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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by Non-Receptor Tyrosine Kinases

R-RNO-9006927 in Reactome release 97: under Signal Transduction, with 48 genes placed in it by the mapping files and 1 child pathway in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9006927 (human), R-MMU-9006927 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 48 genes in this rat pathway; showing 1 to 48, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 1
GeneAkt1Authority24185Mapping file id24185 NCBI fileEvidenceIEA
GeneArap1Authority361617Mapping file id361617 NCBI fileEvidenceIEA
GeneArhgap35Authority306400Mapping file id306400 NCBI fileEvidenceIEA
GeneBcar1Authority25414Mapping file id25414 NCBI fileEvidenceIEA
GeneBtcAuthority64022Mapping file id64022 NCBI fileEvidenceIEA
GeneCblAuthority500985Mapping file id500985 NCBI fileEvidenceIEA
GeneCcnd1Authority58919Mapping file id58919 NCBI fileEvidenceIEA
GeneCcne1Authority25729Mapping file idENSRNOG00000014786 Ensembl fileEvidenceIEA
GeneCdk2Authority362817Mapping file idENSRNOG00000006469 Ensembl fileEvidenceIEA
GeneCdk4Authority94201Mapping file id94201 NCBI fileEvidenceIEA
GeneCdkn1bAuthority83571Mapping file id83571 NCBI fileEvidenceIEA
GeneCrkAuthority54245Mapping file id54245 NCBI fileEvidenceIEA
GeneDok1Authority312477Mapping file id312477 NCBI fileEvidenceIEA
GeneEgfAuthority25313Mapping file id25313 NCBI fileEvidenceIEA
GeneEgfrAuthority24329Mapping file id24329 NCBI fileEvidenceIEA
GeneElmo1Authority361251Mapping file idENSRNOG00000059705 Ensembl fileEvidenceIEA
GeneElmo2Authority362271Mapping file id362271 NCBI fileEvidenceIEA
GeneErbb3Authority29496Mapping file id29496 NCBI fileEvidenceIEA
GeneErbb4Authority59323Mapping file id59323 NCBI fileEvidenceIEA
GeneEregAuthority59325Mapping file id59325 NCBI fileEvidenceIEA
GeneGpnmbAuthority113955Mapping file idENSRNOG00000008816 Ensembl fileEvidenceIEA
GeneHbegfAuthority25433Mapping file id25433 NCBI fileEvidenceIEA
GeneHif1aAuthority29560Mapping file id29560 NCBI fileEvidenceIEA
GeneHrasAuthority293621Mapping file id293621 NCBI fileEvidenceIEA
GeneKhdrbs1Authority117268Mapping file id117268 NCBI fileEvidenceIEA
GeneKhdrbs2Authority170843Mapping file id170843 NCBI fileEvidenceIEA
GeneKhdrbs3Authority64015Mapping file id64015 NCBI fileEvidenceIEA
GeneKrasAuthority24525Mapping file id24525 NCBI fileEvidenceIEA
GeneKxd1Authority498606Mapping file idENSRNOG00000019971 Ensembl fileEvidenceIEA
GeneLrrk2Authority300160Mapping file id300160 NCBI fileEvidenceIEA
GeneNrasAuthority24605Mapping file id24605 NCBI fileEvidenceIEA
GeneNrg2Authority432361Mapping file id432361 NCBI fileEvidenceIEA
GeneNrg3Authority498596Mapping file id498596 NCBI fileEvidenceIEA
GenePtk6Authority366275Mapping file id366275 NCBI fileEvidenceIEA
GenePtpn1Authority24697Mapping file id24697 NCBI fileEvidenceIEA
GenePxnAuthority360820Mapping file id360820 NCBI fileEvidenceIEA
GeneRac1Authority363875Mapping file id363875 NCBI fileEvidenceIEA
GeneRasa1Authority25676Mapping file id25676 NCBI fileEvidenceIEA
GeneRhoaAuthority117273Mapping file id117273 NCBI fileEvidenceIEA
GeneRps27aAuthority100912032Mapping file id100912032 NCBI fileEvidenceIEA
GeneSfpqAuthority252855Mapping file idENSRNOG00000058461 Ensembl fileEvidenceIEA
GeneSocs3Authority89829Mapping file id89829 NCBI fileEvidenceIEA
GeneSrmsAuthority296472Mapping file id296472 NCBI fileEvidenceIEA
GeneStap2Authority363334Mapping file idENSRNOG00000047306 Ensembl fileEvidenceIEA
GeneStat3Authority25125Mapping file id25125 NCBI fileEvidenceIEA
GeneUba52Authority64156Mapping file id64156 NCBI fileEvidenceIEA
GeneUbbAuthority192255Mapping file id192255 NCBI fileEvidenceIEA
GeneUbcAuthority50522Mapping file id50522 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.