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Pathway Human Homo sapiens

PKMTs methylate histone lysines

R-HSA-3214841 in Reactome release 97: under Chromatin modifying enzymes, with 70 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-3214841 (mouse), R-RNO-3214841 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 70 genes in this human pathway; showing 1 to 70, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 1
GeneAEBP2AuthorityHGNC:24051Mapping file id121536 NCBI fileEvidenceTAS
GeneASH1LAuthorityHGNC:19088Mapping file id55870 NCBI fileEvidenceTAS
GeneASH2LAuthorityHGNC:744Mapping file id9070 NCBI fileEvidenceTAS
GeneATF7IPAuthorityHGNC:20092Mapping file id55729 NCBI fileEvidenceTAS
GeneDOT1LAuthorityHGNC:24948Mapping file id84444 NCBI fileEvidenceTAS
GeneDPY30AuthorityHGNC:24590Mapping file id84661 NCBI fileEvidenceTAS
GeneEEDAuthorityHGNC:3188Mapping file id8726 NCBI fileEvidenceTAS
GeneEHMT1AuthorityHGNC:24650Mapping file id79813 NCBI fileEvidenceTAS
GeneEHMT2AuthorityHGNC:14129Mapping file id10919 NCBI fileEvidenceTAS
GeneEZH2AuthorityHGNC:3527Mapping file id2146 NCBI fileEvidenceTAS
GeneH3C1AuthorityHGNC:4766Mapping file id8350 NCBI fileEvidenceTAS
GeneH3C10AuthorityHGNC:4775Mapping file id8357 NCBI fileEvidenceTAS
GeneH3C11AuthorityHGNC:4771Mapping file id8354 NCBI fileEvidenceTAS
GeneH3C12AuthorityHGNC:4774Mapping file id8356 NCBI fileEvidenceTAS
GeneH3C13AuthorityHGNC:25311Mapping file id653604 NCBI fileEvidenceTAS
GeneH3C14AuthorityHGNC:20503Mapping file id126961 NCBI fileEvidenceTAS
GeneH3C15AuthorityHGNC:20505Mapping file id333932 NCBI fileEvidenceTAS
GeneH3C2AuthorityHGNC:4776Mapping file id8358 NCBI fileEvidenceTAS
GeneH3C3AuthorityHGNC:4768Mapping file id8352 NCBI fileEvidenceTAS
GeneH3C4AuthorityHGNC:4767Mapping file id8351 NCBI fileEvidenceTAS
GeneH3C6AuthorityHGNC:4769Mapping file id8353 NCBI fileEvidenceTAS
GeneH3C7AuthorityHGNC:4773Mapping file id8968 NCBI fileEvidenceTAS
GeneH3C8AuthorityHGNC:4772Mapping file id8355 NCBI fileEvidenceTAS
GeneH4C1AuthorityHGNC:4781Mapping file id8359 NCBI fileEvidenceTAS
GeneH4C11AuthorityHGNC:4785Mapping file id8363 NCBI fileEvidenceTAS
GeneH4C12AuthorityHGNC:4784Mapping file id8362 NCBI fileEvidenceTAS
GeneH4C13AuthorityHGNC:4791Mapping file id8368 NCBI fileEvidenceTAS
GeneH4C14AuthorityHGNC:4794Mapping file id8370 NCBI fileEvidenceTAS
GeneH4C15AuthorityHGNC:29607Mapping file id554313 NCBI fileEvidenceTAS
GeneH4C16AuthorityHGNC:20510Mapping file id121504 NCBI fileEvidenceTAS
GeneH4C2AuthorityHGNC:4789Mapping file id8366 NCBI fileEvidenceTAS
GeneH4C3AuthorityHGNC:4787Mapping file id8364 NCBI fileEvidenceTAS
