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Pathway Human Homo sapiens

Response to elevated platelet cytosolic Ca2+

R-HSA-76005 in Reactome release 97: under Platelet activation, signaling and aggregation, with 134 genes placed in it by the mapping files and 2 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-76005 (mouse), R-RNO-76005 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 134 genes in this human pathway; showing 101 to 134, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 2 of 2
GeneSERPINE1AuthorityHGNC:8583Mapping file id5054 NCBI fileEvidenceTAS
GeneSERPINF2AuthorityHGNC:9075Mapping file id5345 NCBI fileEvidenceTAS
GeneSERPING1AuthorityHGNC:1228Mapping file id710 NCBI fileEvidenceTAS
GeneSOD1AuthorityHGNC:11179Mapping file id6647 NCBI fileEvidenceTAS
GeneSPARCAuthorityHGNC:11219Mapping file id6678 NCBI fileEvidenceTAS
GeneSPP2AuthorityHGNC:11256Mapping file id6694 NCBI fileEvidenceTAS
GeneSRGNAuthorityHGNC:9361Mapping file id5552 NCBI fileEvidenceTAS
GeneSTX4AuthorityHGNC:11439Mapping file id6810 NCBI fileEvidenceTAS
GeneSTXBP2AuthorityHGNC:11445Mapping file id6813 NCBI fileEvidenceTAS
GeneSTXBP3AuthorityHGNC:11446Mapping file id6814 NCBI fileEvidenceTAS
GeneSYTL4AuthorityHGNC:15588Mapping file id94121 NCBI fileEvidenceTAS
GeneTAGLN2AuthorityHGNC:11554Mapping file id8407 NCBI fileEvidenceTAS
GeneTEX264AuthorityHGNC:30247Mapping file id51368 NCBI fileEvidenceTAS
GeneTFAuthorityHGNC:11740Mapping file id7018 NCBI fileEvidenceTAS
GeneTGFB1AuthorityHGNC:11766Mapping file id7040 NCBI fileEvidenceTAS
GeneTGFB2AuthorityHGNC:11768Mapping file id7042 NCBI fileEvidenceTAS
GeneTGFB3AuthorityHGNC:11769Mapping file id7043 NCBI fileEvidenceTAS
GeneTHBS1AuthorityHGNC:11785Mapping file id7057 NCBI fileEvidenceTAS
GeneTIMP1AuthorityHGNC:11820Mapping file id7076 NCBI fileEvidenceTAS
GeneTIMP3AuthorityHGNC:11822Mapping file id7078 NCBI fileEvidenceTAS
GeneTLN1AuthorityHGNC:11845Mapping file id7094 NCBI fileEvidenceTAS
GeneTMSB4XAuthorityHGNC:11881Mapping file id7114 NCBI fileEvidenceTAS
GeneTMX3AuthorityHGNC:24718Mapping file id54495 NCBI fileEvidenceTAS
GeneTOR4AAuthorityHGNC:25981Mapping file id54863 NCBI fileEvidenceTAS
GeneTTNAuthorityHGNC:12403Mapping file id7273 NCBI fileEvidenceTAS
GeneTUBA4AAuthorityHGNC:12407Mapping file id7277 NCBI fileEvidenceTAS
GeneVCLAuthorityHGNC:12665Mapping file id7414 NCBI fileEvidenceTAS
GeneVEGFAAuthorityHGNC:12680Mapping file id7422 NCBI fileEvidenceTAS
GeneVEGFBAuthorityHGNC:12681Mapping file id7423 NCBI fileEvidenceTAS
GeneVEGFCAuthorityHGNC:12682Mapping file id7424 NCBI fileEvidenceTAS
GeneVEGFDAuthorityHGNC:3708Mapping file id2277 NCBI fileEvidenceTAS
GeneVTI1BAuthorityHGNC:17793Mapping file id10490 NCBI fileEvidenceTAS
GeneVWFAuthorityHGNC:12726Mapping file id7450 NCBI fileEvidenceTAS
GeneWDR1AuthorityHGNC:12754Mapping file id9948 NCBI fileEvidenceTAS

Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.