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Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

PIP3 activates AKT signaling

R-MMU-1257604 in Reactome release 97: under Intracellular signaling by second messengers, with 235 genes placed in it by the mapping files and 4 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-1257604 (human), R-RNO-1257604 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 235 genes in this mouse pathway; showing 101 to 200, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 2 of 3
GeneMapk3Authority26417Mapping file id26417 NCBI fileEvidenceIEA
GeneMapkap1Authority227743Mapping file id227743 NCBI fileEvidenceIEA
GeneMbd3Authority17192Mapping file id17192 NCBI fileEvidenceIEA
GeneMdm2Authority17246Mapping file id17246 NCBI fileEvidenceIEA
GeneMecomAuthority14013Mapping file id14013 NCBI fileEvidenceIEA
GeneMetAuthority17295Mapping file idENSMUSG00000009376 Ensembl fileEvidenceIEA
GeneMkrn1Authority54484Mapping file idENSMUSG00000029922 Ensembl fileEvidenceIEA
GeneMlst8Authority56716Mapping file id56716 NCBI fileEvidenceIEA
GeneMta1Authority116870Mapping file id116870 NCBI fileEvidenceIEA
GeneMta2Authority23942Mapping file id23942 NCBI fileEvidenceIEA
GeneMta3Authority116871Mapping file id116871 NCBI fileEvidenceIEA
GeneMtorAuthority56717Mapping file id56717 NCBI fileEvidenceIEA
GeneMyd88Authority17874Mapping file id17874 NCBI fileEvidenceIEA
GeneNedd4Authority17999Mapping file id17999 NCBI fileEvidenceIEA
GeneNr4a1Authority15370Mapping file id15370 NCBI fileEvidenceIEA
GeneNrg1Authority211323Mapping file id211323 NCBI fileEvidenceIEA
GeneNrg3Authority18183Mapping file id18183 NCBI fileEvidenceIEA
GeneNtf3Authority18205Mapping file id18205 NCBI fileEvidenceIEA
GeneNtf5Authority78405Mapping file id78405 NCBI fileEvidenceIEA
GeneNtrk2Authority18212Mapping file id18212 NCBI fileEvidenceIEA
GeneNtrk3Authority18213Mapping file id18213 NCBI fileEvidenceIEA
GeneOtud3Authority73162Mapping file id73162 NCBI fileEvidenceIEA
GenePdgfaAuthority18590Mapping file id18590 NCBI fileEvidenceIEA
GenePdgfbAuthority18591Mapping file id18591 NCBI fileEvidenceIEA
GenePdgfraAuthority18595Mapping file id18595 NCBI fileEvidenceIEA
GenePdgfrbAuthority18596Mapping file id18596 NCBI fileEvidenceIEA
GenePdpk1Authority18607Mapping file id18607 NCBI fileEvidenceIEA
GenePhc1Authority13619Mapping file id13619 NCBI fileEvidenceIEA
GenePhc2Authority54383Mapping file id54383 NCBI fileEvidenceIEA
GenePhc3Authority241915Mapping file id241915 NCBI fileEvidenceIEA
GenePhlpp1Authority98432Mapping file id98432 NCBI fileEvidenceIEA
GenePhlpp2Authority244650Mapping file id244650 NCBI fileEvidenceIEA
GenePik3ap1Authority83490Mapping file id83490 NCBI fileEvidenceIEA
GenePik3caAuthority18706Mapping file id18706 NCBI fileEvidenceIEA
GenePik3cbAuthority74769Mapping file id74769 NCBI fileEvidenceIEA
GenePik3cdAuthority18707Mapping file id18707 NCBI fileEvidenceIEA
GenePik3cgAuthority30955Mapping file id30955 NCBI fileEvidenceIEA
GenePik3r1Authority18708Mapping file id18708 NCBI fileEvidenceIEA
GenePik3r2Authority18709Mapping file id18709 NCBI fileEvidenceIEA
GenePik3r3Authority18710Mapping file id18710 NCBI fileEvidenceIEA
GenePik3r5Authority320207Mapping file id320207 NCBI fileEvidenceIEA
GenePik3r6Authority104709Mapping file id104709 NCBI fileEvidenceIEA
GenePip4k2aAuthority18718Mapping file id18718 NCBI fileEvidenceIEA
GenePip4k2bAuthority108083Mapping file id108083 NCBI fileEvidenceIEA
GenePip4k2cAuthority117150Mapping file id117150 NCBI fileEvidenceIEA
GenePip5k1aAuthority18720Mapping file id18720 NCBI fileEvidenceIEA
