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Pathway Human Homo sapiens

Deactivation of the beta-catenin transactivating complex

R-HSA-3769402 in Reactome release 97: under TCF dependent signaling in response to WNT, with 44 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-3769402 (mouse), R-RNO-3769402 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 44 genes in this human pathway; showing 1 to 44, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 1
GeneAKT1AuthorityHGNC:391Mapping file id207 NCBI fileEvidenceTAS
GeneAKT2AuthorityHGNC:392Mapping file id208 NCBI fileEvidenceTAS
GeneAPCAuthorityHGNC:583Mapping file id324 NCBI fileEvidenceTAS
GeneASH2LAuthorityHGNC:744Mapping file id9070 NCBI fileEvidenceTAS
GeneBCL9AuthorityHGNC:1008Mapping file id607 NCBI fileEvidenceTAS
GeneBCL9LAuthorityHGNC:23688Mapping file id283149 NCBI fileEvidenceTAS
GeneBTRCAuthorityHGNC:1144Mapping file id8945 NCBI fileEvidenceTAS
GeneCBY1AuthorityHGNC:1307Mapping file id25776 NCBI fileEvidenceTAS
GeneCHD8AuthorityHGNC:20153Mapping file id57680 NCBI fileEvidenceTAS
GeneCTBP1AuthorityHGNC:2494Mapping file id1487 NCBI fileEvidenceTAS
GeneCTNNB1AuthorityHGNC:2514Mapping file id1499 NCBI fileEvidenceTAS
GeneCTNNBIP1AuthorityHGNC:16913Mapping file id56998 NCBI fileEvidenceTAS
GeneDPY30AuthorityHGNC:24590Mapping file id84661 NCBI fileEvidenceTAS
GeneHDAC1AuthorityHGNC:4852Mapping file id3065 NCBI fileEvidenceTAS
GeneKMT2BAuthorityHGNC:15840Mapping file id9757 NCBI fileEvidenceTAS
GeneLEF1AuthorityHGNC:6551Mapping file id51176 NCBI fileEvidenceTAS
GeneMEN1AuthorityHGNC:7010Mapping file id4221 NCBI fileEvidenceTAS
GenePYGO1AuthorityHGNC:30256Mapping file id26108 NCBI fileEvidenceTAS
GenePYGO2AuthorityHGNC:30257Mapping file id90780 NCBI fileEvidenceTAS
GeneRBBP5AuthorityHGNC:9888Mapping file id5929 NCBI fileEvidenceTAS
GeneRPS27AAuthorityHGNC:10417Mapping file id6233 NCBI fileEvidenceTAS
GeneSOX13AuthorityHGNC:11192Mapping file id9580 NCBI fileEvidenceTAS
GeneSOX17AuthorityHGNC:18122Mapping file id64321 NCBI fileEvidenceTAS
GeneSOX2AuthorityHGNC:11195Mapping file id6657 NCBI fileEvidenceTAS
GeneSOX3AuthorityHGNC:11199Mapping file id6658 NCBI fileEvidenceTAS
GeneSOX4AuthorityHGNC:11200Mapping file id6659 NCBI fileEvidenceTAS
GeneSOX6AuthorityHGNC:16421Mapping file id55553 NCBI fileEvidenceTAS
GeneSOX7AuthorityHGNC:18196Mapping file id83595 NCBI fileEvidenceTAS
GeneSOX9AuthorityHGNC:11204Mapping file id6662 NCBI fileEvidenceTAS
GeneSRYAuthorityHGNC:11311Mapping file id6736 NCBI fileEvidenceTAS
GeneTCF7AuthorityHGNC:11639Mapping file id6932 NCBI fileEvidenceTAS
GeneTCF7L1AuthorityHGNC:11640Mapping file id83439 NCBI fileEvidenceTAS
GeneTCF7L2AuthorityHGNC:11641Mapping file id6934 NCBI fileEvidenceTAS
GeneTLE1AuthorityHGNC:11837Mapping file id7088 NCBI fileEvidenceTAS
GeneTLE2AuthorityHGNC:11838Mapping file id7089 NCBI fileEvidenceTAS
GeneTLE3AuthorityHGNC:11839Mapping file id7090 NCBI fileEvidenceTAS
GeneTLE4AuthorityHGNC:11840Mapping file id7091 NCBI fileEvidenceTAS
GeneUBA52AuthorityHGNC:12458Mapping file id7311 NCBI fileEvidenceTAS
GeneUBBAuthorityHGNC:12463Mapping file id7314 NCBI fileEvidenceTAS
GeneUBCAuthorityHGNC:12468Mapping file id7316 NCBI fileEvidenceTAS
GeneWDR5AuthorityHGNC:12757Mapping file id11091 NCBI fileEvidenceTAS
GeneXIAPAuthorityHGNC:592Mapping file id331 NCBI fileEvidenceTAS
GeneXPO1AuthorityHGNC:12825Mapping file id7514 NCBI fileEvidenceTAS
GeneYWHAZAuthorityHGNC:12855Mapping file id7534 NCBI fileEvidenceTAS

Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.