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Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

SUMO E3 ligases SUMOylate target proteins

R-MMU-3108232 in Reactome release 97: under SUMOylation, with 160 genes placed in it by the mapping files and 12 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-3108232 (human), R-RNO-3108232 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 160 genes in this mouse pathway; showing 101 to 160, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 2 of 2
GenePhc1Authority13619Mapping file id13619 NCBI fileEvidenceIEA
GenePhc2Authority54383Mapping file id54383 NCBI fileEvidenceIEA
GenePhc3Authority241915Mapping file id241915 NCBI fileEvidenceIEA
GenePias1Authority56469Mapping file id56469 NCBI fileEvidenceIEA
GenePias2Authority17344Mapping file id17344 NCBI fileEvidenceIEA
GenePias3Authority229615Mapping file id229615 NCBI fileEvidenceIEA
GenePias4Authority59004Mapping file id59004 NCBI fileEvidenceIEA
GenePmlAuthority18854Mapping file id18854 NCBI fileEvidenceIEA
GenePom121Authority107939Mapping file id107939 NCBI fileEvidenceIEA
GenePparaAuthority19013Mapping file id19013 NCBI fileEvidenceIEA
GeneRad21Authority19357Mapping file id19357 NCBI fileEvidenceIEA
GeneRad52Authority19365Mapping file id19365 NCBI fileEvidenceIEA
GeneRae1Authority66679Mapping file id66679 NCBI fileEvidenceIEA
GeneRanbp2Authority19386Mapping file id19386 NCBI fileEvidenceIEA
GeneRangap1Authority19387Mapping file id19387 NCBI fileEvidenceIEA
GeneRaraAuthority19401Mapping file id19401 NCBI fileEvidenceIEA
GeneRelaAuthority19697Mapping file id19697 NCBI fileEvidenceIEA
GeneRing1Authority19763Mapping file id19763 NCBI fileEvidenceIEA
GeneRnf168Authority70238Mapping file id70238 NCBI fileEvidenceIEA
GeneRnf2Authority19821Mapping file id19821 NCBI fileEvidenceIEA
GeneRoraAuthority19883Mapping file id19883 NCBI fileEvidenceIEA
GeneRpa1Authority68275Mapping file id68275 NCBI fileEvidenceIEA
GeneRxraAuthority20181Mapping file id20181 NCBI fileEvidenceIEA
GeneSafbAuthority224903Mapping file id224903 NCBI fileEvidenceIEA
GeneSatb1Authority20230Mapping file id20230 NCBI fileEvidenceIEA
GeneSatb2Authority212712Mapping file id212712 NCBI fileEvidenceIEA
GeneScmh1Authority29871Mapping file id29871 NCBI fileEvidenceIEA
GeneSec13Authority110379Mapping file id110379 NCBI fileEvidenceIEA
GeneSeh1lAuthority72124Mapping file id72124 NCBI fileEvidenceIEA
GeneSin3aAuthority20466Mapping file id20466 NCBI fileEvidenceIEA
GeneSmc1aAuthority24061Mapping file id24061 NCBI fileEvidenceIEA
GeneSmc3Authority13006Mapping file id13006 NCBI fileEvidenceIEA
GeneSmc5Authority226026Mapping file id226026 NCBI fileEvidenceIEA
GeneSmc6Authority67241Mapping file id67241 NCBI fileEvidenceIEA
GeneSp140l2Authority620078Mapping file id620078 NCBI fileEvidenceIEA
GeneSp3Authority20687Mapping file id20687 NCBI fileEvidenceIEA
GeneStag1Authority20842Mapping file id20842 NCBI fileEvidenceIEA
GeneStag2Authority20843Mapping file id20843 NCBI fileEvidenceIEA
GeneSumo1Authority22218Mapping file id22218 NCBI fileEvidenceIEA
GeneSumo2Authority170930Mapping file id170930 NCBI fileEvidenceIEA
GeneSumo3Authority20610Mapping file id20610 NCBI fileEvidenceIEA
GeneSuz12Authority52615Mapping file id52615 NCBI fileEvidenceIEA
GeneTdgAuthority21665Mapping file id21665 NCBI fileEvidenceIEA
GeneTfap2cAuthority21420Mapping file id21420 NCBI fileEvidenceIEA
GeneThraAuthority21833Mapping file id21833 NCBI fileEvidenceIEA
GeneThrbAuthority21834Mapping file id21834 NCBI fileEvidenceIEA
GeneTop1Authority21969Mapping file id21969 NCBI fileEvidenceIEA
GeneTop2aAuthority21973Mapping file id21973 NCBI fileEvidenceIEA
GeneTop2bAuthority21974Mapping file id21974 NCBI fileEvidenceIEA
GeneToporsAuthority106021Mapping file id106021 NCBI fileEvidenceIEA
GeneTprAuthority108989Mapping file id108989 NCBI fileEvidenceIEA
GeneTrim27Authority19720Mapping file id19720 NCBI fileEvidenceIEA
GeneTrp53bp1Authority27223Mapping file id27223 NCBI fileEvidenceIEA
GeneUbe2iAuthority22196Mapping file id22196 NCBI fileEvidenceIEA
GeneUhrf2Authority109113Mapping file id109113 NCBI fileEvidenceIEA
GeneVdrAuthority22337Mapping file id22337 NCBI fileEvidenceIEA
GeneVhlAuthority22346Mapping file id22346 NCBI fileEvidenceIEA
GeneXpcAuthority22591Mapping file id22591 NCBI fileEvidenceIEA
GeneXrcc4Authority108138Mapping file id108138 NCBI fileEvidenceIEA
GeneZbtb35Authority72465Mapping file id72465 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.