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Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Beta-catenin independent WNT signaling

R-MMU-3858494 in Reactome release 97: under Signaling by WNT, with 112 genes placed in it by the mapping files and 2 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-3858494 (human), R-RNO-3858494 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 112 genes in this mouse pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 1 of 2
GeneAdrm1Authority56436Mapping file id56436 NCBI fileEvidenceIEA
GeneAp2a1Authority11771Mapping file id11771 NCBI fileEvidenceIEA
GeneAp2a2Authority11772Mapping file id11772 NCBI fileEvidenceIEA
GeneAp2b1Authority71770Mapping file id71770 NCBI fileEvidenceIEA
GeneAp2m1Authority11773Mapping file id11773 NCBI fileEvidenceIEA
GeneAp2s1Authority232910Mapping file id232910 NCBI fileEvidenceIEA
GeneArrb2Authority216869Mapping file id216869 NCBI fileEvidenceIEA
GeneCalm1Authority12313Mapping file id12313 NCBI fileEvidenceIEA
GeneCalm2Authority12314Mapping file idENSMUSG00000036438 Ensembl fileEvidenceIEA
GeneCalm3Authority12315Mapping file idENSMUSG00000019370 Ensembl fileEvidenceIEA
GeneCamk2aAuthority12322Mapping file id12322 NCBI fileEvidenceIEA
GeneCltaAuthority12757Mapping file idENSMUSG00000028478 Ensembl fileEvidenceIEA
GeneCltbAuthority74325Mapping file id74325 NCBI fileEvidenceIEA
GeneCltcAuthority67300Mapping file id67300 NCBI fileEvidenceIEA
GeneCtnnb1Authority12387Mapping file id12387 NCBI fileEvidenceIEA
GeneDaam1Authority208846Mapping file id208846 NCBI fileEvidenceIEA
GeneDvl1Authority13542Mapping file id13542 NCBI fileEvidenceIEA
GeneDvl2Authority13543Mapping file id13543 NCBI fileEvidenceIEA
GeneDvl3Authority13544Mapping file id13544 NCBI fileEvidenceIEA
GeneFzd1Authority14362Mapping file id14362 NCBI fileEvidenceIEA
GeneFzd2Authority57265Mapping file id57265 NCBI fileEvidenceIEA
GeneFzd3Authority14365Mapping file id14365 NCBI fileEvidenceIEA
GeneFzd4Authority14366Mapping file id14366 NCBI fileEvidenceIEA
GeneFzd5Authority14367Mapping file id14367 NCBI fileEvidenceIEA
GeneFzd6Authority14368Mapping file id14368 NCBI fileEvidenceIEA
GeneFzd7Authority14369Mapping file id14369 NCBI fileEvidenceIEA
GeneFzd8Authority14370Mapping file id14370 NCBI fileEvidenceIEA
GeneGnao1Authority14681Mapping file id14681 NCBI fileEvidenceIEA
GeneGnat2Authority14686Mapping file id14686 NCBI fileEvidenceIEA
GeneGnb1Authority14688Mapping file id14688 NCBI fileEvidenceIEA
GeneGnb2Authority14693Mapping file id14693 NCBI fileEvidenceIEA
GeneGnb3Authority14695Mapping file id14695 NCBI fileEvidenceIEA
GeneGnb4Authority14696Mapping file id14696 NCBI fileEvidenceIEA
GeneGnb5Authority14697Mapping file id14697 NCBI fileEvidenceIEA
GeneGng10Authority14700Mapping file id14700 NCBI fileEvidenceIEA
GeneGng11Authority66066Mapping file id66066 NCBI fileEvidenceIEA
GeneGng12Authority14701Mapping file id14701 NCBI fileEvidenceIEA
GeneGng13Authority64337Mapping file id64337 NCBI fileEvidenceIEA
GeneGng2Authority14702Mapping file id14702 NCBI fileEvidenceIEA
GeneGng3Authority14704Mapping file id14704 NCBI fileEvidenceIEA
GeneGng4Authority14706Mapping file id14706 NCBI fileEvidenceIEA
GeneGng5Authority14707Mapping file id14707 NCBI fileEvidenceIEA
GeneGng7Authority14708Mapping file id14708 NCBI fileEvidenceIEA
GeneGng8Authority14709Mapping file id14709 NCBI fileEvidenceIEA
GeneGngt1Authority14699Mapping file id14699 NCBI fileEvidenceIEA
GeneGngt2Authority14710Mapping file id14710 NCBI fileEvidenceIEA
