Pathway Mouse Mus musculus
Read this first
Mitochondrial translation elongation
R-MMU-5389840 in Reactome release 97: under Mitochondrial translation, with 86 genes placed in it by the mapping files and 0 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-5389840 (human), R-RNO-5389840 (rat). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists.
[R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments.
[R11]
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this mouse pathway
The mapping files place 86 genes in this mouse pathway; showing 1 to 86, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneAurkaip1 | Authority66077 | Mapping file id66077 NCBI file | EvidenceIEA |
| GeneChchd1 | Authority66121 | Mapping file id66121 NCBI file | EvidenceIEA |
| GeneDap3 | Authority65111 | Mapping file id65111 NCBI file | EvidenceIEA |
| GeneEral1 | Authority57837 | Mapping file id57837 NCBI file | EvidenceIEA |
| GeneGadd45gip1 | Authority102060 | Mapping file id102060 NCBI file | EvidenceIEA |
| GeneGfm1 | Authority28030 | Mapping file id28030 NCBI file | EvidenceIEA |
| GeneKdg4 | Authority66128 | Mapping file id66128 NCBI file | EvidenceIEA |
| GeneMrpl1 | Authority94061 | Mapping file id94061 NCBI file | EvidenceIEA |
| GeneMrpl10 | Authority107732 | Mapping file id107732 NCBI file | EvidenceIEA |
| GeneMrpl11 | Authority66419 | Mapping file id66419 NCBI file | EvidenceIEA |
| GeneMrpl12 | Authority56282 | Mapping file id56282 NCBI file | EvidenceIEA |
| GeneMrpl13 | Authority68537 | Mapping file id68537 NCBI file | EvidenceIEA |
| GeneMrpl14 | Authority68463 | Mapping file id68463 NCBI file | EvidenceIEA |
| GeneMrpl15 | Authority27395 | Mapping file id27395 NCBI file | EvidenceIEA |
| GeneMrpl16 | Authority94063 | Mapping file id94063 NCBI file | EvidenceIEA |
| GeneMrpl17 | Authority27397 | Mapping file id27397 NCBI file | EvidenceIEA |
| GeneMrpl18 | Authority67681 | Mapping file id67681 NCBI file | EvidenceIEA |
| GeneMrpl19 | Authority56284 | Mapping file id56284 NCBI file | EvidenceIEA |
| GeneMrpl2 | Authority27398 | Mapping file id27398 NCBI file | EvidenceIEA |
| GeneMrpl20 | Authority66448 | Mapping file id66448 NCBI file | EvidenceIEA |
| GeneMrpl21 | Authority353242 | Mapping file id353242 NCBI file | EvidenceIEA |
| GeneMrpl22 | Authority216767 | Mapping file id216767 NCBI file | EvidenceIEA |
| GeneMrpl23 | Authority19935 | Mapping file id19935 NCBI file | EvidenceIEA |
| GeneMrpl24 | Authority67707 | Mapping file id67707 NCBI file | EvidenceIEA |
| GeneMrpl27 | Authority94064 | Mapping file id94064 NCBI file | EvidenceIEA |
| GeneMrpl28 | Authority68611 | Mapping file id68611 NCBI file | EvidenceIEA |
| GeneMrpl3 | Authority94062 | Mapping file id94062 NCBI file | EvidenceIEA |
| GeneMrpl30 | Authority107734 | Mapping file id107734 NCBI file | EvidenceIEA |
| GeneMrpl32 | Authority75398 | Mapping file id75398 NCBI file | EvidenceIEA |
| GeneMrpl33 | Authority66845 | Mapping file id66845 NCBI file | EvidenceIEA |
| GeneMrpl34 | Authority94065 | Mapping file id94065 NCBI file | EvidenceIEA |
| GeneMrpl35 | Authority66223 | Mapping file id66223 NCBI file | EvidenceIEA |
| GeneMrpl36 | Authority94066 | Mapping file id94066 NCBI file | EvidenceIEA |
| GeneMrpl37 | Authority56280 | Mapping file id56280 NCBI file | EvidenceIEA |
| GeneMrpl38 | Authority60441 | Mapping file id60441 NCBI file | EvidenceIEA |
| GeneMrpl39 | Authority27393 | Mapping file id27393 NCBI file | EvidenceIEA |
| GeneMrpl4 | Authority66163 | Mapping file id66163 NCBI file | EvidenceIEA |
| GeneMrpl40 | Authority18100 | Mapping file id18100 NCBI file | EvidenceIEA |
| GeneMrpl41 | Authority107733 | Mapping file id107733 NCBI file | EvidenceIEA |
| GeneMrpl42 | Authority67270 | Mapping file id67270 NCBI file | EvidenceIEA |
| GeneMrpl43 | Authority94067 | Mapping file idENSMUSG00000025208 Ensembl file | EvidenceIEA |
