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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Ribosome Quality Control (RQC) complex extracts and degrades nascent peptide

R-RNO-9954709 in Reactome release 97: under Ribosome-associated quality control, with 115 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9954709 (human), R-MMU-9954709 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 115 genes in this rat pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 2
GeneAdrm1Authority65138Mapping file id65138 NCBI fileEvidenceIEA
GeneCommd5Authority245974Mapping file idENSRNOG00000004484 Ensembl fileEvidenceIEA
GeneCul2Authority361258Mapping file idENSRNOG00000015292 Ensembl fileEvidenceIEA
GeneDnah11Authority117253Mapping file idENSRNOG00000005451 Ensembl fileEvidenceIEA
GeneElobAuthority81807Mapping file id81807 NCBI fileEvidenceIEA
GeneElocAuthority64525Mapping file id64525 NCBI fileEvidenceIEA
GeneEloc-ps4Authority103694416Mapping file idENSRNOG00000051063 Ensembl fileEvidenceIEA
GeneFlt3lgAuthority103691134Mapping file idENSRNOG00000020618 Ensembl fileEvidenceIEA
GeneKlhdc10Authority312199Mapping file id312199 NCBI fileEvidenceIEA
GeneKxd1Authority498606Mapping file idENSRNOG00000019971 Ensembl fileEvidenceIEA
GeneLOC100910714Authority100910714Mapping file id100910714 NCBI fileEvidenceIEA
GeneLOC120095889Authority120095889Mapping file idENSRNOG00000050264 Ensembl fileEvidenceIEA
GeneLOC134480579Authority134480579Mapping file id134480579 NCBI fileEvidenceIEA
GeneLOC134486107Authority134486107Mapping file id134486107 NCBI fileEvidenceIEA
GeneLOC148000852Authority148000852Mapping file idENSRNOG00000033030 Ensembl fileEvidenceIEA
GeneLtn1Authority288308Mapping file idENSRNOG00000001602 Ensembl fileEvidenceIEA
GeneNemfAuthority100322884Mapping file idENSRNOG00000056128 Ensembl fileEvidenceIEA
GenePsma1Authority29668Mapping file id29668 NCBI fileEvidenceIEA
GenePsma2Authority29669Mapping file id29669 NCBI fileEvidenceIEA
GenePsma3Authority29670Mapping file id29670 NCBI fileEvidenceIEA
GenePsma4Authority29671Mapping file id29671 NCBI fileEvidenceIEA
GenePsma5Authority29672Mapping file idENSRNOG00000019868 Ensembl fileEvidenceIEA
GenePsma6Authority29673Mapping file id29673 NCBI fileEvidenceIEA
GenePsma7Authority29674Mapping file idENSRNOG00000056853 Ensembl fileEvidenceIEA
GenePsmb1Authority94198Mapping file id94198 NCBI fileEvidenceIEA
GenePsmb2Authority29675Mapping file id29675 NCBI fileEvidenceIEA
GenePsmb3Authority29676Mapping file id29676 NCBI fileEvidenceIEA
GenePsmb5Authority29425Mapping file id29425 NCBI fileEvidenceIEA
GenePsmb6Authority29666Mapping file id29666 NCBI fileEvidenceIEA
GenePsmb6l1Authority100360846Mapping file id100360846 NCBI fileEvidenceIEA
GenePsmb7Authority85492Mapping file id85492 NCBI fileEvidenceIEA
GenePsmc1Authority117263Mapping file id117263 NCBI fileEvidenceIEA
GenePsmc2Authority25581Mapping file id25581 NCBI fileEvidenceIEA
GenePsmc3Authority29677Mapping file id29677 NCBI fileEvidenceIEA
GenePsmc4Authority117262Mapping file id117262 NCBI fileEvidenceIEA
GenePsmc5Authority81827Mapping file id81827 NCBI fileEvidenceIEA
GenePsmd1Authority83806Mapping file id83806 NCBI fileEvidenceIEA
GenePsmd11Authority303353Mapping file id303353 NCBI fileEvidenceIEA
GenePsmd12Authority287772Mapping file id287772 NCBI fileEvidenceIEA
GenePsmd13Authority365388Mapping file id365388 NCBI fileEvidenceIEA
GenePsmd14Authority311078Mapping file id311078 NCBI fileEvidenceIEA
GenePsmd2Authority287984Mapping file id287984 NCBI fileEvidenceIEA
GenePsmd3Authority287670Mapping file idENSRNOG00000028103 Ensembl fileEvidenceIEA
GenePsmd6Authority289924Mapping file idENSRNOG00000006751 Ensembl fileEvidenceIEA
GenePsmd7Authority307821Mapping file idENSRNOG00000014097 Ensembl fileEvidenceIEA
GenePsmd8Authority292766Mapping file id292766 NCBI fileEvidenceIEA
GeneRchy1Authority289508Mapping file id289508 NCBI fileEvidenceIEA
