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Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Sensory perception of taste

R-MMU-9717189 in Reactome release 97: under Sensory Perception, with 26 genes placed in it by the mapping files and 2 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9717189 (human), R-RNO-9717189 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 26 genes in this mouse pathway; showing 1 to 26, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 1 of 1
GeneGnat3Authority242851Mapping file id242851 NCBI fileEvidenceIEA
GeneGnb1Authority14688Mapping file id14688 NCBI fileEvidenceIEA
GeneGnb3Authority14695Mapping file id14695 NCBI fileEvidenceIEA
GeneGng13Authority64337Mapping file id64337 NCBI fileEvidenceIEA
GeneItpr3Authority16440Mapping file id16440 NCBI fileEvidenceIEA
GeneScnn1aAuthority20276Mapping file id20276 NCBI fileEvidenceIEA
GeneScnn1bAuthority20277Mapping file id20277 NCBI fileEvidenceIEA
GeneScnn1gAuthority20278Mapping file id20278 NCBI fileEvidenceIEA
GeneTas1r1Authority110326Mapping file id110326 NCBI fileEvidenceIEA
GeneTas1r2Authority83770Mapping file id83770 NCBI fileEvidenceIEA
GeneTas1r3Authority83771Mapping file id83771 NCBI fileEvidenceIEA
GeneTas2r105Authority57252Mapping file id57252 NCBI fileEvidenceIEA
GeneTas2r107Authority387342Mapping file id387342 NCBI fileEvidenceIEA
GeneTas2r108Authority57253Mapping file id57253 NCBI fileEvidenceIEA
GeneTas2r118Authority387347Mapping file id387347 NCBI fileEvidenceIEA
GeneTas2r119Authority57254Mapping file id57254 NCBI fileEvidenceIEA
GeneTas2r120Authority387348Mapping file id387348 NCBI fileEvidenceIEA
GeneTas2r121Authority387349Mapping file id387349 NCBI fileEvidenceIEA
GeneTas2r126Authority387353Mapping file id387353 NCBI fileEvidenceIEA
GeneTas2r130Authority387355Mapping file id387355 NCBI fileEvidenceIEA
GeneTas2r136Authority353165Mapping file id353165 NCBI fileEvidenceIEA
GeneTas2r137Authority574417Mapping file id574417 NCBI fileEvidenceIEA
GeneTas2r138Authority387513Mapping file id387513 NCBI fileEvidenceIEA
GeneTas2r139Authority353148Mapping file id353148 NCBI fileEvidenceIEA
GeneTas2r140Authority387616Mapping file id387616 NCBI fileEvidenceIEA
GeneTas2r144Authority387515Mapping file id387515 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.