Pathway Mouse Mus musculus
Read this first
PIP3 activates AKT signaling
R-MMU-1257604 in Reactome release 97: under Intracellular signaling by second messengers, with 235 genes placed in it by the mapping files and 4 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-1257604 (human), R-RNO-1257604 (rat). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists.
[R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments.
[R11]
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this mouse pathway
The mapping files place 235 genes in this mouse pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneAdrm1 | Authority56436 | Mapping file id56436 NCBI file | EvidenceIEA |
| GeneAkt1 | Authority11651 | Mapping file id11651 NCBI file | EvidenceIEA |
| GeneAkt1s1 | Authority67605 | Mapping file id67605 NCBI file | EvidenceIEA |
| GeneAkt2 | Authority11652 | Mapping file id11652 NCBI file | EvidenceIEA |
| GeneAkt3 | Authority23797 | Mapping file id23797 NCBI file | EvidenceIEA |
| GeneAreg | Authority11839 | Mapping file id11839 NCBI file | EvidenceIEA |
| GeneBdnf | Authority12064 | Mapping file id12064 NCBI file | EvidenceIEA |
| GeneBmi1 | Authority12151 | Mapping file id12151 NCBI file | EvidenceIEA |
| GeneBtc | Authority12223 | Mapping file id12223 NCBI file | EvidenceIEA |
| GeneCasp9 | Authority12371 | Mapping file id12371 NCBI file | EvidenceIEA |
| GeneCbx2 | Authority12416 | Mapping file id12416 NCBI file | EvidenceIEA |
| GeneCbx4 | Authority12418 | Mapping file id12418 NCBI file | EvidenceIEA |
| GeneCbx6 | Authority494448 | Mapping file id494448 NCBI file | EvidenceIEA |
| GeneCbx8 | Authority30951 | Mapping file id30951 NCBI file | EvidenceIEA |
| GeneCd19 | Authority12478 | Mapping file id12478 NCBI file | EvidenceIEA |
| GeneCd28 | Authority12487 | Mapping file id12487 NCBI file | EvidenceIEA |
| GeneCd80 | Authority12519 | Mapping file id12519 NCBI file | EvidenceIEA |
| GeneCd86 | Authority12524 | Mapping file id12524 NCBI file | EvidenceIEA |
| GeneCdkn1a | Authority12575 | Mapping file id12575 NCBI file | EvidenceIEA |
| GeneCdkn1b | Authority12576 | Mapping file id12576 NCBI file | EvidenceIEA |
| GeneChd3 | Authority216848 | Mapping file id216848 NCBI file | EvidenceIEA |
| GeneChd4 | Authority107932 | Mapping file id107932 NCBI file | EvidenceIEA |
| GeneChuk | Authority12675 | Mapping file idENSMUSG00000025199 Ensembl file | EvidenceIEA |
| GeneCreb1 | Authority12912 | Mapping file id12912 NCBI file | EvidenceIEA |
| GeneCsnk2a1 | Authority12995 | Mapping file id12995 NCBI file | EvidenceIEA |
| GeneCsnk2a2 | Authority13000 | Mapping file id13000 NCBI file | EvidenceIEA |
| GeneCsnk2b | Authority13001 | Mapping file id13001 NCBI file | EvidenceIEA |
| GeneEed | Authority13626 | Mapping file id13626 NCBI file | EvidenceIEA |
| GeneEgf | Authority13645 | Mapping file id13645 NCBI file | EvidenceIEA |
| GeneEgfr | Authority13649 | Mapping file id13649 NCBI file | EvidenceIEA |
| GeneEpgn | Authority71920 | Mapping file id71920 NCBI file | EvidenceIEA |
| GeneErbb2 | Authority13866 | Mapping file id13866 NCBI file | EvidenceIEA |
| GeneErbb3 | Authority13867 | Mapping file id13867 NCBI file | EvidenceIEA |
| GeneErbb4 | Authority13869 | Mapping file id13869 NCBI file | EvidenceIEA |
| GeneEreg | Authority13874 | Mapping file id13874 NCBI file | EvidenceIEA |
| GeneEsr1 | Authority13982 | Mapping file id13982 NCBI file | EvidenceIEA |
| GeneEsr2 | Authority13983 | Mapping file id13983 NCBI file | EvidenceIEA |
| GeneEzh2 | Authority14056 | Mapping file id14056 NCBI file | EvidenceIEA |
| GeneFgf1 | Authority14164 | Mapping file id14164 NCBI file | EvidenceIEA |
| GeneFgf10 | Authority14165 | Mapping file id14165 NCBI file | EvidenceIEA |
| GeneFgf15 | Authority14170 | Mapping file id14170 NCBI file | EvidenceIEA |
| GeneFgf16 | Authority80903 | Mapping file id80903 NCBI file | EvidenceIEA |
| GeneFgf17 | Authority14171 | Mapping file id14171 NCBI file | EvidenceIEA |
| GeneFgf18 | Authority14172 | Mapping file id14172 NCBI file | EvidenceIEA |
| GeneFgf2 | Authority14173 | Mapping file id14173 NCBI file | EvidenceIEA |
| GeneFgf20 | Authority80857 | Mapping file id80857 NCBI file | EvidenceIEA |
| GeneFgf22 | Authority67112 | Mapping file id67112 NCBI file | EvidenceIEA |
