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Pathway Human Homo sapiens

Cytosolic sensors of pathogen-associated DNA

R-HSA-1834949 in Reactome release 97: under Innate Immune System, with 64 genes placed in it by the mapping files and 5 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-1834949 (mouse), R-RNO-1834949 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 64 genes in this human pathway; showing 1 to 64, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 1
GeneAIM2AuthorityHGNC:357Mapping file id9447 NCBI fileEvidenceTAS
GeneCGASAuthorityHGNC:21367Mapping file id115004 NCBI fileEvidenceTAS
GeneCHUKAuthorityHGNC:1974Mapping file id1147 NCBI fileEvidenceTAS
GeneCRCPAuthorityHGNC:17888Mapping file id27297 NCBI fileEvidenceTAS
GeneCREBBPAuthorityHGNC:2348Mapping file id1387 NCBI fileEvidenceTAS
GeneCTNNB1AuthorityHGNC:2514Mapping file id1499 NCBI fileEvidenceTAS
GeneDDX41AuthorityHGNC:18674Mapping file id51428 NCBI fileEvidenceTAS
GeneDHX36AuthorityHGNC:14410Mapping file id170506 NCBI fileEvidenceTAS
GeneDHX9AuthorityHGNC:2750Mapping file id1660 NCBI fileEvidenceTAS
GeneDTX4AuthorityHGNC:29151Mapping file id23220 NCBI fileEvidenceTAS
GeneEP300AuthorityHGNC:3373Mapping file id2033 NCBI fileEvidenceTAS
GeneIFI16AuthorityHGNC:5395Mapping file id3428 NCBI fileEvidenceTAS
GeneIKBKBAuthorityHGNC:5960Mapping file id3551 NCBI fileEvidenceTAS
GeneIKBKGAuthorityHGNC:5961Mapping file id8517 NCBI fileEvidenceTAS
GeneIRF3AuthorityHGNC:6118Mapping file id3661 NCBI fileEvidenceIEA, TAS
GeneIRF7AuthorityHGNC:6122Mapping file id3665 NCBI fileEvidenceTAS
GeneLRRFIP1AuthorityHGNC:6702Mapping file id9208 NCBI fileEvidenceTAS
GeneMRE11AuthorityHGNC:7230Mapping file id4361 NCBI fileEvidenceTAS
GeneMYD88AuthorityHGNC:7562Mapping file id4615 NCBI fileEvidenceTAS
GeneNFKB1AuthorityHGNC:7794Mapping file id4790 NCBI fileEvidenceTAS
GeneNFKB2AuthorityHGNC:7795Mapping file id4791 NCBI fileEvidenceTAS
GeneNFKBIAAuthorityHGNC:7797Mapping file id4792 NCBI fileEvidenceTAS
GeneNFKBIBAuthorityHGNC:7798Mapping file id4793 NCBI fileEvidenceTAS
GeneNKIRAS1AuthorityHGNC:17899Mapping file id28512 NCBI fileEvidenceTAS
GeneNKIRAS2AuthorityHGNC:17898Mapping file id28511 NCBI fileEvidenceTAS
GeneNLRC3AuthorityHGNC:29889Mapping file id197358 NCBI fileEvidenceTAS
GeneNLRP4AuthorityHGNC:22943Mapping file id147945 NCBI fileEvidenceTAS
GenePOLR1CAuthorityHGNC:20194Mapping file id9533 NCBI fileEvidenceTAS
GenePOLR1DAuthorityHGNC:20422Mapping file id51082 NCBI fileEvidenceTAS
GenePOLR2EAuthorityHGNC:9192Mapping file id5434 NCBI fileEvidenceTAS
GenePOLR2FAuthorityHGNC:9193Mapping file id5435 NCBI fileEvidenceTAS
GenePOLR2HAuthorityHGNC:9195Mapping file id5437 NCBI fileEvidenceTAS
GenePOLR2KAuthorityHGNC:9198Mapping file id5440 NCBI fileEvidenceTAS
GenePOLR2LAuthorityHGNC:9199Mapping file id5441 NCBI fileEvidenceTAS
GenePOLR3AAuthorityHGNC:30074Mapping file id11128 NCBI fileEvidenceTAS
GenePOLR3BAuthorityHGNC:30348Mapping file id55703 NCBI fileEvidenceTAS
GenePOLR3CAuthorityHGNC:30076Mapping file id10623 NCBI fileEvidenceTAS
GenePOLR3DAuthorityHGNC:1080Mapping file id661 NCBI fileEvidenceTAS
GenePOLR3EAuthorityHGNC:30347Mapping file id55718 NCBI fileEvidenceTAS
GenePOLR3FAuthorityHGNC:15763Mapping file id10621 NCBI fileEvidenceTAS
GenePOLR3GAuthorityHGNC:30075Mapping file id10622 NCBI fileEvidenceTAS
GenePOLR3GLAuthorityHGNC:28466Mapping file id84265 NCBI fileEvidenceTAS
GenePOLR3HAuthorityHGNC:30349Mapping file id171568 NCBI fileEvidenceTAS
GenePOLR3KAuthorityHGNC:14121Mapping file id51728 NCBI fileEvidenceTAS
GenePRKDCAuthorityHGNC:9413Mapping file id5591 NCBI fileEvidenceTAS
GeneRELAAuthorityHGNC:9955Mapping file id5970 NCBI fileEvidenceTAS
GeneRIPK1AuthorityHGNC:10019Mapping file id8737 NCBI fileEvidenceTAS
GeneRIPK3AuthorityHGNC:10021Mapping file id11035 NCBI fileEvidenceTAS
GeneRPS27AAuthorityHGNC:10417Mapping file id6233 NCBI fileEvidenceTAS
GeneSTAT6AuthorityHGNC:11368Mapping file id6778 NCBI fileEvidenceTAS
GeneSTING1AuthorityHGNC:27962Mapping file id340061 NCBI fileEvidenceTAS
GeneTBK1AuthorityHGNC:11584Mapping file id29110 NCBI fileEvidenceIEA, TAS
GeneTICAM1AuthorityHGNC:18348Mapping file id148022 NCBI fileEvidenceTAS
GeneTLR3AuthorityHGNC:11849Mapping file id7098 NCBI fileEvidenceTAS
GeneTREX1AuthorityHGNC:12269Mapping file id11277 NCBI fileEvidenceTAS
GeneTRIM21AuthorityHGNC:11312Mapping file id6737 NCBI fileEvidenceTAS
GeneTRIM32AuthorityHGNC:16380Mapping file id22954 NCBI fileEvidenceTAS
GeneTRIM56AuthorityHGNC:19028Mapping file id81844 NCBI fileEvidenceTAS
GeneUBA52AuthorityHGNC:12458Mapping file id7311 NCBI fileEvidenceTAS
GeneUBBAuthorityHGNC:12463Mapping file id7314 NCBI fileEvidenceTAS
GeneUBCAuthorityHGNC:12468Mapping file id7316 NCBI fileEvidenceTAS
GeneXRCC5AuthorityHGNC:12833Mapping file id7520 NCBI fileEvidenceTAS
GeneXRCC6AuthorityHGNC:4055Mapping file id2547 NCBI fileEvidenceTAS
GeneZBP1AuthorityHGNC:16176Mapping file id81030 NCBI fileEvidenceIEA, TAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.