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Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Hemostasis

R-MMU-109582 in Reactome release 97: a top-level pathway, with 588 genes placed in it by the mapping files and 7 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-109582 (human), R-RNO-109582 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 588 genes in this mouse pathway; showing 501 to 588, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 6 of 6
GeneSerpinf2Authority18816Mapping file id18816 NCBI fileEvidenceIEA
GeneSerping1Authority12258Mapping file id12258 NCBI fileEvidenceIEA
GeneSh2b1Authority20399Mapping file id20399 NCBI fileEvidenceIEA
GeneSh2b2Authority23921Mapping file id23921 NCBI fileEvidenceIEA
GeneSh2b3Authority16923Mapping file id16923 NCBI fileEvidenceIEA
GeneShc1Authority20416Mapping file id20416 NCBI fileEvidenceIEA
GeneSirpaAuthority19261Mapping file id19261 NCBI fileEvidenceIEA
GeneSlc16a1Authority20501Mapping file id20501 NCBI fileEvidenceIEA
GeneSlc16a3Authority80879Mapping file id80879 NCBI fileEvidenceIEA
GeneSlc16a8Authority57274Mapping file id57274 NCBI fileEvidenceIEA
GeneSlc3a2Authority17254Mapping file id17254 NCBI fileEvidenceIEA
GeneSlc7a10Authority53896Mapping file id53896 NCBI fileEvidenceIEA
GeneSlc7a11Authority26570Mapping file id26570 NCBI fileEvidenceIEA
GeneSlc7a5Authority20539Mapping file id20539 NCBI fileEvidenceIEA
GeneSlc7a6Authority330836Mapping file id330836 NCBI fileEvidenceIEA
GeneSlc7a7Authority20540Mapping file id20540 NCBI fileEvidenceIEA
GeneSlc7a8Authority50934Mapping file id50934 NCBI fileEvidenceIEA
GeneSlc7a9Authority30962Mapping file id30962 NCBI fileEvidenceIEA
GeneSlc8a1Authority20541Mapping file id20541 NCBI fileEvidenceIEA
GeneSlc8a2Authority110891Mapping file id110891 NCBI fileEvidenceIEA
GeneSlc8a3Authority110893Mapping file id110893 NCBI fileEvidenceIEA
GeneSmpd1Authority20597Mapping file id20597 NCBI fileEvidenceIEA
GeneSod1Authority20655Mapping file id20655 NCBI fileEvidenceIEA
GeneSos1Authority20662Mapping file id20662 NCBI fileEvidenceIEA
GeneSparcAuthority20692Mapping file id20692 NCBI fileEvidenceIEA
GeneSpnAuthority20737Mapping file id20737 NCBI fileEvidenceIEA
GeneSpp2Authority75396Mapping file id75396 NCBI fileEvidenceIEA
GeneSrcAuthority20779Mapping file id20779 NCBI fileEvidenceIEA
GeneSrgnAuthority19073Mapping file id19073 NCBI fileEvidenceIEA
GeneSriAuthority109552Mapping file id109552 NCBI fileEvidenceIEA
GeneStx4aAuthority20909Mapping file id20909 NCBI fileEvidenceIEA
GeneStxbp2Authority20911Mapping file id20911 NCBI fileEvidenceIEA
GeneStxbp3Authority20912Mapping file id20912 NCBI fileEvidenceIEA
GeneSykAuthority20963Mapping file id20963 NCBI fileEvidenceIEA
GeneSytl4Authority27359Mapping file id27359 NCBI fileEvidenceIEA
GeneTagln2Authority21346Mapping file id21346 NCBI fileEvidenceIEA
GeneTbxa2rAuthority21390Mapping file id21390 NCBI fileEvidenceIEA
GeneTekAuthority21687Mapping file id21687 NCBI fileEvidenceIEA
GeneTex264Authority21767Mapping file id21767 NCBI fileEvidenceIEA
GeneTfpiAuthority21788Mapping file id21788 NCBI fileEvidenceIEA
GeneTgfb1Authority21803Mapping file id21803 NCBI fileEvidenceIEA
