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Order

Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Deactivation of the beta-catenin transactivating complex

R-MMU-3769402 in Reactome release 97: under TCF dependent signaling in response to WNT, with 34 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-3769402 (human), R-RNO-3769402 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 34 genes in this mouse pathway; showing 1 to 34, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 1 of 1
GeneAkt1Authority11651Mapping file id11651 NCBI fileEvidenceIEA
GeneAkt2Authority11652Mapping file id11652 NCBI fileEvidenceIEA
GeneApcAuthority11789Mapping file idENSMUSG00000005871 Ensembl fileEvidenceIEA
GeneCby1Authority73739Mapping file id73739 NCBI fileEvidenceIEA
GeneChd8Authority67772Mapping file id67772 NCBI fileEvidenceIEA
GeneCtbp1Authority13016Mapping file id13016 NCBI fileEvidenceIEA
GeneCtnnb1Authority12387Mapping file id12387 NCBI fileEvidenceIEA
GeneCtnnbip1Authority67087Mapping file id67087 NCBI fileEvidenceIEA
GeneHdac1Authority433759Mapping file id433759 NCBI fileEvidenceIEA
GeneLef1Authority16842Mapping file id16842 NCBI fileEvidenceIEA
GeneRps27aAuthority78294Mapping file id78294 NCBI fileEvidenceIEA
GeneSox13Authority20668Mapping file id20668 NCBI fileEvidenceIEA
GeneSox17Authority20671Mapping file id20671 NCBI fileEvidenceIEA
GeneSox2Authority20674Mapping file id20674 NCBI fileEvidenceIEA
GeneSox3Authority20675Mapping file idENSMUSG00000045179 Ensembl fileEvidenceIEA
GeneSox4Authority20677Mapping file id20677 NCBI fileEvidenceIEA
GeneSox6Authority20679Mapping file id20679 NCBI fileEvidenceIEA
GeneSox7Authority20680Mapping file id20680 NCBI fileEvidenceIEA
GeneSox9Authority20682Mapping file id20682 NCBI fileEvidenceIEA
GeneSryAuthority21674Mapping file id21674 NCBI fileEvidenceIEA
GeneTcf7Authority21414Mapping file id21414 NCBI fileEvidenceIEA
GeneTcf7l1Authority21415Mapping file id21415 NCBI fileEvidenceIEA
GeneTcf7l2Authority21416Mapping file id21416 NCBI fileEvidenceIEA
GeneTle1Authority21885Mapping file id21885 NCBI fileEvidenceIEA
GeneTle2Authority21886Mapping file id21886 NCBI fileEvidenceIEA
GeneTle3Authority21887Mapping file id21887 NCBI fileEvidenceIEA
GeneTle4Authority21888Mapping file id21888 NCBI fileEvidenceIEA
GeneUba52Authority22186Mapping file id22186 NCBI fileEvidenceIEA
GeneUba52rtAuthority666586Mapping file idENSMUSG00000068240 Ensembl fileEvidenceIEA
GeneUbbAuthority22187Mapping file id22187 NCBI fileEvidenceIEA
GeneUbcAuthority22190Mapping file id22190 NCBI fileEvidenceIEA
GeneXiapAuthority11798Mapping file id11798 NCBI fileEvidenceIEA
GeneXpo1Authority103573Mapping file id103573 NCBI fileEvidenceIEA
GeneYwhazAuthority22631Mapping file id22631 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.