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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by Rho GTPases, Miro GTPases and RHOBTB3

R-RNO-9716542 in Reactome release 97: under Signal Transduction, with 629 genes placed in it by the mapping files and 3 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9716542 (human), R-MMU-9716542 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 629 genes in this rat pathway; showing 101 to 200, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 2 of 7
GeneBcrAuthority309696Mapping file id309696 NCBI fileEvidenceIEA
GeneBirc5Authority64041Mapping file id64041 NCBI fileEvidenceIEA
GeneBltp3bAuthority363009Mapping file id363009 NCBI fileEvidenceIEA
GeneBrk1Authority679934Mapping file id679934 NCBI fileEvidenceIEA
GeneBtkAuthority367901Mapping file id367901 NCBI fileEvidenceIEA
GeneBub1Authority296137Mapping file id296137 NCBI fileEvidenceIEA
GeneBub1bAuthority171576Mapping file idENSRNOG00000007906 Ensembl fileEvidenceIEA
GeneC1qbpAuthority29681Mapping file id29681 NCBI fileEvidenceIEA
GeneCalm1Authority24242Mapping file idENSRNOG00000072513 Ensembl fileEvidenceIEA
GeneCalm2Authority50663Mapping file idENSRNOG00000067086 Ensembl fileEvidenceIEA
GeneCalm3Authority24244Mapping file id24244 NCBI fileEvidenceIEA
GeneCavin1Authority287710Mapping file idENSRNOG00000019778 Ensembl fileEvidenceIEA
GeneCcdc187Authority499759Mapping file idENSRNOG00000027392 Ensembl fileEvidenceIEA
GeneCcdc88aAuthority305605Mapping file id305605 NCBI fileEvidenceIEA
GeneCcne1Authority25729Mapping file idENSRNOG00000014786 Ensembl fileEvidenceIEA
GeneCcp110Authority361634Mapping file idENSRNOG00000027405 Ensembl fileEvidenceIEA
GeneCct2Authority299809Mapping file id299809 NCBI fileEvidenceIEA
GeneCct6aAuthority288620Mapping file idENSRNOG00000000923 Ensembl fileEvidenceIEA
GeneCct7Authority297406Mapping file id297406 NCBI fileEvidenceIEA
GeneCdc20Authority64515Mapping file id64515 NCBI fileEvidenceIEA
GeneCdc25cAuthority307511Mapping file id307511 NCBI fileEvidenceIEA
GeneCdc37Authority114562Mapping file id114562 NCBI fileEvidenceIEA
GeneCdc42Authority64465Mapping file id64465 NCBI fileEvidenceIEA
GeneCdc42bpaAuthority114116Mapping file id114116 NCBI fileEvidenceIEA
GeneCdc42bpbAuthority113960Mapping file id113960 NCBI fileEvidenceIEA
GeneCdc42ep1Authority315121Mapping file id315121 NCBI fileEvidenceIEA
GeneCdc42ep2Authority309175Mapping file id309175 NCBI fileEvidenceIEA
GeneCdc42ep3Authority313838Mapping file id313838 NCBI fileEvidenceIEA
GeneCdc42ep4Authority303653Mapping file id303653 NCBI fileEvidenceIEA
GeneCdca8Authority500545Mapping file id500545 NCBI fileEvidenceIEA
GeneCdh1Authority83502Mapping file id83502 NCBI fileEvidenceIEA
GeneCenpaAuthority298850Mapping file id298850 NCBI fileEvidenceIEA
GeneCenpcAuthority305270Mapping file id305270 NCBI fileEvidenceIEA
GeneCenpeAuthority362044Mapping file idENSRNOG00000009339 Ensembl fileEvidenceIEA
GeneCenpfAuthority257649Mapping file id257649 NCBI fileEvidenceIEA
GeneCenphAuthority681185Mapping file id681185 NCBI fileEvidenceIEA
GeneCenpiAuthority25448Mapping file id25448 NCBI fileEvidenceIEA
GeneCenpkAuthority294712Mapping file idENSRNOG00000039740 Ensembl fileEvidenceIEA
GeneCenplAuthority289150Mapping file id289150 NCBI fileEvidenceIEA
GeneCenpmAuthority315164Mapping file id315164 NCBI fileEvidenceIEA
GeneCenpnAuthority361416Mapping file id361416 NCBI fileEvidenceIEA
GeneCenpoAuthority684439Mapping file id684439 NCBI fileEvidenceIEA
GeneCenppAuthority679342Mapping file id679342 NCBI fileEvidenceIEA
GeneCenpqAuthority363198Mapping file id363198 NCBI fileEvidenceIEA
GeneCenptAuthority307805Mapping file id307805 NCBI fileEvidenceIEA
GeneCenpuAuthority306464Mapping file id306464 NCBI fileEvidenceIEA