GeneTgfb2Authority21808Mapping file id21808 NCBI fileEvidenceIEA
GeneTgfb3Authority21809Mapping file idENSMUSG00000021253 Ensembl fileEvidenceIEA
GeneThbdAuthority21824Mapping file id21824 NCBI fileEvidenceIEA
GeneThbs1Authority21825Mapping file idENSMUSG00000040152 Ensembl fileEvidenceIEA
GeneTimp1Authority21857Mapping file id21857 NCBI fileEvidenceIEA
GeneTimp3Authority21859Mapping file id21859 NCBI fileEvidenceIEA
GeneTln1Authority21894Mapping file id21894 NCBI fileEvidenceIEA
GeneTmsb4xAuthority19241Mapping file id19241 NCBI fileEvidenceIEA
GeneTmx3Authority67988Mapping file id67988 NCBI fileEvidenceIEA
GeneTnfrsf10bAuthority21933Mapping file id21933 NCBI fileEvidenceIEA
GeneTor4aAuthority227612Mapping file id227612 NCBI fileEvidenceIEA
GeneTrem1Authority58217Mapping file id58217 NCBI fileEvidenceIEA
GeneTrfAuthority22041Mapping file id22041 NCBI fileEvidenceIEA
GeneTrpc3Authority22065Mapping file id22065 NCBI fileEvidenceIEA
GeneTrpc6Authority22068Mapping file id22068 NCBI fileEvidenceIEA
GeneTrpc7Authority26946Mapping file id26946 NCBI fileEvidenceIEA
GeneTuba1aAuthority22142Mapping file id22142 NCBI fileEvidenceIEA
GeneTuba1bAuthority22143Mapping file id22143 NCBI fileEvidenceIEA
GeneTuba1cAuthority22146Mapping file id22146 NCBI fileEvidenceIEA
GeneTuba3aAuthority22144Mapping file id22144 NCBI fileEvidenceIEA
GeneTuba3bAuthority22147Mapping file id22147 NCBI fileEvidenceIEA
GeneTuba4aAuthority22145Mapping file id22145 NCBI fileEvidenceIEA
GeneTuba8Authority53857Mapping file id53857 NCBI fileEvidenceIEA
GeneTubal3Authority238463Mapping file id238463 NCBI fileEvidenceIEA
GeneTubb1Authority545486Mapping file id545486 NCBI fileEvidenceIEA
GeneTubb2aAuthority22151Mapping file id22151 NCBI fileEvidenceIEA
GeneTubb2bAuthority73710Mapping file id73710 NCBI fileEvidenceIEA
GeneTubb3Authority22152Mapping file id22152 NCBI fileEvidenceIEA
GeneTubb4aAuthority22153Mapping file id22153 NCBI fileEvidenceIEA
GeneTubb4bAuthority227613Mapping file id227613 NCBI fileEvidenceIEA
GeneTubb6Authority67951Mapping file id67951 NCBI fileEvidenceIEA
GeneVav1Authority22324Mapping file id22324 NCBI fileEvidenceIEA
GeneVav2Authority22325Mapping file id22325 NCBI fileEvidenceIEA
GeneVav3Authority57257Mapping file id57257 NCBI fileEvidenceIEA
GeneVclAuthority22330Mapping file id22330 NCBI fileEvidenceIEA
GeneVegfaAuthority22339Mapping file id22339 NCBI fileEvidenceIEA
GeneVegfbAuthority22340Mapping file id22340 NCBI fileEvidenceIEA
GeneVegfcAuthority22341Mapping file id22341 NCBI fileEvidenceIEA
GeneVegfdAuthority14205Mapping file id14205 NCBI fileEvidenceIEA
GeneVps45Authority22365Mapping file id22365 NCBI fileEvidenceIEA
GeneVti1bAuthority53612Mapping file idENSMUSG00000021124 Ensembl fileEvidenceIEA
GeneVwfAuthority22371Mapping file id22371 NCBI fileEvidenceIEA
GeneWdr1Authority22388Mapping file id22388 NCBI fileEvidenceIEA
GeneYes1Authority22612Mapping file id22612 NCBI fileEvidenceIEA
GeneYwhazAuthority22631Mapping file id22631 NCBI fileEvidenceIEA
GeneZfpm1Authority22761Mapping file id22761 NCBI fileEvidenceIEA
GeneZfpm2Authority22762Mapping file id22762 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.