Disease or phenotype MONDO
skeletal dysplasia
MONDO_0018230 in Open Targets Platform 26.06, filed under genetic, familial or congenital disease, musculoskeletal or connective tissue disease, phenotype. The targets below are ranked by the Platform's association score, which the Platform says is not a confidence score; the ClinGen card is a separate question, whether variation in a gene causes a monogenic disease.
Which targets
Indirect is the Platform's own default when listing a disease's targets: the evidence of the term's ontology descendants counts. Direct counts the evidence between the two terms alone. The page says which it shows.
01The term
About this term, from the Platform
What this tells you
The name, the therapeutic areas, the parents and the children in the strip are read from the disease dataset of Open Targets Platform 26.06, built into this site on 2026-09-09; the description, the synonyms and the ranked targets are read live from the Platform's API, which names the same release on every answer, and every figure on this page is the Platform's own.
What the entity is, in the Platform's words: A disease or phenotype in the Platform is understood as any disease, phenotype, biological process or measurement that might have any type of causality relationship with a human target. The EMBL-EBI Experimental Factor Ontology (EFO) is used as scaffold for the disease or phenotype entity.
[R16] So a measurement or a biological process has a page here like a disease, and the therapeutic areas in the strip say which kind of term it is. What a target is: A target in the Platform is understood as any naturally-occurring molecule that can be targeted by a medicinal product. EMBL-EBI's Ensembl database is used as source for human targets in the Platform, with the Ensembl gene ID as the primary identifier.
[R18]
The ranking is by the Platform's overall association score: The overall association score aims to summarise all the aggregated evidence for a given target-disease association. The score is derived by calculating the harmonic sum of the association score by data source weighted by the data source weights, regardless of their data type categorisation.
[R15] And what the score is not: While scores are useful to rank lists of targets or diseases, they should not be interpreted as a confidence score for the target-disease association.
[R15] For example, under-studied diseases are unlikely to produce high-scoring targets due to the lack of available evidence. In such diseases, a relatively low-scoring target might still be the top-ranked target and potentially a very interesting lead from a therapeutic standpoint.
[R15]
Two views, in the Platform's words. Direct: The Platform refers to associations described by aggregated evidence between two specific terms in our data sources as direct associations.
[R15] Indirect, the Platform's own default when listing the targets of a disease: An association page for targets associated with a disease (e.g. Inflammatory Bowel Disease associations page) includes both direct and indirect evidence.
[R15] One data type is never propagated: RNA expression data type evidence is not propagated in the ontology. We made this decision to prevent parent terms from having long lists of associated targets with weak RNA expression association scores.
[R15]
The data are public domain, Open Targets Platform is marked with CC0 1.0. This dedicates the data to the public domain, allowing downstream users to consume the data without restriction.
[R14] and the Platform asks that its latest publication be cited [R17], which is [R03].
A target high on this list is a gene the Platform's sources associate with this term by the Platform's arithmetic over their evidence; choosing a knockdown target from it means reading the evidence behind the row on the Platform's own page, which each row links to, and the order of two rows that share a score can differ between requests, which the page says when it happens.
- [R03] Buniello A, Suveges D, Cruz-Castillo C, Llinares MB, Cornu H, Lopez I, et al. (2025). Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery. Nucleic Acids Research 53:D1467-D1475. PMID 39657122, doi 10.1093/nar/gkae1128.
- [R14] Open Targets Platform Documentation. Licence. https://platform-docs.opentargets.org/licence, read 2026-09-09.
- [R15] Open Targets Platform Documentation. Target-disease associations. https://platform-docs.opentargets.org/associations, read 2026-09-09.
- [R16] Open Targets Platform Documentation. Disease or Phenotype. https://platform-docs.opentargets.org/disease-or-phenotype, read 2026-09-09.
- [R17] Open Targets Platform Documentation. Citation. https://platform-docs.opentargets.org/citation, read 2026-09-09.
- [R18] Open Targets Platform Documentation. Target. https://platform-docs.opentargets.org/target, read 2026-09-09.
