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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein

R-RNO-446193 in Reactome release 97: under Asparagine N-linked glycosylation, with 73 genes placed in it by the mapping files and 1 child pathway in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-446193 (human), R-MMU-446193 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 73 genes in this rat pathway; showing 1 to 73, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 1
GeneAlg1Authority360475Mapping file id360475 NCBI fileEvidenceIEA
GeneAlg12Authority315212Mapping file id315212 NCBI fileEvidenceIEA
GeneAlg13Authority108349244Mapping file idENSRNOG00000005753 Ensembl fileEvidenceIEA
GeneAlg14Authority362031Mapping file id362031 NCBI fileEvidenceIEA
GeneAlg2Authority313231Mapping file id313231 NCBI fileEvidenceIEA
GeneAlg3Authority287983Mapping file idENSRNOG00000001712 Ensembl fileEvidenceIEA
GeneAlg5Authority295051Mapping file id295051 NCBI fileEvidenceIEA
GeneAlg6Authority362547Mapping file id362547 NCBI fileEvidenceIEA
GeneAlg8Authority293129Mapping file idENSRNOG00000012292 Ensembl fileEvidenceIEA
GeneAlg9Authority367083Mapping file idENSRNOG00000010877 Ensembl fileEvidenceIEA
GeneAmdhd2Authority302972Mapping file id302972 NCBI fileEvidenceIEA
GeneCmasAuthority312826Mapping file idENSRNOG00000013816 Ensembl fileEvidenceIEA
GeneCtsaAuthority296370Mapping file idENSRNOG00000015857 Ensembl fileEvidenceIEA
GeneDhddsAuthority298541Mapping file id298541 NCBI fileEvidenceIEA
GeneDhrsxAuthority288525Mapping file id288525 NCBI fileEvidenceIEA
GeneDolkAuthority311847Mapping file id311847 NCBI fileEvidenceIEA
GeneDolpp1Authority296624Mapping file idENSRNOG00000017663 Ensembl fileEvidenceIEA
GeneDpagt1Authority300668Mapping file id300668 NCBI fileEvidenceIEA
GeneDpm1Authority296394Mapping file id296394 NCBI fileEvidenceIEA
GeneDpm2Authority29640Mapping file id29640 NCBI fileEvidenceIEA
GeneDpm3Authority502017Mapping file id502017 NCBI fileEvidenceIEA
GeneFcskAuthority307848Mapping file idENSRNOG00000059453 Ensembl fileEvidenceIEA
GeneFpgtAuthority310935Mapping file id310935 NCBI fileEvidenceIEA
GeneFuomAuthority293587Mapping file id293587 NCBI fileEvidenceIEA
GeneGfpt1Authority297417Mapping file id297417 NCBI fileEvidenceIEA
GeneGfpt2Authority360518Mapping file id360518 NCBI fileEvidenceIEA
GeneGfusAuthority300036Mapping file idENSRNOG00000009020 Ensembl fileEvidenceIEA
GeneGlb1Authority316033Mapping file id316033 NCBI fileEvidenceIEA
GeneGmdsAuthority291095Mapping file id291095 NCBI fileEvidenceIEA
GeneGmppaAuthority501167Mapping file id501167 NCBI fileEvidenceIEA
GeneGneAuthority114711Mapping file id114711 NCBI fileEvidenceIEA
GeneGnpnat1Authority498486Mapping file id498486 NCBI fileEvidenceIEA
GeneMpdu1Authority303244Mapping file idENSRNOG00000012162 Ensembl fileEvidenceIEA
GeneMpiAuthority300741Mapping file id300741 NCBI fileEvidenceIEA
GeneMvdAuthority81726Mapping file id81726 NCBI fileEvidenceIEA
GeneNagkAuthority297393Mapping file id297393 NCBI fileEvidenceIEA
GeneNanpAuthority311530Mapping file id311530 NCBI fileEvidenceIEA
GeneNansAuthority298071Mapping file id298071 NCBI fileEvidenceIEA
GeneNeu1Authority24591Mapping file idENSRNOG00000032942 Ensembl fileEvidenceIEA
GeneNeu3Authority117185Mapping file id117185 NCBI fileEvidenceIEA
GeneNeu4Authority316642Mapping file id316642 NCBI fileEvidenceIEA
GeneNplAuthority304860Mapping file id304860 NCBI fileEvidenceIEA
GeneNudt14Authority299346Mapping file id299346 NCBI fileEvidenceIEA
GeneNus1Authority294400Mapping file id294400 NCBI fileEvidenceIEA
GenePgm3Authority363109Mapping file id363109 NCBI fileEvidenceIEA
GenePmm1Authority300089Mapping file id300089 NCBI fileEvidenceIEA
GenePmm2Authority302915Mapping file id302915 NCBI fileEvidenceIEA
GeneRenbpAuthority81759Mapping file id81759 NCBI fileEvidenceIEA
GeneSlc17a5Authority363103Mapping file id363103 NCBI fileEvidenceIEA
GeneSlc35a1Authority313139Mapping file id313139 NCBI fileEvidenceIEA
GeneSlc35c1Authority311204Mapping file id311204 NCBI fileEvidenceIEA
GeneSrd5a3Authority305291Mapping file id305291 NCBI fileEvidenceIEA
GeneSt3gal1Authority362924Mapping file id362924 NCBI fileEvidenceIEA
GeneSt3gal2Authority64442Mapping file id64442 NCBI fileEvidenceIEA
GeneSt3gal3Authority64445Mapping file id64445 NCBI fileEvidenceIEA
GeneSt3gal4Authority363040Mapping file id363040 NCBI fileEvidenceIEA
GeneSt3gal5Authority83505Mapping file id83505 NCBI fileEvidenceIEA
GeneSt3gal6Authority304023Mapping file idENSRNOG00000001653 Ensembl fileEvidenceIEA
GeneSt6gal1Authority25197Mapping file id25197 NCBI fileEvidenceIEA
GeneSt6gal2Authority301155Mapping file id301155 NCBI fileEvidenceIEA
GeneSt6galnac1Authority287920Mapping file id287920 NCBI fileEvidenceIEA
GeneSt6galnac2Authority303692Mapping file id303692 NCBI fileEvidenceIEA
GeneSt6galnac3Authority29758Mapping file id29758 NCBI fileEvidenceIEA
GeneSt6galnac5Authority365984Mapping file id365984 NCBI fileEvidenceIEA
GeneSt6galnac6Authority407765Mapping file id407765 NCBI fileEvidenceIEA
GeneSt8sia1Authority25280Mapping file id25280 NCBI fileEvidenceIEA
GeneSt8sia2Authority117523Mapping file id117523 NCBI fileEvidenceIEA
GeneSt8sia3Authority25547Mapping file id25547 NCBI fileEvidenceIEA
GeneSt8sia4Authority116696Mapping file id116696 NCBI fileEvidenceIEA
GeneSt8sia5Authority364901Mapping file id364901 NCBI fileEvidenceIEA
GeneSt8sia6Authority291325Mapping file id291325 NCBI fileEvidenceIEA
GeneUap1Authority498272Mapping file id498272 NCBI fileEvidenceIEA
GeneUap1l2Authority304954Mapping file idENSRNOG00000031342 Ensembl fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.