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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Neurotransmitter receptors and postsynaptic signal transmission

R-RNO-112314 in Reactome release 97: under Transmission across Chemical Synapses, with 137 genes placed in it by the mapping files and 5 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-112314 (human), R-MMU-112314 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 137 genes in this rat pathway; showing 101 to 137, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 2 of 2
GeneGrin2cAuthority24411Mapping file id24411 NCBI fileEvidenceIEA
GeneGrin2dAuthority24412Mapping file id24412 NCBI fileEvidenceIEA
GeneGrin3aAuthority191573Mapping file id191573 NCBI fileEvidenceIEA
GeneGrip1Authority84016Mapping file id84016 NCBI fileEvidenceIEA
GeneGrip2Authority171571Mapping file id171571 NCBI fileEvidenceIEA
GeneHtr3aAuthority79246Mapping file id79246 NCBI fileEvidenceIEA
GeneHtr3bAuthority58963Mapping file id58963 NCBI fileEvidenceIEA
GeneKcnj10Authority29718Mapping file id29718 NCBI fileEvidenceIEA
GeneKcnj12Authority117052Mapping file idENSRNOG00000002303 Ensembl fileEvidenceIEA
GeneKcnj15Authority170847Mapping file id170847 NCBI fileEvidenceIEA
GeneKcnj16Authority29719Mapping file idENSRNOG00000004713 Ensembl fileEvidenceIEA
GeneKcnj2Authority29712Mapping file id29712 NCBI fileEvidenceIEA
GeneKcnj3Authority50599Mapping file id50599 NCBI fileEvidenceIEA
GeneKcnj4Authority116649Mapping file id116649 NCBI fileEvidenceIEA
GeneKcnj5Authority29713Mapping file id29713 NCBI fileEvidenceIEA
GeneKcnj6Authority25743Mapping file id25743 NCBI fileEvidenceIEA
GeneKcnj9Authority116560Mapping file id116560 NCBI fileEvidenceIEA
GeneLrrc7Authority117284Mapping file id117284 NCBI fileEvidenceIEA
GeneMdm2Authority314856Mapping file idENSRNOG00000006304 Ensembl fileEvidenceIEA
GeneMyo6Authority315840Mapping file id315840 NCBI fileEvidenceIEA
GeneNcaldAuthority553106Mapping file id553106 NCBI fileEvidenceIEA
GeneNeflAuthority83613Mapping file id83613 NCBI fileEvidenceIEA
GeneNsfAuthority60355Mapping file id60355 NCBI fileEvidenceIEA
GenePick1Authority84591Mapping file id84591 NCBI fileEvidenceIEA
GenePrkacbAuthority293508Mapping file id293508 NCBI fileEvidenceIEA
GenePrkar1aAuthority25725Mapping file id25725 NCBI fileEvidenceIEA
GenePrkar1bAuthority25521Mapping file id25521 NCBI fileEvidenceIEA
GenePrkar2aAuthority29699Mapping file id29699 NCBI fileEvidenceIEA
GenePrkar2bAuthority24679Mapping file id24679 NCBI fileEvidenceIEA
GenePrkcaAuthority24680Mapping file id24680 NCBI fileEvidenceIEA
GenePrkcbAuthority25023Mapping file id25023 NCBI fileEvidenceIEA
GenePrkcgAuthority24681Mapping file id24681 NCBI fileEvidenceIEA
GeneRps6ka1Authority81771Mapping file id81771 NCBI fileEvidenceIEA
GeneRps6ka2Authority117269Mapping file id117269 NCBI fileEvidenceIEA
GeneRps6ka3Authority501560Mapping file id501560 NCBI fileEvidenceIEA
GeneRps6ka6Authority317203Mapping file idENSRNOG00000002592 Ensembl fileEvidenceIEA
GeneTspan7Authority363447Mapping file id363447 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.