| GeneMrpl44 | Authority69163 | Mapping file id69163 NCBI file | EvidenceIEA |
| GeneMrpl45 | Authority67036 | Mapping file id67036 NCBI file | EvidenceIEA |
| GeneMrpl46 | Authority67308 | Mapping file id67308 NCBI file | EvidenceIEA |
| GeneMrpl47 | Authority74600 | Mapping file id74600 NCBI file | EvidenceIEA |
| GeneMrpl48 | Authority52443 | Mapping file id52443 NCBI file | EvidenceIEA |
| GeneMrpl49 | Authority18120 | Mapping file id18120 NCBI file | EvidenceIEA |
| GeneMrpl50 | Authority28028 | Mapping file id28028 NCBI file | EvidenceIEA |
| GeneMrpl51 | Authority66493 | Mapping file id66493 NCBI file | EvidenceIEA |
| GeneMrpl52 | Authority68836 | Mapping file id68836 NCBI file | EvidenceIEA |
| GeneMrpl53 | Authority68499 | Mapping file id68499 NCBI file | EvidenceIEA |
| GeneMrpl54 | Authority66047 | Mapping file id66047 NCBI file | EvidenceIEA |
| GeneMrpl55 | Authority67212 | Mapping file id67212 NCBI file | EvidenceIEA |
| GeneMrpl57 | Authority67840 | Mapping file id67840 NCBI file | EvidenceIEA |
| GeneMrpl58 | Authority68572 | Mapping file id68572 NCBI file | EvidenceIEA |
| GeneMrpl9 | Authority78523 | Mapping file id78523 NCBI file | EvidenceIEA |
| GeneMrps10 | Authority64657 | Mapping file idENSMUSG00000034729 Ensembl file | EvidenceIEA |
| GeneMrps11 | Authority67994 | Mapping file idENSMUSG00000030611 Ensembl file | EvidenceIEA |
| GeneMrps12 | Authority24030 | Mapping file id24030 NCBI file | EvidenceIEA |
| GeneMrps14 | Authority64659 | Mapping file id64659 NCBI file | EvidenceIEA |
| GeneMrps15 | Authority66407 | Mapping file id66407 NCBI file | EvidenceIEA |
| GeneMrps16 | Authority66242 | Mapping file id66242 NCBI file | EvidenceIEA |
| GeneMrps17 | Authority66258 | Mapping file id66258 NCBI file | EvidenceIEA |
| GeneMrps18a | Authority68565 | Mapping file id68565 NCBI file | EvidenceIEA |
| GeneMrps18b | Authority66973 | Mapping file id66973 NCBI file | EvidenceIEA |
| GeneMrps18c | Authority68735 | Mapping file id68735 NCBI file | EvidenceIEA |
| GeneMrps2 | Authority118451 | Mapping file id118451 NCBI file | EvidenceIEA |
| GeneMrps21 | Authority66292 | Mapping file id66292 NCBI file | EvidenceIEA |
| GeneMrps22 | Authority64655 | Mapping file id64655 NCBI file | EvidenceIEA |
| GeneMrps23 | Authority64656 | Mapping file id64656 NCBI file | EvidenceIEA |
| GeneMrps24 | Authority64660 | Mapping file id64660 NCBI file | EvidenceIEA |
| GeneMrps25 | Authority64658 | Mapping file id64658 NCBI file | EvidenceIEA |
| GeneMrps26 | Authority99045 | Mapping file id99045 NCBI file | EvidenceIEA |
| GeneMrps27 | Authority218506 | Mapping file id218506 NCBI file | EvidenceIEA |
| GeneMrps28 | Authority66230 | Mapping file id66230 NCBI file | EvidenceIEA |
| GeneMrps30 | Authority59054 | Mapping file id59054 NCBI file | EvidenceIEA |
| GeneMrps31 | Authority57312 | Mapping file id57312 NCBI file | EvidenceIEA |
| GeneMrps33 | Authority14548 | Mapping file id14548 NCBI file | EvidenceIEA |
| GeneMrps34 | Authority79044 | Mapping file id79044 NCBI file | EvidenceIEA |
| GeneMrps35 | Authority232536 | Mapping file id232536 NCBI file | EvidenceIEA |
| GeneMrps5 | Authority77721 | Mapping file id77721 NCBI file | EvidenceIEA |
| GeneMrps6 | Authority121022 | Mapping file id121022 NCBI file | EvidenceIEA |
| GeneMrps7 | Authority50529 | Mapping file id50529 NCBI file | EvidenceIEA |
| GeneMrps9 | Authority69527 | Mapping file id69527 NCBI file | EvidenceIEA |
| GeneOxa1l | Authority69089 | Mapping file id69089 NCBI file | EvidenceIEA |
| GenePtcd3 | Authority69956 | Mapping file id69956 NCBI file | EvidenceIEA |
Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.
- Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Children
None: no pathway of this release's list names this one as a parent.
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.