Pathway Human Homo sapiens
MAPK1/MAPK3 signaling
R-HSA-5684996 in Reactome release 97: under MAPK family signaling cascades, with 274 genes placed in it by the mapping files and 2 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-5684996 (mouse), R-RNO-5684996 (rat). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this human pathway
The mapping files place 274 genes in this human pathway; showing 201 to 274, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GenePSMC6 | AuthorityHGNC:9553 | Mapping file id5706 NCBI file | EvidenceTAS |
| GenePSMD1 | AuthorityHGNC:9554 | Mapping file id5707 NCBI file | EvidenceTAS |
| GenePSMD11 | AuthorityHGNC:9556 | Mapping file id5717 NCBI file | EvidenceTAS |
| GenePSMD12 | AuthorityHGNC:9557 | Mapping file id5718 NCBI file | EvidenceTAS |
| GenePSMD13 | AuthorityHGNC:9558 | Mapping file id5719 NCBI file | EvidenceTAS |
| GenePSMD14 | AuthorityHGNC:16889 | Mapping file id10213 NCBI file | EvidenceTAS |
| GenePSMD2 | AuthorityHGNC:9559 | Mapping file id5708 NCBI file | EvidenceTAS |
| GenePSMD3 | AuthorityHGNC:9560 | Mapping file id5709 NCBI file | EvidenceTAS |
| GenePSMD6 | AuthorityHGNC:9564 | Mapping file id9861 NCBI file | EvidenceTAS |
| GenePSMD7 | AuthorityHGNC:9565 | Mapping file id5713 NCBI file | EvidenceTAS |
| GenePSMD8 | AuthorityHGNC:9566 | Mapping file id5714 NCBI file | EvidenceTAS |
| GenePSPN | AuthorityHGNC:9579 | Mapping file id5623 NCBI file | EvidenceTAS |
| GenePTK2 | AuthorityHGNC:9611 | Mapping file id5747 NCBI file | EvidenceTAS |
| GenePTPN11 | AuthorityHGNC:9644 | Mapping file id5781 NCBI file | EvidenceTAS |
| GenePTPN3 | AuthorityHGNC:9655 | Mapping file id5774 NCBI file | EvidenceTAS |
| GenePTPN7 | AuthorityHGNC:9659 | Mapping file id5778 NCBI file | EvidenceTAS |
| GenePTPRA | AuthorityHGNC:9664 | Mapping file id5786 NCBI file | EvidenceTAS |
| GeneRAF1 | AuthorityHGNC:9829 | Mapping file id5894 NCBI file | EvidenceTAS |
| GeneRALGDS | AuthorityHGNC:9842 | Mapping file id5900 NCBI file | EvidenceTAS |
| GeneRANBP9 | AuthorityHGNC:13727 | Mapping file id10048 NCBI file | EvidenceTAS |
| GeneRAP1A | AuthorityHGNC:9855 | Mapping file id5906 NCBI file | EvidenceTAS |
| GeneRAP1B | AuthorityHGNC:9857 | Mapping file id5908 NCBI file | EvidenceTAS |
| GeneRAPGEF2 | AuthorityHGNC:16854 | Mapping file id9693 NCBI file | EvidenceTAS |
| GeneRASA1 | AuthorityHGNC:9871 | Mapping file id5921 NCBI file | EvidenceTAS |
| GeneRASA2 | AuthorityHGNC:9872 | Mapping file id5922 NCBI file | EvidenceTAS |
| GeneRASA3 | AuthorityHGNC:20331 | Mapping file id22821 NCBI file | EvidenceTAS |
| GeneRASA4 | AuthorityHGNC:23181 | Mapping file id10156 NCBI file | EvidenceTAS |
| GeneRASAL1 | AuthorityHGNC:9873 | Mapping file id8437 NCBI file | EvidenceTAS |
| GeneRASAL2 | AuthorityHGNC:9874 | Mapping file id9462 NCBI file | EvidenceTAS |
| GeneRASAL3 | AuthorityHGNC:26129 | Mapping file id64926 NCBI file | EvidenceTAS |
| GeneRASGEF1A | AuthorityHGNC:24246 | Mapping file id221002 NCBI file | EvidenceTAS |
| GeneRASGRF1 | AuthorityHGNC:9875 | Mapping file id5923 NCBI file | EvidenceTAS |
| GeneRASGRF2 | AuthorityHGNC:9876 | Mapping file id5924 NCBI file | EvidenceTAS |
| GeneRASGRP1 | AuthorityHGNC:9878 | Mapping file id10125 NCBI file | EvidenceTAS |
| GeneRASGRP3 | AuthorityHGNC:14545 | Mapping file id25780 NCBI file | EvidenceTAS |