GeneKrasAuthority16653Mapping file id16653 NCBI fileEvidenceIEA
GeneLef1Authority16842Mapping file id16842 NCBI fileEvidenceIEA
GeneMap3k7Authority26409Mapping file id26409 NCBI fileEvidenceIEA
GeneNlkAuthority18099Mapping file id18099 NCBI fileEvidenceIEA
GenePard6aAuthority56513Mapping file id56513 NCBI fileEvidenceIEA
GenePde6bAuthority18587Mapping file id18587 NCBI fileEvidenceIEA
GenePde6gAuthority18588Mapping file id18588 NCBI fileEvidenceIEA
GenePfn1Authority18643Mapping file id18643 NCBI fileEvidenceIEA
GenePlcb1Authority18795Mapping file id18795 NCBI fileEvidenceIEA
GenePlcb2Authority18796Mapping file id18796 NCBI fileEvidenceIEA
GenePlcb3Authority18797Mapping file id18797 NCBI fileEvidenceIEA
GenePpp3caAuthority19055Mapping file id19055 NCBI fileEvidenceIEA
GenePpp3cbAuthority19056Mapping file id19056 NCBI fileEvidenceIEA
GenePpp3r1Authority19058Mapping file id19058 NCBI fileEvidenceIEA
GenePrickle1Authority106042Mapping file id106042 NCBI fileEvidenceIEA
GenePrkcaAuthority18750Mapping file id18750 NCBI fileEvidenceIEA
GenePrkcbAuthority18751Mapping file id18751 NCBI fileEvidenceIEA
GenePrkcgAuthority18752Mapping file id18752 NCBI fileEvidenceIEA
GenePsma1Authority26440Mapping file id26440 NCBI fileEvidenceIEA
GenePsma2Authority19166Mapping file id19166 NCBI fileEvidenceIEA
GenePsma3Authority19167Mapping file id19167 NCBI fileEvidenceIEA
GenePsma4Authority26441Mapping file id26441 NCBI fileEvidenceIEA
GenePsma5Authority26442Mapping file id26442 NCBI fileEvidenceIEA
GenePsma6Authority26443Mapping file id26443 NCBI fileEvidenceIEA
GenePsma7Authority26444Mapping file id26444 NCBI fileEvidenceIEA
GenePsmb1Authority19170Mapping file id19170 NCBI fileEvidenceIEA
GenePsmb2Authority26445Mapping file id26445 NCBI fileEvidenceIEA
GenePsmb3Authority26446Mapping file id26446 NCBI fileEvidenceIEA
GenePsmb4Authority19172Mapping file id19172 NCBI fileEvidenceIEA
GenePsmb5Authority19173Mapping file id19173 NCBI fileEvidenceIEA
GenePsmb6Authority19175Mapping file id19175 NCBI fileEvidenceIEA
GenePsmb7Authority19177Mapping file id19177 NCBI fileEvidenceIEA
GenePsmc1Authority19179Mapping file id19179 NCBI fileEvidenceIEA
GenePsmc2Authority19181Mapping file id19181 NCBI fileEvidenceIEA
GenePsmc3Authority19182Mapping file id19182 NCBI fileEvidenceIEA
GenePsmc4Authority23996Mapping file id23996 NCBI fileEvidenceIEA
GenePsmc5Authority19184Mapping file id19184 NCBI fileEvidenceIEA
GenePsmc6Authority67089Mapping file id67089 NCBI fileEvidenceIEA
GenePsmd1Authority70247Mapping file id70247 NCBI fileEvidenceIEA
GenePsmd11Authority69077Mapping file id69077 NCBI fileEvidenceIEA
GenePsmd12Authority66997Mapping file id66997 NCBI fileEvidenceIEA
GenePsmd13Authority23997Mapping file id23997 NCBI fileEvidenceIEA
GenePsmd14Authority59029Mapping file id59029 NCBI fileEvidenceIEA
GenePsmd2Authority21762Mapping file id21762 NCBI fileEvidenceIEA
GenePsmd3Authority22123Mapping file id22123 NCBI fileEvidenceIEA
GenePsmd6Authority66413Mapping file id66413 NCBI fileEvidenceIEA
GenePsmd7Authority17463Mapping file id17463 NCBI fileEvidenceIEA
GenePsmd8Authority57296Mapping file id57296 NCBI fileEvidenceIEA
GeneRac1Authority19353Mapping file id19353 NCBI fileEvidenceIEA
GeneRac2Authority19354Mapping file id19354 NCBI fileEvidenceIEA
GeneRac3Authority170758Mapping file id170758 NCBI fileEvidenceIEA
GeneRhoaAuthority11848Mapping file id11848 NCBI fileEvidenceIEA
GeneRor1Authority26563Mapping file id26563 NCBI fileEvidenceIEA
GeneRps27aAuthority78294Mapping file id78294 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.