02Ranked targets
Targets the Platform ranks for this term, indirect view
03ClinGen
Gene-disease validity curations for this MONDO term
What this tells you
The curations are read from ClinGen's gene-disease validity download, keyed on the MONDO term Open Targets writes for this entity after an exact character translation and never after a search; a term of another ontology has no counterpart in that file, and the card says so. Each row shows which of ClinGen's classifications it carries, with the procedure version and the date it was made under; nothing here ranks the classifications.
What a classification is about, in ClinGen's words: The ClinGen Gene-Disease Clinical Validity curation process involves evaluating the strength of evidence supporting or refuting a claim that variation in a particular gene causes a particular monogenic disease.
[R20] And what the process is not: This curation process is not intended to be a systematic review of all available literature for a given gene or condition, but instead an overview of the most pertinent evidence required to assign the appropriate classification for a gene-disease relationship at a given time.
[R21]
The classification vocabulary is the 8 values ClinGen's own results table lists in its Classification filter control, in the control's own alphabetical order [R23]: Animal Model Only, Definitive, Disputed, Limited, Moderate, No Known Disease Relationship, Refuted, Strong. The order is the control's and carries no strength: nothing here ranks the values, and a value outside that set is shown as the file writes it and marked as unlisted, never mapped to a neighbour. The definitions of the values are in the standard operating procedure, which ClinGen publishes as a document [R22]; this site has not read that document, so no definition is stated here, and the framework paper the procedure rests on is [R06]. Each row carries the procedure version it was made under, as the table does, because rows made under different versions sit side by side.
ClinGen's curated content is public domain: All curated content published by ClinGen is available free of restriction under the CC0 1.0 Universal (CC0 1.0) Public Domain Dedication. However, ClinGen requests that you give attribution to ClinGen and provide the date accessed whenever possible and appropriate.
[R19] The attribution in the card's provenance line follows ClinGen's own example statement, and no logo is shown: The ClinGen logo cannot be used without prior approval of the ClinGen Steering Committee.
[R19] ClinGen asks that its marker paper [R04] and its 2024 consortium paper [R05] be cited.
A ClinGen classification is a statement about whether variation in a gene causes a monogenic disease. It is not a statement about whether the gene is a knockdown target, and it is not a rank beside the Platform's score above it.
- [R04] Rehm HL, Berg JS, Brooks LD, Bustamante CD, Evans JP, Landrum MJ, et al. (2015). ClinGen--the Clinical Genome Resource. N Engl J Med 372:2235-2242. PMID 26014595, doi 10.1056/NEJMsr1406261.
- [R05] ClinGen Consortium (2025). The Clinical Genome Resource (ClinGen): Advancing genomic knowledge through global curation. Genet Med 27:101228. PMID 39404758, doi 10.1016/j.gim.2024.101228.
- [R06] Strande NT, Riggs ER, Buchanan AH, Ceyhan-Birsoy O, DiStefano M, Dwight SS, et al. (2017). Evaluating the Clinical Validity of Gene-Disease Associations: An Evidence-Based Framework Developed by the Clinical Genome Resource. Am J Hum Genet 100:895-906. PMID 28552198, doi 10.1016/j.ajhg.2017.04.015.
- [R19] ClinGen, Clinical Genome Resource. Citing ClinGen & Terms of Use. https://clinicalgenome.org/docs/terms-of-use/, read 2026-09-09.
- [R20] ClinGen, Clinical Genome Resource. Gene-Disease Validity. https://clinicalgenome.org/curation-activities/gene-disease-validity/, read 2026-09-09.
- [R21] ClinGen, Clinical Genome Resource. Gene-Disease Validity Standard Operating Procedure. https://clinicalgenome.org/docs/gene-disease-validity-standard-operating-procedure/, read 2026-09-09.
- [R22] ClinGen, Clinical Genome Resource. Gene-Disease Validity Standard Operating Procedures, Version 12. https://clinicalgenome.org/docs/gene-disease-validity-standard-operating-procedures-version-12/, read 2026-09-09.
- [R23] ClinGen, Clinical Genome Resource. ClinGen Gene-Disease Validity Curations. https://search.clinicalgenome.org/kb/gene-validity, read 2026-09-09.
