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Pathway Human Homo sapiens

Epigenetic regulation by WDR5-containing histone modifying complexes

R-HSA-9917777 in Reactome release 97: under Epigenetic regulation of gene expression, with 166 genes placed in it by the mapping files and 2 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-9917777 (mouse), R-RNO-9917777 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 166 genes in this human pathway; showing 101 to 166, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 2 of 2
GeneKMT2DAuthorityHGNC:7133Mapping file id8085 NCBI fileEvidenceIEA, TAS
GeneLIPEAuthorityHGNC:6621Mapping file id3991 NCBI fileEvidenceIEA
GeneLPIN1AuthorityHGNC:13345Mapping file id23175 NCBI fileEvidenceIEA
GeneLPLAuthorityHGNC:6677Mapping file id4023 NCBI fileEvidenceIEA
GeneMBIPAuthorityHGNC:20427Mapping file id51562 NCBI fileEvidenceTAS
GeneMCRS1AuthorityHGNC:6960Mapping file id10445 NCBI fileEvidenceTAS
GeneMED1AuthorityHGNC:9234Mapping file id5469 NCBI fileEvidenceIEA, TAS
GeneMED10AuthorityHGNC:28760Mapping file id84246 NCBI fileEvidenceIEA, TAS
GeneMED12AuthorityHGNC:11957Mapping file id9968 NCBI fileEvidenceIEA, TAS
GeneMED13AuthorityHGNC:22474Mapping file id9969 NCBI fileEvidenceIEA, TAS
GeneMED14AuthorityHGNC:2370Mapping file id9282 NCBI fileEvidenceIEA, TAS
GeneMED16AuthorityHGNC:17556Mapping file id10025 NCBI fileEvidenceIEA, TAS
GeneMED17AuthorityHGNC:2375Mapping file id9440 NCBI fileEvidenceIEA, TAS
GeneMED20AuthorityHGNC:16840Mapping file id9477 NCBI fileEvidenceIEA, TAS
GeneMED23AuthorityHGNC:2372Mapping file id9439 NCBI fileEvidenceIEA, TAS
GeneMED24AuthorityHGNC:22963Mapping file id9862 NCBI fileEvidenceIEA, TAS
GeneMED27AuthorityHGNC:2377Mapping file id9442 NCBI fileEvidenceIEA, TAS
GeneMED30AuthorityHGNC:23032Mapping file id90390 NCBI fileEvidenceIEA, TAS
GeneMED31AuthorityHGNC:24260Mapping file id51003 NCBI fileEvidenceIEA, TAS
GeneMED4AuthorityHGNC:17903Mapping file id29079 NCBI fileEvidenceIEA, TAS
GeneMED6AuthorityHGNC:19970Mapping file id10001 NCBI fileEvidenceIEA, TAS
GeneMED7AuthorityHGNC:2378Mapping file id9443 NCBI fileEvidenceIEA, TAS
GeneMEN1AuthorityHGNC:7010Mapping file id4221 NCBI fileEvidenceTAS
GeneMGLLAuthorityHGNC:17038Mapping file id11343 NCBI fileEvidenceIEA
GeneNCOA1AuthorityHGNC:7668Mapping file id8648 NCBI fileEvidenceIEA, TAS
GeneNCOA2AuthorityHGNC:7669Mapping file id10499 NCBI fileEvidenceIEA, TAS
GeneNCOA3AuthorityHGNC:7670Mapping file id8202 NCBI fileEvidenceIEA, TAS
GeneNCOA6AuthorityHGNC:15936Mapping file id23054 NCBI fileEvidenceIEA, TAS
GeneNCOR1AuthorityHGNC:7672Mapping file id9611 NCBI fileEvidenceIEA, TAS