| GeneFgf23 | Authority64654 | Mapping file id64654 NCBI file | EvidenceIEA |
| GeneFgf3 | Authority14174 | Mapping file idENSMUSG00000031074 Ensembl file | EvidenceIEA |
| GeneFgf4 | Authority14175 | Mapping file id14175 NCBI file | EvidenceIEA |
| GeneFgf5 | Authority14176 | Mapping file id14176 NCBI file | EvidenceIEA |
| GeneFgf6 | Authority14177 | Mapping file id14177 NCBI file | EvidenceIEA |
| GeneFgf7 | Authority14178 | Mapping file id14178 NCBI file | EvidenceIEA |
| GeneFgf8 | Authority14179 | Mapping file id14179 NCBI file | EvidenceIEA |
| GeneFgf9 | Authority14180 | Mapping file id14180 NCBI file | EvidenceIEA |
| GeneFgfr1 | Authority14182 | Mapping file id14182 NCBI file | EvidenceIEA |
| GeneFgfr2 | Authority14183 | Mapping file id14183 NCBI file | EvidenceIEA |
| GeneFgfr3 | Authority14184 | Mapping file idENSMUSG00000054252 Ensembl file | EvidenceIEA |
| GeneFgfr4 | Authority14186 | Mapping file id14186 NCBI file | EvidenceIEA |
| GeneFlt3 | Authority14255 | Mapping file id14255 NCBI file | EvidenceIEA |
| GeneFlt3l | Authority14256 | Mapping file id14256 NCBI file | EvidenceIEA |
| GeneFoxo1 | Authority56458 | Mapping file id56458 NCBI file | EvidenceIEA |
| GeneFoxo3 | Authority56484 | Mapping file id56484 NCBI file | EvidenceIEA |
| GeneFoxo4 | Authority54601 | Mapping file id54601 NCBI file | EvidenceIEA |
| GeneFoxo6 | Authority329934 | Mapping file id329934 NCBI file | EvidenceIEA |
| GeneFrk | Authority14302 | Mapping file id14302 NCBI file | EvidenceIEA |
| GeneFrs2 | Authority327826 | Mapping file id327826 NCBI file | EvidenceIEA |
| GeneFyn | Authority14360 | Mapping file id14360 NCBI file | EvidenceIEA |
| GeneGab1 | Authority14388 | Mapping file id14388 NCBI file | EvidenceIEA |
| GeneGatad2a | Authority234366 | Mapping file id234366 NCBI file | EvidenceIEA |
| GeneGatad2b | Authority229542 | Mapping file id229542 NCBI file | EvidenceIEA |
| GeneGrb2 | Authority14784 | Mapping file id14784 NCBI file | EvidenceIEA |
| GeneHbegf | Authority15200 | Mapping file id15200 NCBI file | EvidenceIEA |
| GeneHdac1 | Authority433759 | Mapping file id433759 NCBI file | EvidenceIEA |
| GeneHdac2 | Authority15182 | Mapping file id15182 NCBI file | EvidenceIEA |
| GeneHgf | Authority15234 | Mapping file id15234 NCBI file | EvidenceIEA |
| GeneIcos | Authority54167 | Mapping file id54167 NCBI file | EvidenceIEA |
| GeneIer3 | Authority15937 | Mapping file id15937 NCBI file | EvidenceIEA |
| GeneIl1rap | Authority16180 | Mapping file id16180 NCBI file | EvidenceIEA |
| GeneIl1rl1 | Authority17082 | Mapping file id17082 NCBI file | EvidenceIEA |
| GeneIl33 | Authority77125 | Mapping file id77125 NCBI file | EvidenceIEA |
| GeneIns1 | Authority16333 | Mapping file id16333 NCBI file | EvidenceIEA |
| GeneIns2 | Authority16334 | Mapping file id16334 NCBI file | EvidenceIEA |
| GeneInsr | Authority16337 | Mapping file id16337 NCBI file | EvidenceIEA |
| GeneIrak1 | Authority16179 | Mapping file id16179 NCBI file | EvidenceIEA |
| GeneIrak4 | Authority266632 | Mapping file id266632 NCBI file | EvidenceIEA |
| GeneIrs1 | Authority16367 | Mapping file id16367 NCBI file | EvidenceIEA |
| GeneIrs2 | Authority384783 | Mapping file id384783 NCBI file | EvidenceIEA |
| GeneKit | Authority16590 | Mapping file id16590 NCBI file | EvidenceIEA |
| GeneKitl | Authority17311 | Mapping file id17311 NCBI file | EvidenceIEA |
| GeneKl | Authority16591 | Mapping file id16591 NCBI file | EvidenceIEA |
| GeneKlb | Authority83379 | Mapping file id83379 NCBI file | EvidenceIEA |
| GeneLamtor1 | Authority66508 | Mapping file id66508 NCBI file | EvidenceIEA |
| GeneLamtor2 | Authority83409 | Mapping file id83409 NCBI file | EvidenceIEA |
| GeneLamtor3 | Authority56692 | Mapping file id56692 NCBI file | EvidenceIEA |
| GeneLamtor4 | Authority66096 | Mapping file id66096 NCBI file | EvidenceIEA |
| GeneLamtor5 | Authority68576 | Mapping file id68576 NCBI file | EvidenceIEA |
| GeneLck | Authority16818 | Mapping file id16818 NCBI file | EvidenceIEA |
| GeneMaf1 | Authority68877 | Mapping file id68877 NCBI file | EvidenceIEA |
| GeneMapk1 | Authority26413 | Mapping file id26413 NCBI file | EvidenceIEA |
Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.
- Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.