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Pathway Human Homo sapiens

MAPK1/MAPK3 signaling

R-HSA-5684996 in Reactome release 97: under MAPK family signaling cascades, with 274 genes placed in it by the mapping files and 2 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-5684996 (mouse), R-RNO-5684996 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 274 genes in this human pathway; showing 201 to 274, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 3 of 3
GenePSMC6AuthorityHGNC:9553Mapping file id5706 NCBI fileEvidenceTAS
GenePSMD1AuthorityHGNC:9554Mapping file id5707 NCBI fileEvidenceTAS
GenePSMD11AuthorityHGNC:9556Mapping file id5717 NCBI fileEvidenceTAS
GenePSMD12AuthorityHGNC:9557Mapping file id5718 NCBI fileEvidenceTAS
GenePSMD13AuthorityHGNC:9558Mapping file id5719 NCBI fileEvidenceTAS
GenePSMD14AuthorityHGNC:16889Mapping file id10213 NCBI fileEvidenceTAS
GenePSMD2AuthorityHGNC:9559Mapping file id5708 NCBI fileEvidenceTAS
GenePSMD3AuthorityHGNC:9560Mapping file id5709 NCBI fileEvidenceTAS
GenePSMD6AuthorityHGNC:9564Mapping file id9861 NCBI fileEvidenceTAS
GenePSMD7AuthorityHGNC:9565Mapping file id5713 NCBI fileEvidenceTAS
GenePSMD8AuthorityHGNC:9566Mapping file id5714 NCBI fileEvidenceTAS
GenePSPNAuthorityHGNC:9579Mapping file id5623 NCBI fileEvidenceTAS
GenePTK2AuthorityHGNC:9611Mapping file id5747 NCBI fileEvidenceTAS
GenePTPN11AuthorityHGNC:9644Mapping file id5781 NCBI fileEvidenceTAS
GenePTPN3AuthorityHGNC:9655Mapping file id5774 NCBI fileEvidenceTAS
GenePTPN7AuthorityHGNC:9659Mapping file id5778 NCBI fileEvidenceTAS
GenePTPRAAuthorityHGNC:9664Mapping file id5786 NCBI fileEvidenceTAS
GeneRAF1AuthorityHGNC:9829Mapping file id5894 NCBI fileEvidenceTAS
GeneRALGDSAuthorityHGNC:9842Mapping file id5900 NCBI fileEvidenceTAS
GeneRANBP9AuthorityHGNC:13727Mapping file id10048 NCBI fileEvidenceTAS
GeneRAP1AAuthorityHGNC:9855Mapping file id5906 NCBI fileEvidenceTAS
GeneRAP1BAuthorityHGNC:9857Mapping file id5908 NCBI fileEvidenceTAS
GeneRAPGEF2AuthorityHGNC:16854Mapping file id9693 NCBI fileEvidenceTAS
GeneRASA1AuthorityHGNC:9871Mapping file id5921 NCBI fileEvidenceTAS
GeneRASA2AuthorityHGNC:9872Mapping file id5922 NCBI fileEvidenceTAS
GeneRASA3AuthorityHGNC:20331Mapping file id22821 NCBI fileEvidenceTAS
GeneRASA4AuthorityHGNC:23181Mapping file id10156 NCBI fileEvidenceTAS
GeneRASAL1AuthorityHGNC:9873Mapping file id8437 NCBI fileEvidenceTAS
GeneRASAL2AuthorityHGNC:9874Mapping file id9462 NCBI fileEvidenceTAS
GeneRASAL3AuthorityHGNC:26129Mapping file id64926 NCBI fileEvidenceTAS
GeneRASGEF1AAuthorityHGNC:24246Mapping file id221002 NCBI fileEvidenceTAS
GeneRASGRF1AuthorityHGNC:9875Mapping file id5923 NCBI fileEvidenceTAS
GeneRASGRF2AuthorityHGNC:9876Mapping file id5924 NCBI fileEvidenceTAS
GeneRASGRP1AuthorityHGNC:9878Mapping file id10125 NCBI fileEvidenceTAS