GeneNCOR2AuthorityHGNC:7673Mapping file id9612 NCBI fileEvidenceIEA, TAS
GeneNR5A2AuthorityHGNC:7984Mapping file id2494 NCBI fileEvidenceIEA
GeneOGTAuthorityHGNC:8127Mapping file id8473 NCBI fileEvidenceTAS
GenePAGR1AuthorityHGNC:28707Mapping file id79447 NCBI fileEvidenceIEA, TAS
GenePAXIP1AuthorityHGNC:8624Mapping file id22976 NCBI fileEvidenceIEA, TAS
GenePDK4AuthorityHGNC:8812Mapping file id5166 NCBI fileEvidenceIEA
GenePEX11AAuthorityHGNC:8852Mapping file id8800 NCBI fileEvidenceIEA
GenePHF20AuthorityHGNC:16098Mapping file id51230 NCBI fileEvidenceTAS
GenePHF20L1AuthorityHGNC:24280Mapping file id51105 NCBI fileEvidenceTAS
GenePHLDA1AuthorityHGNC:8933Mapping file id22822 NCBI fileEvidenceIEA
GenePLIN1AuthorityHGNC:9076Mapping file id5346 NCBI fileEvidenceIEA
GenePLIN2AuthorityHGNC:248Mapping file id123 NCBI fileEvidenceIEA
GenePLIN4AuthorityHGNC:29393Mapping file id729359 NCBI fileEvidenceIEA
GenePNPLA2AuthorityHGNC:30802Mapping file id57104 NCBI fileEvidenceIEA
GenePPARGAuthorityHGNC:9236Mapping file id5468 NCBI fileEvidenceIEA, TAS
GenePPARGC1AAuthorityHGNC:9237Mapping file id10891 NCBI fileEvidenceIEA, TAS
GenePPARGC1BAuthorityHGNC:30022Mapping file id133522 NCBI fileEvidenceIEA, TAS
GenePSIP1AuthorityHGNC:9527Mapping file id11168 NCBI fileEvidenceTAS
GeneRB1AuthorityHGNC:9884Mapping file id5925 NCBI fileEvidenceTAS
GeneRBBP5AuthorityHGNC:9888Mapping file id5929 NCBI fileEvidenceIEA, TAS
GeneRXRAAuthorityHGNC:10477Mapping file id6256 NCBI fileEvidenceIEA, TAS
GeneSCDAuthorityHGNC:10571Mapping file id6319 NCBI fileEvidenceIEA
GeneSCD5AuthorityHGNC:21088Mapping file idENSG00000145284 Ensembl fileEvidenceIEA, TAS
GeneSETD1AAuthorityHGNC:29010Mapping file id9739 NCBI fileEvidenceTAS
GeneSETD1BAuthorityHGNC:29187Mapping file id23067 NCBI fileEvidenceTAS
GeneSGF29AuthorityHGNC:25156Mapping file id112869 NCBI fileEvidenceTAS
GeneSIRT1AuthorityHGNC:14929Mapping file id23411 NCBI fileEvidenceTAS
GeneTADA2AAuthorityHGNC:11531Mapping file id6871 NCBI fileEvidenceTAS
GeneTADA3AuthorityHGNC:19422Mapping file id10474 NCBI fileEvidenceTAS
GeneTASP1AuthorityHGNC:15859Mapping file id55617 NCBI fileEvidenceIEA, TAS
GeneTBL1XAuthorityHGNC:11585Mapping file id6907 NCBI fileEvidenceIEA, TAS
GeneTBL1XR1AuthorityHGNC:29529Mapping file id79718 NCBI fileEvidenceIEA, TAS
GeneTHRSPAuthorityHGNC:11800Mapping file id7069 NCBI fileEvidenceIEA
GeneWDR5AuthorityHGNC:12757Mapping file id11091 NCBI fileEvidenceIEA, TAS
GeneWDR82AuthorityHGNC:28826Mapping file id80335 NCBI fileEvidenceTAS
GeneYEATS2AuthorityHGNC:25489Mapping file id55689 NCBI fileEvidenceTAS
GeneZZZ3AuthorityHGNC:24523Mapping file id26009 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.