GeneRpl10Authority81764Mapping file id81764 NCBI fileEvidenceIEA
GeneRpl10aAuthority81729Mapping file id81729 NCBI fileEvidenceIEA
GeneRpl10lAuthority299106Mapping file idENSRNOG00000086327 Ensembl fileEvidenceIEA
GeneRpl11Authority362631Mapping file id362631 NCBI fileEvidenceIEA
GeneRpl12Authority499782Mapping file id499782 NCBI fileEvidenceIEA
GeneRpl13Authority81765Mapping file id81765 NCBI fileEvidenceIEA
GeneRpl13aAuthority317646Mapping file idENSRNOG00000084489 Ensembl fileEvidenceIEA
GeneRpl14Authority65043Mapping file idENSRNOG00000019007 Ensembl fileEvidenceIEA
GeneRpl15Authority245981Mapping file id245981 NCBI fileEvidenceIEA
GeneRpl17Authority291434Mapping file id291434 NCBI fileEvidenceIEA
GeneRpl17-ps17Authority362181Mapping file idENSRNOG00000029262 Ensembl fileEvidenceIEA
GeneRpl18Authority81766Mapping file id81766 NCBI fileEvidenceIEA
GeneRpl18aAuthority290641Mapping file id290641 NCBI fileEvidenceIEA
GeneRpl19Authority81767Mapping file id81767 NCBI fileEvidenceIEA
GeneRpl22Authority81768Mapping file id81768 NCBI fileEvidenceIEA
GeneRpl22l1Authority361923Mapping file id361923 NCBI fileEvidenceIEA
GeneRpl23Authority29282Mapping file id29282 NCBI fileEvidenceIEA
GeneRpl23aAuthority360572Mapping file id360572 NCBI fileEvidenceIEA
GeneRpl24Authority64307Mapping file id64307 NCBI fileEvidenceIEA
GeneRpl26Authority287417Mapping file idENSRNOG00000004214 Ensembl fileEvidenceIEA
GeneRpl27Authority64306Mapping file id64306 NCBI fileEvidenceIEA
GeneRpl27aAuthority293418Mapping file id293418 NCBI fileEvidenceIEA
GeneRpl28Authority64638Mapping file idENSRNOG00000017127 Ensembl fileEvidenceIEA
GeneRpl29Authority29283Mapping file id29283 NCBI fileEvidenceIEA
GeneRpl3Authority300079Mapping file id300079 NCBI fileEvidenceIEA
GeneRpl30Authority64640Mapping file id64640 NCBI fileEvidenceIEA
GeneRpl30l2Authority100362027Mapping file idENSRNOG00000032825 Ensembl fileEvidenceIEA
GeneRpl31Authority64298Mapping file id64298 NCBI fileEvidenceIEA
GeneRpl31l1Authority688416Mapping file idENSRNOG00000029926 Ensembl fileEvidenceIEA
GeneRpl31l15Authority100361974Mapping file id100361974 NCBI fileEvidenceIEA
GeneRpl32Authority28298Mapping file id28298 NCBI fileEvidenceIEA
GeneRpl35Authority296709Mapping file id296709 NCBI fileEvidenceIEA
GeneRpl36Authority58927Mapping file id58927 NCBI fileEvidenceIEA
GeneRpl36aAuthority292964Mapping file id292964 NCBI fileEvidenceIEA
GeneRpl36al-ps5Authority365560Mapping file idENSRNOG00000032408 Ensembl fileEvidenceIEA
GeneRpl36al1Authority81769Mapping file idENSRNOG00000031315 Ensembl fileEvidenceIEA
GeneRpl36l3Authority100361060Mapping file id100361060 NCBI fileEvidenceIEA
GeneRpl36l5Authority100360439Mapping file id100360439 NCBI fileEvidenceIEA
GeneRpl37Authority120093056Mapping file id120093056 NCBI fileEvidenceIEA
GeneRpl37-ps5Authority100360841Mapping file idENSRNOG00000033803 Ensembl fileEvidenceIEA
GeneRpl37l1Authority81770Mapping file id81770 NCBI fileEvidenceIEA
GeneRpl38Authority689284Mapping file id689284 NCBI fileEvidenceIEA
GeneRpl38-ps1Authority690833Mapping file idENSRNOG00000079786 Ensembl fileEvidenceIEA
GeneRpl38-ps2Authority689671Mapping file idENSRNOG00000033686 Ensembl fileEvidenceIEA
GeneRpl38-ps3Authority681221Mapping file idENSRNOG00000049047 Ensembl fileEvidenceIEA
GeneRpl38-ps8Authority690468Mapping file idENSRNOG00000030747 Ensembl fileEvidenceIEA
GeneRpl38-ps9Authority685963Mapping file idENSRNOG00000048701 Ensembl fileEvidenceIEA
GeneRpl39Authority25347Mapping file id25347 NCBI fileEvidenceIEA
GeneRpl39l1Authority497860Mapping file id497860 NCBI fileEvidenceIEA
GeneRpl3lAuthority287122Mapping file id287122 NCBI fileEvidenceIEA
GeneRpl4Authority64302Mapping file id64302 NCBI fileEvidenceIEA
GeneRpl5Authority81763Mapping file id81763 NCBI fileEvidenceIEA
GeneRpl6Authority117042Mapping file id117042 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.