04The ontology
Where the release places this term
Parents
Children
- Epiphyseal dysplasiaHP_0002656
- Lethal skeletal dysplasiaHP_0005716
- Multiple skeletal anomaliesHP_0005775
- Metaphyseal dysplasiaHP_0100255
- osteochondrodysplasiaMONDO_0005516
- diaphyseal medullary stenosis-bone malignancy syndromeMONDO_0007205
- fibular aplasia-ectrodactyly syndromeMONDO_0007225
- cerebrocostomandibular syndromeMONDO_0007301
- cleidorhizomelic syndromeMONDO_0007341
- dyschondrosteosis-nephritis syndromeMONDO_0007482
- dysplasia epiphysealis hemimelicaMONDO_0007489
- carpotarsal osteochondromatosisMONDO_0007490
- Camurati-Engelmann diseaseMONDO_0007542
- genochondromatosisMONDO_0007653
- autosomal dominant osteosclerosis, Worth typeMONDO_0007764
- coxopodopatellar syndromeMONDO_0007841
- Lenz-Majewski hyperostotic dwarfismMONDO_0007892
- delayed membranous cranial ossificationMONDO_0007971
- metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndromeMONDO_0007984
- oculodentodigital dysplasiaMONDO_0008111
- Ollier diseaseMONDO_0008145
- osteoglophonic dysplasiaMONDO_0008150
- parietal foramina with cleidocranial dysplasiaMONDO_0008198
- chondromalacia patellaeMONDO_0008207
- Currarino triadMONDO_0008305
- Proteus syndromeMONDO_0008318
- brachydactyly-elbow wrist dysplasia syndromeMONDO_0008520
- tricho-dento-osseous syndromeMONDO_0008592
- bird headed-dwarfism, Montreal typeMONDO_0008870
- Yunis-Varon syndromeMONDO_0008995
- split hand-foot malformation 1 with sensorineural hearing lossMONDO_0009080
- ghosal hematodiaphyseal dysplasiaMONDO_0009274
- hyperostosis corticalis generalisataMONDO_0009395
- Larsen-like syndrome, B3GAT3 typeMONDO_0009511
- mesomelic dwarfism-cleft palate-camptodactyly syndromeMONDO_0009589
- metaphyseal acroscyphodysplasiaMONDO_0009592
- metaphyseal dysostosis-intellectual disability-conductive deafness syndromeMONDO_0009599
- familial osteodysplasia, Anderson typeMONDO_0009801
- pseudodiastrophic dysplasiaMONDO_0009914
- rhizomelic syndrome, Urbach typeMONDO_0009996
- Richieri Costa-Pereira syndromeMONDO_0009998
- craniometadiaphyseal dysplasia, wormian bone typeMONDO_0010014
- Weaver syndromeMONDO_0010193
- SHOX-related short statureMONDO_0010367
- craniofrontonasal syndromeMONDO_0010570
- Eiken syndromeMONDO_0010803
- 2q37 microdeletion syndromeMONDO_0010886
- skeletal dysplasia-epilepsy-short stature syndromeMONDO_0011011
- rhizomelic dysplasia, Patterson-Lowry typeMONDO_0011079
- pelvic dysplasia-arthrogryposis of lower limbs syndromeMONDO_0011235
- Marshall-Smith syndromeMONDO_0011244
- metaphyseal dysplasia, Braun-Tinschert typeMONDO_0011620
- genitopatellar syndromeMONDO_0011640
- osteofibrous dysplasiaMONDO_0011806
- Larsen-like osseous dysplasia-short stature syndromeMONDO_0012055
- pancreatic insufficiency-anemia-hyperostosis syndromeMONDO_0012992
- microcephalic primordial dwarfism due to ZNF335 deficiencyMONDO_0014043
- Hartsfield-Bixler-Demyer syndromeMONDO_0014196
- colobomatous microphthalmia-rhizomelic dysplasia syndromeMONDO_0014380
- Tatton-Brown-Rahman overgrowth syndromeMONDO_0014382
- tall stature-scoliosis-macrodactyly of the great toes syndromeMONDO_0014401
- Catel-Manzke syndromeMONDO_0014507
