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Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by FGFR2

R-MMU-5654738 in Reactome release 97: under Signaling by FGFR, with 63 genes placed in it by the mapping files and 4 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-5654738 (human), R-RNO-5654738 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 63 genes in this mouse pathway; showing 1 to 63, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 1 of 1
GeneBrafAuthority109880Mapping file id109880 NCBI fileEvidenceIEA
GeneCblAuthority12402Mapping file id12402 NCBI fileEvidenceIEA
GeneFgf1Authority14164Mapping file id14164 NCBI fileEvidenceIEA
GeneFgf10Authority14165Mapping file id14165 NCBI fileEvidenceIEA
GeneFgf16Authority80903Mapping file id80903 NCBI fileEvidenceIEA
GeneFgf17Authority14171Mapping file id14171 NCBI fileEvidenceIEA
GeneFgf18Authority14172Mapping file id14172 NCBI fileEvidenceIEA
GeneFgf2Authority14173Mapping file id14173 NCBI fileEvidenceIEA
GeneFgf20Authority80857Mapping file id80857 NCBI fileEvidenceIEA
GeneFgf22Authority67112Mapping file id67112 NCBI fileEvidenceIEA
GeneFgf23Authority64654Mapping file id64654 NCBI fileEvidenceIEA
GeneFgf3Authority14174Mapping file idENSMUSG00000031074 Ensembl fileEvidenceIEA
GeneFgf4Authority14175Mapping file id14175 NCBI fileEvidenceIEA
GeneFgf5Authority14176Mapping file id14176 NCBI fileEvidenceIEA
GeneFgf6Authority14177Mapping file id14177 NCBI fileEvidenceIEA
GeneFgf7Authority14178Mapping file id14178 NCBI fileEvidenceIEA
GeneFgf8Authority14179Mapping file id14179 NCBI fileEvidenceIEA
GeneFgf9Authority14180Mapping file id14180 NCBI fileEvidenceIEA
GeneFgfbp1Authority14181Mapping file id14181 NCBI fileEvidenceIEA
GeneFgfbp3Authority72514Mapping file id72514 NCBI fileEvidenceIEA
GeneFgfr2Authority14183Mapping file id14183 NCBI fileEvidenceIEA
GeneFrs2Authority327826Mapping file id327826 NCBI fileEvidenceIEA
GeneFrs3Authority107971Mapping file id107971 NCBI fileEvidenceIEA
GeneGab1Authority14388Mapping file id14388 NCBI fileEvidenceIEA
GeneGrb2Authority14784Mapping file id14784 NCBI fileEvidenceIEA
GeneGtf2f1Authority98053Mapping file id98053 NCBI fileEvidenceIEA
GeneGtf2f2Authority68705Mapping file id68705 NCBI fileEvidenceIEA
GeneHnrnpa1Authority15382Mapping file id15382 NCBI fileEvidenceIEA
GeneHrasAuthority15461Mapping file id15461 NCBI fileEvidenceIEA
GeneKrasAuthority16653Mapping file id16653 NCBI fileEvidenceIEA
GeneMapk1Authority26413Mapping file id26413 NCBI fileEvidenceIEA
GeneMapk3Authority26417Mapping file id26417 NCBI fileEvidenceIEA
GeneMknk1Authority17346Mapping file id17346 NCBI fileEvidenceIEA
GeneNcbp1Authority433702Mapping file id433702 NCBI fileEvidenceIEA
GeneNcbp2Authority68092Mapping file id68092 NCBI fileEvidenceIEA
GenePik3caAuthority18706Mapping file id18706 NCBI fileEvidenceIEA
GenePik3r1Authority18708Mapping file id18708 NCBI fileEvidenceIEA
GenePlcg1Authority18803Mapping file id18803 NCBI fileEvidenceIEA
GenePolr2aAuthority20020Mapping file id20020 NCBI fileEvidenceIEA
GenePolr2bAuthority231329Mapping file id231329 NCBI fileEvidenceIEA
GenePolr2cAuthority20021Mapping file id20021 NCBI fileEvidenceIEA
GenePolr2dAuthority69241Mapping file id69241 NCBI fileEvidenceIEA
GenePolr2eAuthority66420Mapping file id66420 NCBI fileEvidenceIEA
GenePolr2fAuthority69833Mapping file id69833 NCBI fileEvidenceIEA
GenePolr2gAuthority67710Mapping file id67710 NCBI fileEvidenceIEA
GenePolr2hAuthority245841Mapping file id245841 NCBI fileEvidenceIEA
GenePolr2iAuthority69920Mapping file id69920 NCBI fileEvidenceIEA
GenePolr2kAuthority17749Mapping file id17749 NCBI fileEvidenceIEA
GenePolr2lAuthority66491Mapping file id66491 NCBI fileEvidenceIEA
GenePpp2caAuthority19052Mapping file id19052 NCBI fileEvidenceIEA
GenePpp2cbAuthority19053Mapping file id19053 NCBI fileEvidenceIEA
GenePpp2r1aAuthority51792Mapping file id51792 NCBI fileEvidenceIEA
GenePtbp1Authority19205Mapping file id19205 NCBI fileEvidenceIEA
GenePtpn11Authority19247Mapping file id19247 NCBI fileEvidenceIEA
GeneRps27aAuthority78294Mapping file id78294 NCBI fileEvidenceIEA
GeneShc1Authority20416Mapping file id20416 NCBI fileEvidenceIEA
GeneSos1Authority20662Mapping file id20662 NCBI fileEvidenceIEA
GeneSpry2Authority24064Mapping file id24064 NCBI fileEvidenceIEA
GeneSrcAuthority20779Mapping file id20779 NCBI fileEvidenceIEA
GeneUba52Authority22186Mapping file id22186 NCBI fileEvidenceIEA
GeneUba52rtAuthority666586Mapping file idENSMUSG00000068240 Ensembl fileEvidenceIEA
GeneUbbAuthority22187Mapping file id22187 NCBI fileEvidenceIEA
GeneUbcAuthority22190Mapping file id22190 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.