Pathway Rat Rattus norvegicus
Read this first
Chemokine receptors bind chemokines
R-RNO-380108 in Reactome release 97: under Peptide ligand-binding receptors, with 45 genes placed in it by the mapping files and 0 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-380108 (human), R-MMU-380108 (mouse). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists.
[R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments.
[R11]
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this rat pathway
The mapping files place 45 genes in this rat pathway; showing 1 to 45, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneAckr2 | Authority140473 | Mapping file idENSRNOG00000019472 Ensembl file | EvidenceIEA |
| GeneAckr3 | Authority84348 | Mapping file id84348 NCBI file | EvidenceIEA |
| GeneAckr4 | Authority685243 | Mapping file id685243 NCBI file | EvidenceIEA |
| GeneCcl1 | Authority688605 | Mapping file id688605 NCBI file | EvidenceIEA |
| GeneCcl11 | Authority29397 | Mapping file id29397 NCBI file | EvidenceIEA |
| GeneCcl12 | Authority287562 | Mapping file id287562 NCBI file | EvidenceIEA |
| GeneCcl17 | Authority117518 | Mapping file id117518 NCBI file | EvidenceIEA |
| GeneCcl20 | Authority29538 | Mapping file id29538 NCBI file | EvidenceIEA |
| GeneCcl21 | Authority298006 | Mapping file id298006 NCBI file | EvidenceIEA |
| GeneCcl25 | Authority360750 | Mapping file idENSRNOG00000028531 Ensembl file | EvidenceIEA |
| GeneCcl27 | Authority362505 | Mapping file id362505 NCBI file | EvidenceIEA |
| GeneCcl3 | Authority25542 | Mapping file id25542 NCBI file | EvidenceIEA |
| GeneCcl4 | Authority116637 | Mapping file id116637 NCBI file | EvidenceIEA |
| GeneCcl5 | Authority81780 | Mapping file idENSRNOG00000047940 Ensembl file | EvidenceIEA |
| GeneCcl7 | Authority287561 | Mapping file id287561 NCBI file | EvidenceIEA |
| GeneCcr10 | Authority363682 | Mapping file id363682 NCBI file | EvidenceIEA |
| GeneCcr3 | Authority117027 | Mapping file id117027 NCBI file | EvidenceIEA |
| GeneCcr5 | Authority117029 | Mapping file id117029 NCBI file | EvidenceIEA |
| GeneCcr6 | Authority308163 | Mapping file id308163 NCBI file | EvidenceIEA |
| GeneCcr7 | Authority287673 | Mapping file id287673 NCBI file | EvidenceIEA |
| GeneCcr8 | Authority301066 | Mapping file id301066 NCBI file | EvidenceIEA |
| GeneCcr9 | Authority282832 | Mapping file id282832 NCBI file | EvidenceIEA |
| GeneCcrl2 | Authority316019 | Mapping file id316019 NCBI file | EvidenceIEA |
| GeneCx3cl1 | Authority89808 | Mapping file id89808 NCBI file | EvidenceIEA |
| GeneCx3cr1 | Authority171056 | Mapping file id171056 NCBI file | EvidenceIEA |
| GeneCxcl1 | Authority81503 | Mapping file id81503 NCBI file | EvidenceIEA |
| GeneCxcl10 | Authority245920 | Mapping file id245920 NCBI file | EvidenceIEA |
| GeneCxcl11 | Authority305236 | Mapping file id305236 NCBI file | EvidenceIEA |
| GeneCxcl12 | Authority24772 | Mapping file id24772 NCBI file | EvidenceIEA |
| GeneCxcl13 | Authority498335 | Mapping file id498335 NCBI file | EvidenceIEA |
| GeneCxcl16 | Authority497942 | Mapping file id497942 NCBI file | EvidenceIEA |
| GeneCxcl2 | Authority114105 | Mapping file id114105 NCBI file | EvidenceIEA |
| GeneCxcl3 | Authority171551 | Mapping file id171551 NCBI file | EvidenceIEA |
| GeneCxcl6 | Authority60665 | Mapping file id60665 NCBI file | EvidenceIEA |
| GeneCxcl9 | Authority246759 | Mapping file id246759 NCBI file | EvidenceIEA |
| GeneCxcr1 | Authority54258 | Mapping file id54258 NCBI file | EvidenceIEA |
| GeneCxcr2 | Authority29385 | Mapping file id29385 NCBI file | EvidenceIEA |
| GeneCxcr3 | Authority84475 | Mapping file id84475 NCBI file | EvidenceIEA |
| GeneCxcr4 | Authority60628 | Mapping file id60628 NCBI file | EvidenceIEA |
| GeneCxcr5 | Authority29363 | Mapping file id29363 NCBI file | EvidenceIEA |
| GeneCxcr6 | Authority100124593 | Mapping file idENSRNOG00000089617 Ensembl file | EvidenceIEA |
| GenePf4 | Authority360918 | Mapping file id360918 NCBI file | EvidenceIEA |
| GenePpbp | Authority246358 | Mapping file id246358 NCBI file | EvidenceIEA |
| GeneXcl1 | Authority171371 | Mapping file id171371 NCBI file | EvidenceIEA |
| GeneXcr1 | Authority301086 | Mapping file id301086 NCBI file | EvidenceIEA |
Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.
- Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Children
None: no pathway of this release's list names this one as a parent.
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.