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Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

GPCR downstream signalling

R-MMU-388396 in Reactome release 97: under Signaling by GPCR, with 593 genes placed in it by the mapping files and 6 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-388396 (human), R-RNO-388396 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 593 genes in this mouse pathway; showing 501 to 593, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 6 of 6
GeneRgs6Authority50779Mapping file id50779 NCBI fileEvidenceIEA
GeneRgs7Authority24012Mapping file id24012 NCBI fileEvidenceIEA
GeneRgs8Authority67792Mapping file id67792 NCBI fileEvidenceIEA
GeneRgs9Authority19739Mapping file id19739 NCBI fileEvidenceIEA
GeneRgsl1Authority240816Mapping file id240816 NCBI fileEvidenceIEA
GeneRhoAuthority212541Mapping file id212541 NCBI fileEvidenceIEA
GeneRhoaAuthority11848Mapping file id11848 NCBI fileEvidenceIEA
GeneRhobAuthority11852Mapping file id11852 NCBI fileEvidenceIEA
GeneRhocAuthority11853Mapping file id11853 NCBI fileEvidenceIEA
GeneRln1Authority19773Mapping file idENSMUSG00000039097 Ensembl fileEvidenceIEA
GeneRln3Authority212108Mapping file id212108 NCBI fileEvidenceIEA
GeneRock1Authority19877Mapping file id19877 NCBI fileEvidenceIEA
GeneRock2Authority19878Mapping file id19878 NCBI fileEvidenceIEA
GeneRps6ka1Authority20111Mapping file id20111 NCBI fileEvidenceIEA
GeneRps6ka2Authority20112Mapping file id20112 NCBI fileEvidenceIEA
GeneRps6ka3Authority110651Mapping file id110651 NCBI fileEvidenceIEA
GeneRrhAuthority20132Mapping file id20132 NCBI fileEvidenceIEA
GeneRxfp1Authority381489Mapping file id381489 NCBI fileEvidenceIEA
GeneRxfp2Authority140498Mapping file id140498 NCBI fileEvidenceIEA
GeneRxfp3Authority239336Mapping file id239336 NCBI fileEvidenceIEA
GeneRxfp4Authority242093Mapping file id242093 NCBI fileEvidenceIEA
GeneS1pr2Authority14739Mapping file id14739 NCBI fileEvidenceIEA
GeneS1pr3Authority13610Mapping file id13610 NCBI fileEvidenceIEA
GeneS1pr4Authority13611Mapping file id13611 NCBI fileEvidenceIEA
GeneS1pr5Authority94226Mapping file id94226 NCBI fileEvidenceIEA
GeneSaxo3Authority100040019Mapping file idENSMUSG00000118462 Ensembl fileEvidenceIEA
GeneSctAuthority20287Mapping file id20287 NCBI fileEvidenceIEA
GeneSctrAuthority319229Mapping file id319229 NCBI fileEvidenceIEA
GeneShc1Authority20416Mapping file id20416 NCBI fileEvidenceIEA
GeneSos1Authority20662Mapping file id20662 NCBI fileEvidenceIEA
GeneSos2Authority20663Mapping file id20663 NCBI fileEvidenceIEA
GeneSrcAuthority20779Mapping file id20779 NCBI fileEvidenceIEA
GeneSstAuthority20604Mapping file id20604 NCBI fileEvidenceIEA
GeneSstr1Authority20605Mapping file id20605 NCBI fileEvidenceIEA
GeneSstr2Authority20606Mapping file id20606 NCBI fileEvidenceIEA
GeneSstr3Authority20607Mapping file id20607 NCBI fileEvidenceIEA
GeneSstr4Authority20608Mapping file id20608 NCBI fileEvidenceIEA
GeneSstr5Authority20609Mapping file id20609 NCBI fileEvidenceIEA
GeneSucnr1Authority84112Mapping file id84112 NCBI fileEvidenceIEA
GeneTaar1Authority111174Mapping file id111174 NCBI fileEvidenceIEA
GeneTaar2Authority209512Mapping file id209512 NCBI fileEvidenceIEA
GeneTaar3Authority493809Mapping file id493809 NCBI fileEvidenceIEA
GeneTaar5Authority215854Mapping file id215854 NCBI fileEvidenceIEA
