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Order

Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

RAB GEFs exchange GTP for GDP on RABs

R-MMU-8876198 in Reactome release 97: under Rab regulation of trafficking, with 89 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-8876198 (human), R-RNO-8876198 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 89 genes in this mouse pathway; showing 1 to 89, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 1 of 1
GeneAkt1Authority11651Mapping file id11651 NCBI fileEvidenceIEA
GeneAkt2Authority11652Mapping file id11652 NCBI fileEvidenceIEA
GeneAkt3Authority23797Mapping file id23797 NCBI fileEvidenceIEA
GeneAls2Authority74018Mapping file id74018 NCBI fileEvidenceIEA
GeneAls2clAuthority235633Mapping file id235633 NCBI fileEvidenceIEA
GeneAnkrd27Authority245886Mapping file id245886 NCBI fileEvidenceIEA
GeneCcz1Authority231874Mapping file id231874 NCBI fileEvidenceIEA
GeneChmAuthority12662Mapping file idENSMUSG00000025531 Ensembl fileEvidenceIEA
GeneChmlAuthority12663Mapping file id12663 NCBI fileEvidenceIEA
GeneDennd1aAuthority227801Mapping file id227801 NCBI fileEvidenceIEA
GeneDennd1bAuthority329260Mapping file id329260 NCBI fileEvidenceIEA
GeneDennd1cAuthority70785Mapping file id70785 NCBI fileEvidenceIEA
GeneDennd2aAuthority209773Mapping file id209773 NCBI fileEvidenceIEA
GeneDennd2bAuthority76954Mapping file id76954 NCBI fileEvidenceIEA
GeneDennd2cAuthority329727Mapping file idENSMUSG00000007379 Ensembl fileEvidenceIEA
GeneDennd2dAuthority72121Mapping file id72121 NCBI fileEvidenceIEA
GeneDennd3Authority105841Mapping file id105841 NCBI fileEvidenceIEA
GeneDennd4aAuthority102442Mapping file id102442 NCBI fileEvidenceIEA
GeneDennd4bAuthority229541Mapping file id229541 NCBI fileEvidenceIEA
GeneDennd4cAuthority329877Mapping file id329877 NCBI fileEvidenceIEA
GeneDennd5aAuthority19347Mapping file id19347 NCBI fileEvidenceIEA
GeneDennd5bAuthority320560Mapping file id320560 NCBI fileEvidenceIEA
GeneDennd6aAuthority211922Mapping file id211922 NCBI fileEvidenceIEA
GeneDennd6bAuthority69440Mapping file id69440 NCBI fileEvidenceIEA
GeneGapvd1Authority66691Mapping file id66691 NCBI fileEvidenceIEA
GeneGdi1Authority14567Mapping file id14567 NCBI fileEvidenceIEA
GeneGdi2Authority14569Mapping file id14569 NCBI fileEvidenceIEA
GeneHps1Authority192236Mapping file id192236 NCBI fileEvidenceIEA
GeneHps4Authority192232Mapping file id192232 NCBI fileEvidenceIEA
GeneMaddAuthority228355Mapping file id228355 NCBI fileEvidenceIEA
GeneMon1aAuthority72825Mapping file id72825 NCBI fileEvidenceIEA
GeneMon1bAuthority270096Mapping file id270096 NCBI fileEvidenceIEA
GeneRab10Authority19325Mapping file id19325 NCBI fileEvidenceIEA
GeneRab12Authority19328Mapping file id19328 NCBI fileEvidenceIEA
GeneRab13Authority68328Mapping file id68328 NCBI fileEvidenceIEA
GeneRab14Authority68365Mapping file id68365 NCBI fileEvidenceIEA
GeneRab18Authority19330Mapping file id19330 NCBI fileEvidenceIEA
GeneRab1aAuthority19324Mapping file id19324 NCBI fileEvidenceIEA
GeneRab1bAuthority76308Mapping file id76308 NCBI fileEvidenceIEA
GeneRab21Authority216344Mapping file id216344 NCBI fileEvidenceIEA
GeneRab27aAuthority11891Mapping file id11891 NCBI fileEvidenceIEA