GeneRASGRP3AuthorityHGNC:14545Mapping file id25780 NCBI fileEvidenceTAS
GeneRASGRP4AuthorityHGNC:18958Mapping file id115727 NCBI fileEvidenceTAS
GeneRBX1AuthorityHGNC:9928Mapping file id9978 NCBI fileEvidenceTAS
GeneRCE1AuthorityHGNC:13721Mapping file id9986 NCBI fileEvidenceTAS
GeneRETAuthorityHGNC:9967Mapping file id5979 NCBI fileEvidenceTAS
GeneRGL1AuthorityHGNC:30281Mapping file id23179 NCBI fileEvidenceTAS
GeneRGL2AuthorityHGNC:9769Mapping file id5863 NCBI fileEvidenceTAS
GeneRGL3AuthorityHGNC:30282Mapping file id57139 NCBI fileEvidenceTAS
GeneRPS27AAuthorityHGNC:10417Mapping file id6233 NCBI fileEvidenceTAS
GeneSEM1AuthorityHGNC:10845Mapping file id7979 NCBI fileEvidenceTAS
GeneSHC1AuthorityHGNC:10840Mapping file id6464 NCBI fileEvidenceTAS
GeneSHC2AuthorityHGNC:29869Mapping file id25759 NCBI fileEvidenceTAS
GeneSHC3AuthorityHGNC:18181Mapping file id53358 NCBI fileEvidenceTAS
GeneSHOC2AuthorityHGNC:15454Mapping file id8036 NCBI fileEvidenceTAS
GeneSOS1AuthorityHGNC:11187Mapping file id6654 NCBI fileEvidenceTAS
GeneSPRED1AuthorityHGNC:20249Mapping file id161742 NCBI fileEvidenceTAS
GeneSPRED2AuthorityHGNC:17722Mapping file id200734 NCBI fileEvidenceTAS
GeneSPRED3AuthorityHGNC:31041Mapping file id399473 NCBI fileEvidenceTAS
GeneSPTA1AuthorityHGNC:11272Mapping file id6708 NCBI fileEvidenceTAS
GeneSPTAN1AuthorityHGNC:11273Mapping file id6709 NCBI fileEvidenceTAS
GeneSPTBAuthorityHGNC:11274Mapping file id6710 NCBI fileEvidenceTAS
GeneSPTBN1AuthorityHGNC:11275Mapping file id6711 NCBI fileEvidenceTAS
GeneSPTBN2AuthorityHGNC:11276Mapping file id6712 NCBI fileEvidenceTAS
GeneSPTBN4AuthorityHGNC:14896Mapping file id57731 NCBI fileEvidenceTAS
GeneSPTBN5AuthorityHGNC:15680Mapping file id51332 NCBI fileEvidenceTAS
GeneSRCAuthorityHGNC:11283Mapping file id6714 NCBI fileEvidenceTAS
GeneSYNGAP1AuthorityHGNC:11497Mapping file id8831 NCBI fileEvidenceTAS
GeneTEKAuthorityHGNC:11724Mapping file id7010 NCBI fileEvidenceTAS
GeneTGFAAuthorityHGNC:11765Mapping file id7039 NCBI fileEvidenceTAS
GeneTLN1AuthorityHGNC:11845Mapping file id7094 NCBI fileEvidenceTAS
GeneTYK2AuthorityHGNC:12440Mapping file id7297 NCBI fileEvidenceTAS
GeneUBA52AuthorityHGNC:12458Mapping file id7311 NCBI fileEvidenceTAS
GeneUBBAuthorityHGNC:12463Mapping file id7314 NCBI fileEvidenceTAS
GeneUBCAuthorityHGNC:12468Mapping file id7316 NCBI fileEvidenceTAS
GeneUSP17L2AuthorityHGNC:34434Mapping file id377630 NCBI fileEvidenceTAS
GeneVCLAuthorityHGNC:12665Mapping file id7414 NCBI fileEvidenceTAS
GeneVWFAuthorityHGNC:12726Mapping file id7450 NCBI fileEvidenceTAS
GeneWDR83AuthorityHGNC:32672Mapping file id84292 NCBI fileEvidenceTAS
GeneYWHABAuthorityHGNC:12849Mapping file id7529 NCBI fileEvidenceTAS
GeneZDHHC9AuthorityHGNC:18475Mapping file id51114 NCBI fileEvidenceTAS

Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.