- skeletal overgrowth-craniofacial dysmorphism-hyperelastic skin-white matter lesions syndromeMONDO_0014704
- complex lethal osteochondrodysplasiaMONDO_0014821
- amniotic band syndromeMONDO_0015167
- metaphyseal anadysplasiaMONDO_0015177
- syndromic craniosynostosisMONDO_0015338
- thin ribs-tubular bones-dysmorphism syndromeMONDO_0015462
- dysplasia of head of femur, Meyer typeMONDO_0015678
- melorheostosis with osteopoikilosisMONDO_0015995
- Cole-Carpenter syndromeMONDO_0016085
- spondyloepiphyseal dysplasiaMONDO_0016761
- spondylometaphyseal dysplasiaMONDO_0016763
- omodysplasiaMONDO_0017136
- Bruck syndromeMONDO_0017195
- osteopetrosisMONDO_0017198
- congenital absence of upper arm and forearm with hand presentMONDO_0017441
- congenital absence of thigh and lower leg with foot presentMONDO_0017442
- congenital absence of both forearm and handMONDO_0017443
- congenital absence of both lower leg and footMONDO_0017444
- acheiriaMONDO_0017445
- apodiaMONDO_0017446
- chondroectodermal dysplasia with night blindnessMONDO_0017869
- TRPV4-related bone disorderMONDO_0018240
- adactyly of footMONDO_0018563
- short stature-advanced bone age-early-onset osteoarthritis syndromeMONDO_0018566
- McCune-Albright syndromeMONDO_0018919
- parietal foraminaMONDO_0018953
- Sotos syndromeMONDO_0019349
- dysspondyloenchondromatosisMONDO_0019412
- autosomal recessive cutis laxa type 2MONDO_0019573
- FGFR3-related chondrodysplasiaMONDO_0019685
- filamin-related bone disorderMONDO_0019690
- short rib dysplasiaMONDO_0019691
- spondylodysplastic dysplasiaMONDO_0019694
- acromelic dysplasiaMONDO_0019695
- bent bone dysplasiaMONDO_0019698
- chondrodysplasia punctataMONDO_0019701
- primary osteolysisMONDO_0019707
- non-syndromic limb reduction defectMONDO_0019713
- Robinow syndromeMONDO_0019978
- synpolydactylyMONDO_0021651
- type 2 collagenopathyMONDO_0022800
- LRP5-related primary osteoporosisMONDO_0044675
- spondyloepimetaphyseal dysplasiaMONDO_0100510
- SLC26A2-related skeletal dysplasiaMONDO_0100592
- COMP-related skeletal dysplasiaMONDO_0100593
- primordial dwarfism and slender bone disorderMONDO_0800063
- polydactyly-syndactyly-triphalangismMONDO_0800066
- lysosomal storage disease with skeletal involvementMONDO_0800088
- abnormal mineralization disorderMONDO_0800096
- calvarial doughnut lesions with bone fragility and spondylometaphyseal dysplasiaMONDO_0800204
- rhizomelic dysplasia, Ain-Naz typeMONDO_0859203
- craniotubular dysplasia, Ikegawa typeMONDO_0859226
- TRIP11-related skeletal dysplasiaMONDO_1040009
- FAM111A-related skeletal dysplasiaMONDO_1060172
- sulfation-related bone disorderEFO_0700110
- multiple metaphyseal dysplasiaEFO_0700111
- primary bone dysplasia with increased bone densityEFO_0700137
- primary bone dysplasia with multiple joint dislocationsEFO_0700138
Therapeutic areas
The same term as ClinGen's file writes it: MONDO:0018230 (the Monarch Initiative's page), by an exact character translation of the Platform's id.
- Open Targets Platform, the disease dataset · Open Targets Platform 26.06 · read · Open Targets PlatformOpen Targets Platform is marked with CC0 1.0. Citation requested: Buniello A et al., Nucleic Acids Research (2025), doi 10.1093/nar/gkae1128.