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Order

Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

RAC3 GTPase cycle

R-MMU-9013423 in Reactome release 97: under RHO GTPase cycle, with 91 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9013423 (human), R-RNO-9013423 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 91 genes in this mouse pathway; showing 1 to 91, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 1 of 1
GeneAbi1Authority11308Mapping file id11308 NCBI fileEvidenceIEA
GeneAbi2Authority329165Mapping file id329165 NCBI fileEvidenceIEA
GeneAbl2Authority11352Mapping file idENSMUSG00000026596 Ensembl fileEvidenceIEA
GeneAbrAuthority109934Mapping file id109934 NCBI fileEvidenceIEA
GeneAmigo2Authority105827Mapping file id105827 NCBI fileEvidenceIEA
GeneArap2Authority212285Mapping file idENSMUSG00000037999 Ensembl fileEvidenceIEA
GeneArap3Authority106952Mapping file id106952 NCBI fileEvidenceIEA
GeneArhgap1Authority228359Mapping file id228359 NCBI fileEvidenceIEA
GeneArhgap15Authority76117Mapping file id76117 NCBI fileEvidenceIEA
GeneArhgap17Authority70497Mapping file id70497 NCBI fileEvidenceIEA
GeneArhgap21Authority71435Mapping file id71435 NCBI fileEvidenceIEA
GeneArhgap26Authority71302Mapping file id71302 NCBI fileEvidenceIEA
GeneArhgap32Authority330914Mapping file id330914 NCBI fileEvidenceIEA
GeneArhgap35Authority232906Mapping file id232906 NCBI fileEvidenceIEA
GeneArhgap39Authority223666Mapping file id223666 NCBI fileEvidenceIEA
GeneArhgap42Authority71544Mapping file id71544 NCBI fileEvidenceIEA
GeneArhgap5Authority11855Mapping file id11855 NCBI fileEvidenceIEA
GeneArhgap6Authority11856Mapping file id11856 NCBI fileEvidenceIEA
GeneArhgdibAuthority11857Mapping file id11857 NCBI fileEvidenceIEA
GeneBaiap2Authority108100Mapping file id108100 NCBI fileEvidenceIEA
GeneBaiap2l1Authority66898Mapping file id66898 NCBI fileEvidenceIEA
GeneBcrAuthority110279Mapping file id110279 NCBI fileEvidenceIEA
GeneBrk1Authority101314Mapping file id101314 NCBI fileEvidenceIEA
GeneCav1Authority12389Mapping file id12389 NCBI fileEvidenceIEA
GeneCdc42Authority12540Mapping file id12540 NCBI fileEvidenceIEA
GeneCdc42ep1Authority104445Mapping file id104445 NCBI fileEvidenceIEA
GeneCybaAuthority13057Mapping file id13057 NCBI fileEvidenceIEA
GeneCybbAuthority13058Mapping file id13058 NCBI fileEvidenceIEA
GeneCyfip1Authority20430Mapping file id20430 NCBI fileEvidenceIEA
GeneDepdc1bAuthority218581Mapping file id218581 NCBI fileEvidenceIEA
GeneDiaph3Authority56419Mapping file id56419 NCBI fileEvidenceIEA
GeneDock10Authority210293Mapping file id210293 NCBI fileEvidenceIEA
GeneDsg2Authority13511Mapping file id13511 NCBI fileEvidenceIEA
GeneEmdAuthority13726Mapping file id13726 NCBI fileEvidenceIEA
GeneEpha2Authority13836Mapping file id13836 NCBI fileEvidenceIEA
GeneErbinAuthority59079Mapping file id59079 NCBI fileEvidenceIEA
GeneEsyt1Authority23943Mapping file id23943 NCBI fileEvidenceIEA
GeneFermt2Authority218952Mapping file id218952 NCBI fileEvidenceIEA
GeneGarre1Authority233103Mapping file id233103 NCBI fileEvidenceIEA
GeneGit1Authority216963Mapping file id216963 NCBI fileEvidenceIEA
GeneGit2Authority26431Mapping file id26431 NCBI fileEvidenceIEA
GeneItgb1Authority16412Mapping file id16412 NCBI fileEvidenceIEA
