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Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

RHOH GTPase cycle

R-RNO-9013407 in Reactome release 97: under RHO GTPase cycle, with 37 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9013407 (human), R-MMU-9013407 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 37 genes in this rat pathway; showing 1 to 37, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 1
GeneArhgdiaAuthority360678Mapping file id360678 NCBI fileEvidenceIEA
GeneArhgdibAuthority362456Mapping file id362456 NCBI fileEvidenceIEA
GeneArhgdigAuthority360500Mapping file id360500 NCBI fileEvidenceIEA
GeneCskAuthority315707Mapping file id315707 NCBI fileEvidenceIEA
GeneDbtAuthority29611Mapping file id29611 NCBI fileEvidenceIEA
GeneFam91a1Authority689997Mapping file id689997 NCBI fileEvidenceIEA
GeneJupAuthority81679Mapping file id81679 NCBI fileEvidenceIEA
GeneLamtor1Authority308869Mapping file id308869 NCBI fileEvidenceIEA
GeneLamtor1l1Authority100361543Mapping file idENSRNOG00000004319 Ensembl fileEvidenceIEA
GeneLckAuthority313050Mapping file id313050 NCBI fileEvidenceIEA
GeneMtrAuthority81522Mapping file id81522 NCBI fileEvidenceIEA
GeneNipsnap2Authority498174Mapping file id498174 NCBI fileEvidenceIEA
GeneNsfl1cAuthority83809Mapping file id83809 NCBI fileEvidenceIEA
GeneOsbpl11Authority303888Mapping file id303888 NCBI fileEvidenceIEA
GenePak1Authority29431Mapping file id29431 NCBI fileEvidenceIEA
GenePak2Authority29432Mapping file id29432 NCBI fileEvidenceIEA
GenePak4Authority292756Mapping file id292756 NCBI fileEvidenceIEA
GenePak5Authority311450Mapping file id311450 NCBI fileEvidenceIEA
GenePak6Authority296078Mapping file idENSRNOG00000007925 Ensembl fileEvidenceIEA
GeneRab7aAuthority29448Mapping file id29448 NCBI fileEvidenceIEA
GeneRalgapa1Authority56785Mapping file id56785 NCBI fileEvidenceIEA
GeneRhohAuthority305341Mapping file id305341 NCBI fileEvidenceIEA
GeneRock1Authority81762Mapping file idENSRNOG00000031092 Ensembl fileEvidenceIEA
GeneRock2Authority25537Mapping file id25537 NCBI fileEvidenceIEA
GeneSlc1a5Authority292657Mapping file idENSRNOG00000015948 Ensembl fileEvidenceIEA
GeneSlc4a7Authority117955Mapping file id117955 NCBI fileEvidenceIEA
GeneStomAuthority296655Mapping file idENSRNOG00000019147 Ensembl fileEvidenceIEA
GeneTfrcAuthority64678Mapping file id64678 NCBI fileEvidenceIEA
GeneTmem59Authority100196907Mapping file idENSRNOG00000009778 Ensembl fileEvidenceIEA
GeneTuba1aAuthority64158Mapping file idENSRNOG00000072536 Ensembl fileEvidenceIEA
GeneTuba1bAuthority500929Mapping file id500929 NCBI fileEvidenceIEA
GeneUacaAuthority315732Mapping file id315732 NCBI fileEvidenceIEA
GeneVamp3Authority29528Mapping file id29528 NCBI fileEvidenceIEA
GeneVangl1Authority690366Mapping file idENSRNOG00000016477 Ensembl fileEvidenceIEA
GeneVcpAuthority116643Mapping file id116643 NCBI fileEvidenceIEA
GeneWdr11Authority309016Mapping file idENSRNOG00000020430 Ensembl fileEvidenceIEA
GeneZap70Authority301348Mapping file idENSRNOG00000016995 Ensembl fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.