GeneTaar6Authority215855Mapping file id215855 NCBI fileEvidenceIEA
GeneTaar8bAuthority382348Mapping file id382348 NCBI fileEvidenceIEA
GeneTaar8cAuthority494546Mapping file id494546 NCBI fileEvidenceIEA
GeneTaar9Authority503558Mapping file id503558 NCBI fileEvidenceIEA
GeneTac1Authority21333Mapping file id21333 NCBI fileEvidenceIEA
GeneTac2Authority21334Mapping file id21334 NCBI fileEvidenceIEA
GeneTacr1Authority21336Mapping file id21336 NCBI fileEvidenceIEA
GeneTacr2Authority21337Mapping file id21337 NCBI fileEvidenceIEA
GeneTacr3Authority21338Mapping file id21338 NCBI fileEvidenceIEA
GeneTas1r1Authority110326Mapping file id110326 NCBI fileEvidenceIEA
GeneTas1r2Authority83770Mapping file id83770 NCBI fileEvidenceIEA
GeneTas1r3Authority83771Mapping file id83771 NCBI fileEvidenceIEA
GeneTas2r105Authority57252Mapping file id57252 NCBI fileEvidenceIEA
GeneTas2r107Authority387342Mapping file id387342 NCBI fileEvidenceIEA
GeneTas2r108Authority57253Mapping file id57253 NCBI fileEvidenceIEA
GeneTas2r118Authority387347Mapping file id387347 NCBI fileEvidenceIEA
GeneTas2r119Authority57254Mapping file id57254 NCBI fileEvidenceIEA
GeneTas2r120Authority387348Mapping file id387348 NCBI fileEvidenceIEA
GeneTas2r121Authority387349Mapping file id387349 NCBI fileEvidenceIEA
GeneTas2r126Authority387353Mapping file id387353 NCBI fileEvidenceIEA
GeneTas2r130Authority387355Mapping file id387355 NCBI fileEvidenceIEA
GeneTas2r131Authority387356Mapping file id387356 NCBI fileEvidenceIEA
GeneTas2r135Authority387512Mapping file id387512 NCBI fileEvidenceIEA
GeneTas2r136Authority353165Mapping file id353165 NCBI fileEvidenceIEA
GeneTas2r137Authority574417Mapping file id574417 NCBI fileEvidenceIEA
GeneTas2r138Authority387513Mapping file id387513 NCBI fileEvidenceIEA
GeneTas2r139Authority353148Mapping file id353148 NCBI fileEvidenceIEA
GeneTas2r140Authority387616Mapping file id387616 NCBI fileEvidenceIEA
GeneTas2r144Authority387515Mapping file id387515 NCBI fileEvidenceIEA
GeneTbxa2rAuthority21390Mapping file id21390 NCBI fileEvidenceIEA
GeneTiam2Authority24001Mapping file id24001 NCBI fileEvidenceIEA
GeneTrhAuthority22044Mapping file id22044 NCBI fileEvidenceIEA
GeneTrhrAuthority22045Mapping file id22045 NCBI fileEvidenceIEA
GeneTrioAuthority223435Mapping file id223435 NCBI fileEvidenceIEA
GeneTrpc3Authority22065Mapping file id22065 NCBI fileEvidenceIEA
GeneTrpc6Authority22068Mapping file id22068 NCBI fileEvidenceIEA
GeneTrpc7Authority26946Mapping file id26946 NCBI fileEvidenceIEA
GeneTshbAuthority22094Mapping file idENSMUSG00000027857 Ensembl fileEvidenceIEA
GeneTshrAuthority22095Mapping file id22095 NCBI fileEvidenceIEA
GeneUts2Authority24111Mapping file id24111 NCBI fileEvidenceIEA
GeneUts2bAuthority224065Mapping file id224065 NCBI fileEvidenceIEA
GeneUts2rAuthority217369Mapping file id217369 NCBI fileEvidenceIEA
GeneVav1Authority22324Mapping file id22324 NCBI fileEvidenceIEA
GeneVav2Authority22325Mapping file id22325 NCBI fileEvidenceIEA
GeneVav3Authority57257Mapping file id57257 NCBI fileEvidenceIEA
GeneVipAuthority22353Mapping file id22353 NCBI fileEvidenceIEA
GeneVipr1Authority22354Mapping file id22354 NCBI fileEvidenceIEA
GeneVipr2Authority22355Mapping file id22355 NCBI fileEvidenceIEA
GeneXcl1Authority16963Mapping file id16963 NCBI fileEvidenceIEA
GeneXcr1Authority23832Mapping file id23832 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.