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Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Chemokine receptors bind chemokines

R-RNO-380108 in Reactome release 97: under Peptide ligand-binding receptors, with 45 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-380108 (human), R-MMU-380108 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 45 genes in this rat pathway; showing 1 to 45, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 1
GeneAckr2Authority140473Mapping file idENSRNOG00000019472 Ensembl fileEvidenceIEA
GeneAckr3Authority84348Mapping file id84348 NCBI fileEvidenceIEA
GeneAckr4Authority685243Mapping file id685243 NCBI fileEvidenceIEA
GeneCcl1Authority688605Mapping file id688605 NCBI fileEvidenceIEA
GeneCcl11Authority29397Mapping file id29397 NCBI fileEvidenceIEA
GeneCcl12Authority287562Mapping file id287562 NCBI fileEvidenceIEA
GeneCcl17Authority117518Mapping file id117518 NCBI fileEvidenceIEA
GeneCcl20Authority29538Mapping file id29538 NCBI fileEvidenceIEA
GeneCcl21Authority298006Mapping file id298006 NCBI fileEvidenceIEA
GeneCcl25Authority360750Mapping file idENSRNOG00000028531 Ensembl fileEvidenceIEA
GeneCcl27Authority362505Mapping file id362505 NCBI fileEvidenceIEA
GeneCcl3Authority25542Mapping file id25542 NCBI fileEvidenceIEA
GeneCcl4Authority116637Mapping file id116637 NCBI fileEvidenceIEA
GeneCcl5Authority81780Mapping file idENSRNOG00000047940 Ensembl fileEvidenceIEA
GeneCcl7Authority287561Mapping file id287561 NCBI fileEvidenceIEA
GeneCcr10Authority363682Mapping file id363682 NCBI fileEvidenceIEA
GeneCcr3Authority117027Mapping file id117027 NCBI fileEvidenceIEA
GeneCcr5Authority117029Mapping file id117029 NCBI fileEvidenceIEA
GeneCcr6Authority308163Mapping file id308163 NCBI fileEvidenceIEA
GeneCcr7Authority287673Mapping file id287673 NCBI fileEvidenceIEA
GeneCcr8Authority301066Mapping file id301066 NCBI fileEvidenceIEA
GeneCcr9Authority282832Mapping file id282832 NCBI fileEvidenceIEA
GeneCcrl2Authority316019Mapping file id316019 NCBI fileEvidenceIEA
GeneCx3cl1Authority89808Mapping file id89808 NCBI fileEvidenceIEA
GeneCx3cr1Authority171056Mapping file id171056 NCBI fileEvidenceIEA
GeneCxcl1Authority81503Mapping file id81503 NCBI fileEvidenceIEA
GeneCxcl10Authority245920Mapping file id245920 NCBI fileEvidenceIEA
GeneCxcl11Authority305236Mapping file id305236 NCBI fileEvidenceIEA
GeneCxcl12Authority24772Mapping file id24772 NCBI fileEvidenceIEA
GeneCxcl13Authority498335Mapping file id498335 NCBI fileEvidenceIEA
GeneCxcl16Authority497942Mapping file id497942 NCBI fileEvidenceIEA
GeneCxcl2Authority114105Mapping file id114105 NCBI fileEvidenceIEA
GeneCxcl3Authority171551Mapping file id171551 NCBI fileEvidenceIEA
GeneCxcl6Authority60665Mapping file id60665 NCBI fileEvidenceIEA
GeneCxcl9Authority246759Mapping file id246759 NCBI fileEvidenceIEA
GeneCxcr1Authority54258Mapping file id54258 NCBI fileEvidenceIEA
GeneCxcr2Authority29385Mapping file id29385 NCBI fileEvidenceIEA
GeneCxcr3Authority84475Mapping file id84475 NCBI fileEvidenceIEA
GeneCxcr4Authority60628Mapping file id60628 NCBI fileEvidenceIEA
GeneCxcr5Authority29363Mapping file id29363 NCBI fileEvidenceIEA
GeneCxcr6Authority100124593Mapping file idENSRNOG00000089617 Ensembl fileEvidenceIEA
GenePf4Authority360918Mapping file id360918 NCBI fileEvidenceIEA
GenePpbpAuthority246358Mapping file id246358 NCBI fileEvidenceIEA
GeneXcl1Authority171371Mapping file id171371 NCBI fileEvidenceIEA
GeneXcr1Authority301086Mapping file id301086 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.