS
GeneFADDAuthorityHGNC:3573Mapping file id8772 NCBI fileEvidenceTAS
GeneFASAuthorityHGNC:11920Mapping file id355 NCBI fileEvidenceTAS
GeneFASLGAuthorityHGNC:11936Mapping file id356 NCBI fileEvidenceTAS
GeneFLOT1AuthorityHGNC:3757Mapping file id10211 NCBI fileEvidenceTAS
GeneFLOT2AuthorityHGNC:3758Mapping file id2319 NCBI fileEvidenceTAS
GeneGSDMDAuthorityHGNC:25697Mapping file id79792 NCBI fileEvidenceTAS
GeneGSDMEAuthorityHGNC:2810Mapping file id1687 NCBI fileEvidenceTAS
GeneGZMBAuthorityHGNC:4709Mapping file id3002 NCBI fileEvidenceTAS
GeneHMGB1AuthorityHGNC:4983Mapping file id3146 NCBI fileEvidenceTAS
GeneHSP90AA1AuthorityHGNC:5253Mapping file id3320 NCBI fileEvidenceTAS
GeneIL18AuthorityHGNC:5986Mapping file id3606 NCBI fileEvidenceTAS
GeneIL1AAuthorityHGNC:5991Mapping file id3552 NCBI fileEvidenceTAS
GeneIL1BAuthorityHGNC:5992Mapping file id3553 NCBI fileEvidenceTAS
GeneIRF1AuthorityHGNC:6116Mapping file id3659 NCBI fileEvidenceTAS
GeneIRF2AuthorityHGNC:6117Mapping file id3660 NCBI fileEvidenceTAS
GeneITCHAuthorityHGNC:13890Mapping file id83737 NCBI fileEvidenceTAS
GeneMLKLAuthorityHGNC:26617Mapping file id197259 NCBI fileEvidenceTAS
GeneOGTAuthorityHGNC:8127Mapping file id8473 NCBI fileEvidenceTAS
GenePDCD6IPAuthorityHGNC:8766Mapping file id10015 NCBI fileEvidenceTAS
GenePELI1AuthorityHGNC:8827Mapping file id57162 NCBI fileEvidenceTAS
GenePRKNAuthorityHGNC:8607Mapping file id5071 NCBI fileEvidenceTAS
GeneRIPK1AuthorityHGNC:10019Mapping file id8737 NCBI fileEvidenceTAS
GeneRIPK3AuthorityHGNC:10021Mapping file id11035 NCBI fileEvidenceTAS
GeneRNF103-CHMP3AuthorityHGNC:38847Mapping file id100526767 NCBI fileEvidenceTAS
GeneRPS27AAuthorityHGNC:10417Mapping file id6233 NCBI fileEvidenceTAS
GeneSDCBPAuthorityHGNC:10662Mapping file id6386 NCBI fileEvidenceTAS
GeneSTUB1AuthorityHGNC:11427Mapping file id10273 NCBI fileEvidenceTAS
GeneTNFRSF10AAuthorityHGNC:11904Mapping file id8797 NCBI fileEvidenceTAS
GeneTNFRSF10BAuthorityHGNC:11905Mapping file id8795 NCBI fileEvidenceTAS
GeneTNFSF10AuthorityHGNC:11925Mapping file id8743 NCBI fileEvidenceTAS
GeneTP53AuthorityHGNC:11998Mapping file id7157 NCBI fileEvidenceTAS
GeneTP63AuthorityHGNC:15979Mapping file id8626 NCBI fileEvidenceTAS
GeneTRADDAuthorityHGNC:12030Mapping file id8717 NCBI fileEvidenceTAS
GeneTRAF2AuthorityHGNC:12032Mapping file id7186 NCBI fileEvidenceTAS
GeneUBA52AuthorityHGNC:12458Mapping file id7311 NCBI fileEvidenceTAS
GeneUBBAuthorityHGNC:12463Mapping file id7314 NCBI fileEvidenceTAS
GeneUBCAuthorityHGNC:12468Mapping file id7316 NCBI fileEvidenceTAS
GeneUBE2L3AuthorityHGNC:12488Mapping file id7332 NCBI fileEvidenceTAS
GeneXIAPAuthorityHGNC:592Mapping file id331 NCBI fileEvidenceTAS
Geneno symbol in the identity fileAuthoritynoneMapping file id2703361 NCBI fileEvidenceTAS
Geneno symbol in the identity fileAuthoritynoneMapping file id956533 NCBI fileEvidenceTAS

Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.