GeneCep97Authority304007Mapping file id304007 NCBI fileEvidenceIEA
GeneCftrAuthority24255Mapping file id24255 NCBI fileEvidenceIEA
GeneChn2Authority84031Mapping file id84031 NCBI fileEvidenceIEA
GeneCitAuthority83620Mapping file id83620 NCBI fileEvidenceIEA
GeneCkap4Authority362859Mapping file id362859 NCBI fileEvidenceIEA
GeneCkap5Authority311191Mapping file id311191 NCBI fileEvidenceIEA
GeneCkbAuthority24264Mapping file id24264 NCBI fileEvidenceIEA
GeneClasp1Authority304740Mapping file idENSRNOG00000002376 Ensembl fileEvidenceIEA
GeneClasp2Authority114514Mapping file id114514 NCBI fileEvidenceIEA
GeneClip1Authority65201Mapping file id65201 NCBI fileEvidenceIEA
GeneCltcAuthority54241Mapping file id54241 NCBI fileEvidenceIEA
GeneCops2Authority261736Mapping file id261736 NCBI fileEvidenceIEA
GeneCops4Authority360915Mapping file id360915 NCBI fileEvidenceIEA
GeneCpdAuthority25306Mapping file id25306 NCBI fileEvidenceIEA
GeneCpne8Authority362988Mapping file id362988 NCBI fileEvidenceIEA
GeneCpsf7Authority365407Mapping file id365407 NCBI fileEvidenceIEA
GeneCskAuthority315707Mapping file id315707 NCBI fileEvidenceIEA
GeneCtnna1Authority307505Mapping file idENSRNOG00000005796 Ensembl fileEvidenceIEA
GeneCtnnb1Authority84353Mapping file id84353 NCBI fileEvidenceIEA
GeneCul3Authority301555Mapping file id301555 NCBI fileEvidenceIEA
GeneCybaAuthority79129Mapping file id79129 NCBI fileEvidenceIEA
GeneCybbAuthority66021Mapping file id66021 NCBI fileEvidenceIEA
GeneCyfip1Authority308666Mapping file id308666 NCBI fileEvidenceIEA
GeneCyfip2Authority303073Mapping file idENSRNOG00000006557 Ensembl fileEvidenceIEA
GeneDaam1Authority314212Mapping file id314212 NCBI fileEvidenceIEA
GeneDbtAuthority29611Mapping file id29611 NCBI fileEvidenceIEA
GeneDdrgk1Authority296162Mapping file id296162 NCBI fileEvidenceIEA
GeneDdx39bAuthority114612Mapping file id114612 NCBI fileEvidenceIEA
GeneDdx4Authority310090Mapping file id310090 NCBI fileEvidenceIEA
GeneDef6Authority309642Mapping file idENSRNOG00000000502 Ensembl fileEvidenceIEA
GeneDepdc1bAuthority310074Mapping file id310074 NCBI fileEvidenceIEA
GeneDiaph1Authority307483Mapping file idENSRNOG00000019688 Ensembl fileEvidenceIEA
GeneDiaph3Authority290396Mapping file id290396 NCBI fileEvidenceIEA
GeneDlc1Authority58834Mapping file idENSRNOG00000010780 Ensembl fileEvidenceIEA
GeneDlg4Authority29495Mapping file id29495 NCBI fileEvidenceIEA
GeneDlg5Authority305645Mapping file id305645 NCBI fileEvidenceIEA
GeneDnmbpAuthority309362Mapping file id309362 NCBI fileEvidenceIEA
GeneDock10Authority301556Mapping file idENSRNOG00000053200 Ensembl fileEvidenceIEA
GeneDock11Authority313438Mapping file id313438 NCBI fileEvidenceIEA
GeneDock2Authority360509Mapping file id360509 NCBI fileEvidenceIEA
GeneDock3Authority315992Mapping file id315992 NCBI fileEvidenceIEA
GeneDock4Authority366608Mapping file id366608 NCBI fileEvidenceIEA
GeneDock5Authority305987Mapping file id305987 NCBI fileEvidenceIEA
GeneDock6Authority367039Mapping file idENSRNOG00000010652 Ensembl fileEvidenceIEA
GeneDock7Authority313388Mapping file id313388 NCBI fileEvidenceIEA
GeneDock8Authority499337Mapping file idENSRNOG00000015894 Ensembl fileEvidenceIEA
GeneDsg1Authority291755Mapping file id291755 NCBI fileEvidenceIEA
GeneDsg2Authority307562Mapping file id307562 NCBI fileEvidenceIEA
GeneDsn1Authority499933Mapping file idENSRNOG00000006236 Ensembl fileEvidenceIEA
GeneDspAuthority306871Mapping file id306871 NCBI fileEvidenceIEA
GeneDstAuthority316313Mapping file idENSRNOG00000012207 Ensembl fileEvidenceIEA
GeneDvl1Authority83721Mapping file id83721 NCBI fileEvidenceIEA
GeneDvl2Authority303251Mapping file id303251 NCBI fileEvidenceIEA
GeneDvl3Authority303811Mapping file id303811 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.