GenePip5k1bAuthority18719Mapping file id18719 NCBI fileEvidenceIEA
GenePip5k1cAuthority18717Mapping file id18717 NCBI fileEvidenceIEA
GenePmlAuthority18854Mapping file id18854 NCBI fileEvidenceIEA
GenePpp2caAuthority19052Mapping file id19052 NCBI fileEvidenceIEA
GenePpp2cbAuthority19053Mapping file id19053 NCBI fileEvidenceIEA
GenePpp2r1aAuthority51792Mapping file id51792 NCBI fileEvidenceIEA
GenePpp2r1bAuthority73699Mapping file id73699 NCBI fileEvidenceIEA
GenePpp2r5aAuthority226849Mapping file id226849 NCBI fileEvidenceIEA
GenePpp2r5bAuthority225849Mapping file id225849 NCBI fileEvidenceIEA
GenePpp2r5cAuthority26931Mapping file id26931 NCBI fileEvidenceIEA
GenePpp2r5dAuthority21770Mapping file id21770 NCBI fileEvidenceIEA
GenePpp2r5eAuthority26932Mapping file id26932 NCBI fileEvidenceIEA
GenePrex2Authority109294Mapping file id109294 NCBI fileEvidenceIEA
GenePrr5Authority109270Mapping file id109270 NCBI fileEvidenceIEA
GenePsma1Authority26440Mapping file id26440 NCBI fileEvidenceIEA
GenePsma2Authority19166Mapping file id19166 NCBI fileEvidenceIEA
GenePsma3Authority19167Mapping file id19167 NCBI fileEvidenceIEA
GenePsma4Authority26441Mapping file id26441 NCBI fileEvidenceIEA
GenePsma5Authority26442Mapping file id26442 NCBI fileEvidenceIEA
GenePsma6Authority26443Mapping file id26443 NCBI fileEvidenceIEA
GenePsma7Authority26444Mapping file id26444 NCBI fileEvidenceIEA
GenePsmb1Authority19170Mapping file id19170 NCBI fileEvidenceIEA
GenePsmb2Authority26445Mapping file id26445 NCBI fileEvidenceIEA
GenePsmb3Authority26446Mapping file id26446 NCBI fileEvidenceIEA
GenePsmb4Authority19172Mapping file id19172 NCBI fileEvidenceIEA
GenePsmb5Authority19173Mapping file id19173 NCBI fileEvidenceIEA
GenePsmb6Authority19175Mapping file id19175 NCBI fileEvidenceIEA
GenePsmb7Authority19177Mapping file id19177 NCBI fileEvidenceIEA
GenePsmc1Authority19179Mapping file id19179 NCBI fileEvidenceIEA
GenePsmc2Authority19181Mapping file id19181 NCBI fileEvidenceIEA
GenePsmc3Authority19182Mapping file id19182 NCBI fileEvidenceIEA
GenePsmc4Authority23996Mapping file id23996 NCBI fileEvidenceIEA
GenePsmc5Authority19184Mapping file id19184 NCBI fileEvidenceIEA
GenePsmc6Authority67089Mapping file id67089 NCBI fileEvidenceIEA
GenePsmd1Authority70247Mapping file id70247 NCBI fileEvidenceIEA
GenePsmd11Authority69077Mapping file id69077 NCBI fileEvidenceIEA
GenePsmd12Authority66997Mapping file id66997 NCBI fileEvidenceIEA
GenePsmd13Authority23997Mapping file id23997 NCBI fileEvidenceIEA
GenePsmd14Authority59029Mapping file id59029 NCBI fileEvidenceIEA
GenePsmd2Authority21762Mapping file id21762 NCBI fileEvidenceIEA
GenePsmd3Authority22123Mapping file id22123 NCBI fileEvidenceIEA
GenePsmd6Authority66413Mapping file id66413 NCBI fileEvidenceIEA
GenePsmd7Authority17463Mapping file id17463 NCBI fileEvidenceIEA
GenePsmd8Authority57296Mapping file id57296 NCBI fileEvidenceIEA
GenePtenAuthority19211Mapping file id19211 NCBI fileEvidenceIEA
GenePtpn11Authority19247Mapping file id19247 NCBI fileEvidenceIEA
GeneRac1Authority19353Mapping file id19353 NCBI fileEvidenceIEA
GeneRac2Authority19354Mapping file id19354 NCBI fileEvidenceIEA
GeneRbbp4Authority19646Mapping file id19646 NCBI fileEvidenceIEA
GeneRbbp7Authority245688Mapping file id245688 NCBI fileEvidenceIEA
GeneRhebAuthority19744Mapping file id19744 NCBI fileEvidenceIEA
GeneRhogAuthority56212Mapping file id56212 NCBI fileEvidenceIEA
GeneRictorAuthority78757Mapping file id78757 NCBI fileEvidenceIEA
GeneRing1Authority19763Mapping file id19763 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.