| GeneRASGRP4 | AuthorityHGNC:18958 | Mapping file id115727 NCBI file | EvidenceTAS |
| GeneRBX1 | AuthorityHGNC:9928 | Mapping file id9978 NCBI file | EvidenceTAS |
| GeneRCE1 | AuthorityHGNC:13721 | Mapping file id9986 NCBI file | EvidenceTAS |
| GeneRET | AuthorityHGNC:9967 | Mapping file id5979 NCBI file | EvidenceTAS |
| GeneRGL1 | AuthorityHGNC:30281 | Mapping file id23179 NCBI file | EvidenceTAS |
| GeneRGL2 | AuthorityHGNC:9769 | Mapping file id5863 NCBI file | EvidenceTAS |
| GeneRGL3 | AuthorityHGNC:30282 | Mapping file id57139 NCBI file | EvidenceTAS |
| GeneRPS27A | AuthorityHGNC:10417 | Mapping file id6233 NCBI file | EvidenceTAS |
| GeneSEM1 | AuthorityHGNC:10845 | Mapping file id7979 NCBI file | EvidenceTAS |
| GeneSHC1 | AuthorityHGNC:10840 | Mapping file id6464 NCBI file | EvidenceTAS |
| GeneSHC2 | AuthorityHGNC:29869 | Mapping file id25759 NCBI file | EvidenceTAS |
| GeneSHC3 | AuthorityHGNC:18181 | Mapping file id53358 NCBI file | EvidenceTAS |
| GeneSHOC2 | AuthorityHGNC:15454 | Mapping file id8036 NCBI file | EvidenceTAS |
| GeneSOS1 | AuthorityHGNC:11187 | Mapping file id6654 NCBI file | EvidenceTAS |
| GeneSPRED1 | AuthorityHGNC:20249 | Mapping file id161742 NCBI file | EvidenceTAS |
| GeneSPRED2 | AuthorityHGNC:17722 | Mapping file id200734 NCBI file | EvidenceTAS |
| GeneSPRED3 | AuthorityHGNC:31041 | Mapping file id399473 NCBI file | EvidenceTAS |
| GeneSPTA1 | AuthorityHGNC:11272 | Mapping file id6708 NCBI file | EvidenceTAS |
| GeneSPTAN1 | AuthorityHGNC:11273 | Mapping file id6709 NCBI file | EvidenceTAS |
| GeneSPTB | AuthorityHGNC:11274 | Mapping file id6710 NCBI file | EvidenceTAS |
| GeneSPTBN1 | AuthorityHGNC:11275 | Mapping file id6711 NCBI file | EvidenceTAS |
| GeneSPTBN2 | AuthorityHGNC:11276 | Mapping file id6712 NCBI file | EvidenceTAS |
| GeneSPTBN4 | AuthorityHGNC:14896 | Mapping file id57731 NCBI file | EvidenceTAS |
| GeneSPTBN5 | AuthorityHGNC:15680 | Mapping file id51332 NCBI file | EvidenceTAS |
| GeneSRC | AuthorityHGNC:11283 | Mapping file id6714 NCBI file | EvidenceTAS |
| GeneSYNGAP1 | AuthorityHGNC:11497 | Mapping file id8831 NCBI file | EvidenceTAS |
| GeneTEK | AuthorityHGNC:11724 | Mapping file id7010 NCBI file | EvidenceTAS |
| GeneTGFA | AuthorityHGNC:11765 | Mapping file id7039 NCBI file | EvidenceTAS |
| GeneTLN1 | AuthorityHGNC:11845 | Mapping file id7094 NCBI file | EvidenceTAS |
| GeneTYK2 | AuthorityHGNC:12440 | Mapping file id7297 NCBI file | EvidenceTAS |
| GeneUBA52 | AuthorityHGNC:12458 | Mapping file id7311 NCBI file | EvidenceTAS |
| GeneUBB | AuthorityHGNC:12463 | Mapping file id7314 NCBI file | EvidenceTAS |
| GeneUBC | AuthorityHGNC:12468 | Mapping file id7316 NCBI file | EvidenceTAS |
| GeneUSP17L2 | AuthorityHGNC:34434 | Mapping file id377630 NCBI file | EvidenceTAS |
| GeneVCL | AuthorityHGNC:12665 | Mapping file id7414 NCBI file | EvidenceTAS |
| GeneVWF | AuthorityHGNC:12726 | Mapping file id7450 NCBI file | EvidenceTAS |
| GeneWDR83 | AuthorityHGNC:32672 | Mapping file id84292 NCBI file | EvidenceTAS |
| GeneYWHAB | AuthorityHGNC:12849 | Mapping file id7529 NCBI file | EvidenceTAS |
| GeneZDHHC9 | AuthorityHGNC:18475 | Mapping file id51114 NCBI file | EvidenceTAS |
Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.
- Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.