GeneJag1Authority16449Mapping file id16449 NCBI fileEvidenceIEA
GeneLamtor1Authority66508Mapping file id66508 NCBI fileEvidenceIEA
GeneLbrAuthority98386Mapping file id98386 NCBI fileEvidenceIEA
GeneLman1Authority70361Mapping file id70361 NCBI fileEvidenceIEA
GeneMcamAuthority84004Mapping file id84004 NCBI fileEvidenceIEA
GeneMcf2Authority109904Mapping file id109904 NCBI fileEvidenceIEA
GeneMpp7Authority75739Mapping file id75739 NCBI fileEvidenceIEA
GeneNcf1Authority17969Mapping file id17969 NCBI fileEvidenceIEA
GeneNcf2Authority17970Mapping file id17970 NCBI fileEvidenceIEA
GeneNcf4Authority17972Mapping file id17972 NCBI fileEvidenceIEA
GeneNckap1Authority50884Mapping file id50884 NCBI fileEvidenceIEA
GeneNckap1lAuthority105855Mapping file id105855 NCBI fileEvidenceIEA
GeneNhsAuthority195727Mapping file id195727 NCBI fileEvidenceIEA
GeneNox1Authority237038Mapping file id237038 NCBI fileEvidenceIEA
GeneNox3Authority224480Mapping file id224480 NCBI fileEvidenceIEA
GeneNoxa1Authority241275Mapping file id241275 NCBI fileEvidenceIEA
GeneNoxo1Authority71893Mapping file id71893 NCBI fileEvidenceIEA
GeneOcrlAuthority320634Mapping file id320634 NCBI fileEvidenceIEA
GeneOphn1Authority94190Mapping file id94190 NCBI fileEvidenceIEA
GenePak1Authority18479Mapping file idENSMUSG00000030774 Ensembl fileEvidenceIEA
GenePak2Authority224105Mapping file id224105 NCBI fileEvidenceIEA
GenePak4Authority70584Mapping file id70584 NCBI fileEvidenceIEA
GenePgrmc2Authority70804Mapping file id70804 NCBI fileEvidenceIEA
GenePik3r1Authority18708Mapping file id18708 NCBI fileEvidenceIEA
GenePik3r2Authority18709Mapping file id18709 NCBI fileEvidenceIEA
GenePrex1Authority277360Mapping file id277360 NCBI fileEvidenceIEA
GeneRab7Authority19349Mapping file id19349 NCBI fileEvidenceIEA
GeneRac3Authority170758Mapping file id170758 NCBI fileEvidenceIEA
GeneRacgap1Authority26934Mapping file id26934 NCBI fileEvidenceIEA
GeneRapgef1Authority107746Mapping file id107746 NCBI fileEvidenceIEA
GeneRbm39Authority170791Mapping file id170791 NCBI fileEvidenceIEA
GeneSlc1a5Authority20514Mapping file idENSMUSG00000001918 Ensembl fileEvidenceIEA
GeneSlitrk3Authority386750Mapping file id386750 NCBI fileEvidenceIEA
GeneSlitrk5Authority75409Mapping file id75409 NCBI fileEvidenceIEA
GeneSnap23Authority20619Mapping file id20619 NCBI fileEvidenceIEA
GeneSrgap2Authority14270Mapping file id14270 NCBI fileEvidenceIEA
GeneStbd1Authority52331Mapping file id52331 NCBI fileEvidenceIEA
GeneSwap70Authority20947Mapping file id20947 NCBI fileEvidenceIEA
GeneSyde1Authority71709Mapping file idENSMUSG00000032714 Ensembl fileEvidenceIEA
GeneTaok3Authority330177Mapping file id330177 NCBI fileEvidenceIEA
GeneTfrcAuthority22042Mapping file id22042 NCBI fileEvidenceIEA
GeneTrioAuthority223435Mapping file id223435 NCBI fileEvidenceIEA
GeneVamp3Authority22319Mapping file id22319 NCBI fileEvidenceIEA
GeneVangl1Authority229658Mapping file id229658 NCBI fileEvidenceIEA
GeneVav2Authority22325Mapping file id22325 NCBI fileEvidenceIEA
GeneVrk2Authority69922Mapping file id69922 NCBI fileEvidenceIEA
GeneWasf1Authority83767Mapping file id83767 NCBI fileEvidenceIEA
GeneWasf2Authority242687Mapping file id242687 NCBI fileEvidenceIEA
GeneYkt6Authority56418Mapping file id56418 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.