GeneRab27bAuthority80718Mapping file id80718 NCBI fileEvidenceIEA
GeneRab31Authority106572Mapping file id106572 NCBI fileEvidenceIEA
GeneRab32Authority67844Mapping file id67844 NCBI fileEvidenceIEA
GeneRab35Authority77407Mapping file id77407 NCBI fileEvidenceIEA
GeneRab38Authority72433Mapping file id72433 NCBI fileEvidenceIEA
GeneRab39aAuthority270160Mapping file id270160 NCBI fileEvidenceIEA
GeneRab39bAuthority67790Mapping file id67790 NCBI fileEvidenceIEA
GeneRab3aAuthority19339Mapping file id19339 NCBI fileEvidenceIEA
GeneRab3gap1Authority226407Mapping file id226407 NCBI fileEvidenceIEA
GeneRab3gap2Authority98732Mapping file id98732 NCBI fileEvidenceIEA
GeneRab3il1Authority74760Mapping file id74760 NCBI fileEvidenceIEA
GeneRab3ipAuthority216363Mapping file id216363 NCBI fileEvidenceIEA
GeneRab5aAuthority271457Mapping file id271457 NCBI fileEvidenceIEA
GeneRab5bAuthority19344Mapping file id19344 NCBI fileEvidenceIEA
GeneRab5cAuthority19345Mapping file id19345 NCBI fileEvidenceIEA
GeneRab6aAuthority19346Mapping file id19346 NCBI fileEvidenceIEA
GeneRab6bAuthority270192Mapping file id270192 NCBI fileEvidenceIEA
GeneRab7Authority19349Mapping file id19349 NCBI fileEvidenceIEA
GeneRab7bAuthority226421Mapping file id226421 NCBI fileEvidenceIEA
GeneRab8aAuthority17274Mapping file id17274 NCBI fileEvidenceIEA
GeneRab8bAuthority235442Mapping file id235442 NCBI fileEvidenceIEA
GeneRab9Authority56382Mapping file id56382 NCBI fileEvidenceIEA
GeneRab9bAuthority319642Mapping file id319642 NCBI fileEvidenceIEA
GeneRabgef1Authority56715Mapping file id56715 NCBI fileEvidenceIEA
GeneRgp1Authority242406Mapping file id242406 NCBI fileEvidenceIEA
GeneRic1Authority226089Mapping file idENSMUSG00000038658 Ensembl fileEvidenceIEA
GeneRin1Authority225870Mapping file id225870 NCBI fileEvidenceIEA
GeneRin2Authority74030Mapping file id74030 NCBI fileEvidenceIEA
GeneRin3Authority217835Mapping file id217835 NCBI fileEvidenceIEA
GeneRinlAuthority320435Mapping file id320435 NCBI fileEvidenceIEA
GeneSbf1Authority77980Mapping file id77980 NCBI fileEvidenceIEA
GeneSbf2Authority319934Mapping file id319934 NCBI fileEvidenceIEA
GeneTrappc1Authority245828Mapping file id245828 NCBI fileEvidenceIEA
GeneTrappc10Authority216131Mapping file id216131 NCBI fileEvidenceIEA
GeneTrappc11Authority320714Mapping file id320714 NCBI fileEvidenceIEA
GeneTrappc12Authority217449Mapping file id217449 NCBI fileEvidenceIEA
GeneTrappc13Authority66975Mapping file id66975 NCBI fileEvidenceIEA
GeneTrappc2Authority66226Mapping file id66226 NCBI fileEvidenceIEA
GeneTrappc2lAuthority59005Mapping file id59005 NCBI fileEvidenceIEA
GeneTrappc3Authority27096Mapping file id27096 NCBI fileEvidenceIEA
GeneTrappc4Authority60409Mapping file id60409 NCBI fileEvidenceIEA
GeneTrappc5Authority66682Mapping file id66682 NCBI fileEvidenceIEA
GeneTrappc6aAuthority67091Mapping file id67091 NCBI fileEvidenceIEA
GeneTrappc6bAuthority78232Mapping file id78232 NCBI fileEvidenceIEA
GeneTrappc8Authority75964Mapping file id75964 NCBI fileEvidenceIEA
GeneTrappc9Authority76510Mapping file id76510 NCBI fileEvidenceIEA
GeneUlk1Authority22241Mapping file id22241 NCBI fileEvidenceIEA
GeneYwhaeAuthority22627Mapping file id22627 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.