Skip to content

Create an account and get up to 25% off.

Order

Pathway Human Homo sapiens

Signaling by FGFR4

R-HSA-5654743 in Reactome release 97: under Signaling by FGFR, with 41 genes placed in it by the mapping files and 3 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-5654743 (mouse), R-RNO-5654743 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 41 genes in this human pathway; showing 1 to 41, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 1
GeneBRAFAuthorityHGNC:1097Mapping file id673 NCBI fileEvidenceTAS
GeneCBLAuthorityHGNC:1541Mapping file id867 NCBI fileEvidenceTAS
GeneFGF1AuthorityHGNC:3665Mapping file id2246 NCBI fileEvidenceTAS
GeneFGF16AuthorityHGNC:3672Mapping file id8823 NCBI fileEvidenceTAS
GeneFGF17AuthorityHGNC:3673Mapping file id8822 NCBI fileEvidenceTAS
GeneFGF18AuthorityHGNC:3674Mapping file id8817 NCBI fileEvidenceTAS
GeneFGF19AuthorityHGNC:3675Mapping file id9965 NCBI fileEvidenceTAS
GeneFGF2AuthorityHGNC:3676Mapping file id2247 NCBI fileEvidenceTAS
GeneFGF20AuthorityHGNC:3677Mapping file id26281 NCBI fileEvidenceTAS
GeneFGF23AuthorityHGNC:3680Mapping file id8074 NCBI fileEvidenceTAS
GeneFGF4AuthorityHGNC:3682Mapping file id2249 NCBI fileEvidenceTAS
GeneFGF6AuthorityHGNC:3684Mapping file id2251 NCBI fileEvidenceTAS
GeneFGF8AuthorityHGNC:3686Mapping file id2253 NCBI fileEvidenceTAS
GeneFGF9AuthorityHGNC:3687Mapping file id2254 NCBI fileEvidenceTAS
GeneFGFR4AuthorityHGNC:3691Mapping file id2264 NCBI fileEvidenceTAS
GeneFRS2AuthorityHGNC:16971Mapping file id10818 NCBI fileEvidenceTAS
GeneFRS3AuthorityHGNC:16970Mapping file id10817 NCBI fileEvidenceTAS
GeneGAB1AuthorityHGNC:4066Mapping file id2549 NCBI fileEvidenceTAS
GeneGRB2AuthorityHGNC:4566Mapping file id2885 NCBI fileEvidenceTAS
GeneHRASAuthorityHGNC:5173Mapping file id3265 NCBI fileEvidenceTAS
GeneKLBAuthorityHGNC:15527Mapping file id152831 NCBI fileEvidenceTAS
GeneKRASAuthorityHGNC:6407Mapping file id3845 NCBI fileEvidenceTAS
GeneMAPK1AuthorityHGNC:6871Mapping file id5594 NCBI fileEvidenceTAS
GeneMAPK3AuthorityHGNC:6877Mapping file id5595 NCBI fileEvidenceTAS
GeneMKNK1AuthorityHGNC:7110Mapping file id8569 NCBI fileEvidenceTAS
GeneNRASAuthorityHGNC:7989Mapping file id4893 NCBI fileEvidenceTAS
GenePIK3CAAuthorityHGNC:8975Mapping file id5290 NCBI fileEvidenceTAS
GenePIK3R1AuthorityHGNC:8979Mapping file id5295 NCBI fileEvidenceTAS
GenePLCG1AuthorityHGNC:9065Mapping file id5335 NCBI fileEvidenceTAS
GenePPP2CAAuthorityHGNC:9299Mapping file id5515 NCBI fileEvidenceTAS
GenePPP2CBAuthorityHGNC:9300Mapping file id5516 NCBI fileEvidenceTAS
GenePPP2R1AAuthorityHGNC:9302Mapping file id5518 NCBI fileEvidenceTAS
GenePTPN11AuthorityHGNC:9644Mapping file id5781 NCBI fileEvidenceTAS
GeneRPS27AAuthorityHGNC:10417Mapping file id6233 NCBI fileEvidenceTAS
GeneSHC1AuthorityHGNC:10840Mapping file id6464 NCBI fileEvidenceTAS
GeneSOS1AuthorityHGNC:11187Mapping file id6654 NCBI fileEvidenceTAS
GeneSPRY2AuthorityHGNC:11270Mapping file id10253 NCBI fileEvidenceTAS
GeneSRCAuthorityHGNC:11283Mapping file id6714 NCBI fileEvidenceTAS
GeneUBA52AuthorityHGNC:12458Mapping file id7311 NCBI fileEvidenceTAS
GeneUBBAuthorityHGNC:12463Mapping file id7314 NCBI fileEvidenceTAS
GeneUBCAuthorityHGNC:12468Mapping file id7316 NCBI fileEvidenceTAS

Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.