GeneH4C4AuthorityHGNC:4782Mapping file id8360 NCBI fileEvidenceTAS
GeneH4C5AuthorityHGNC:4790Mapping file id8367 NCBI fileEvidenceTAS
GeneH4C6AuthorityHGNC:4783Mapping file id8361 NCBI fileEvidenceTAS
GeneH4C8AuthorityHGNC:4788Mapping file id8365 NCBI fileEvidenceTAS
GeneH4C9AuthorityHGNC:4793Mapping file id8294 NCBI fileEvidenceTAS
GeneKMT2AAuthorityHGNC:7132Mapping file id4297 NCBI fileEvidenceTAS
GeneKMT2BAuthorityHGNC:15840Mapping file id9757 NCBI fileEvidenceTAS
GeneKMT2CAuthorityHGNC:13726Mapping file id58508 NCBI fileEvidenceTAS
GeneKMT2DAuthorityHGNC:7133Mapping file id8085 NCBI fileEvidenceTAS
GeneKMT5AAuthorityHGNC:29489Mapping file id387893 NCBI fileEvidenceTAS
GeneKMT5BAuthorityHGNC:24283Mapping file id51111 NCBI fileEvidenceTAS
GeneKMT5CAuthorityHGNC:28405Mapping file id84787 NCBI fileEvidenceTAS
GeneMECOMAuthorityHGNC:3498Mapping file id2122 NCBI fileEvidenceTAS
GeneNFKB1AuthorityHGNC:7794Mapping file id4790 NCBI fileEvidenceTAS
GeneNFKB2AuthorityHGNC:7795Mapping file id4791 NCBI fileEvidenceTAS
GeneNSD1AuthorityHGNC:14234Mapping file id64324 NCBI fileEvidenceTAS
GeneNSD2AuthorityHGNC:12766Mapping file id7468 NCBI fileEvidenceTAS
GeneNSD3AuthorityHGNC:12767Mapping file id54904 NCBI fileEvidenceTAS
GenePRDM16AuthorityHGNC:14000Mapping file id63976 NCBI fileEvidenceTAS
GenePRDM9AuthorityHGNC:13994Mapping file id56979 NCBI fileEvidenceTAS
GeneRBBP4AuthorityHGNC:9887Mapping file id5928 NCBI fileEvidenceTAS
GeneRBBP5AuthorityHGNC:9888Mapping file id5929 NCBI fileEvidenceTAS
GeneRBBP7AuthorityHGNC:9890Mapping file id5931 NCBI fileEvidenceTAS
GeneRELAAuthorityHGNC:9955Mapping file id5970 NCBI fileEvidenceTAS
GeneSETD1AAuthorityHGNC:29010Mapping file id9739 NCBI fileEvidenceTAS
GeneSETD1BAuthorityHGNC:29187Mapping file id23067 NCBI fileEvidenceTAS
GeneSETD2AuthorityHGNC:18420Mapping file id29072 NCBI fileEvidenceTAS
GeneSETD3AuthorityHGNC:20493Mapping file id84193 NCBI fileEvidenceTAS
GeneSETD6AuthorityHGNC:26116Mapping file id79918 NCBI fileEvidenceTAS
GeneSETD7AuthorityHGNC:30412Mapping file id80854 NCBI fileEvidenceTAS
GeneSETDB1AuthorityHGNC:10761Mapping file id9869 NCBI fileEvidenceTAS
GeneSETDB2AuthorityHGNC:20263Mapping file id83852 NCBI fileEvidenceTAS
GeneSMYD2AuthorityHGNC:20982Mapping file id56950 NCBI fileEvidenceTAS
GeneSMYD3AuthorityHGNC:15513Mapping file id64754 NCBI fileEvidenceTAS
GeneSUV39H1AuthorityHGNC:11479Mapping file id6839 NCBI fileEvidenceTAS
GeneSUV39H2AuthorityHGNC:17287Mapping file id79723 NCBI fileEvidenceTAS
GeneSUZ12AuthorityHGNC:17101Mapping file id23512 NCBI fileEvidenceTAS
GeneWDR5AuthorityHGNC:12757Mapping file id11091 NCBI fileEvidenceTAS

Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.