Pathway Mouse Mus musculus
Read this first
Signaling by Receptor Tyrosine Kinases
R-MMU-9006934 in Reactome release 97: under Signal Transduction, with 419 genes placed in it by the mapping files and 14 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9006934 (human), R-RNO-9006934 (rat). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists.
[R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments.
[R11]
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this mouse pathway
The mapping files place 419 genes in this mouse pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneAamp | Authority227290 | Mapping file id227290 NCBI file | EvidenceIEA |
| GeneAbi1 | Authority11308 | Mapping file id11308 NCBI file | EvidenceIEA |
| GeneAbi2 | Authority329165 | Mapping file id329165 NCBI file | EvidenceIEA |
| GeneActb | Authority11461 | Mapping file id11461 NCBI file | EvidenceIEA |
| GeneActg1 | Authority11465 | Mapping file id11465 NCBI file | EvidenceIEA |
| GeneAkt1 | Authority11651 | Mapping file id11651 NCBI file | EvidenceIEA |
| GeneAkt2 | Authority11652 | Mapping file id11652 NCBI file | EvidenceIEA |
| GeneAkt3 | Authority23797 | Mapping file id23797 NCBI file | EvidenceIEA |
| GeneAlk | Authority11682 | Mapping file id11682 NCBI file | EvidenceIEA |
| GeneAlkal1 | Authority620393 | Mapping file id620393 NCBI file | EvidenceIEA |
| GeneAlkal2 | Authority100294583 | Mapping file id100294583 NCBI file | EvidenceIEA |
| GeneAp2a1 | Authority11771 | Mapping file id11771 NCBI file | EvidenceIEA |
| GeneAp2a2 | Authority11772 | Mapping file id11772 NCBI file | EvidenceIEA |
| GeneAp2b1 | Authority71770 | Mapping file id71770 NCBI file | EvidenceIEA |
| GeneAp2m1 | Authority11773 | Mapping file id11773 NCBI file | EvidenceIEA |
| GeneAp2s1 | Authority232910 | Mapping file id232910 NCBI file | EvidenceIEA |
| GeneAph1a | Authority226548 | Mapping file id226548 NCBI file | EvidenceIEA |
| GeneAph1b | Authority208117 | Mapping file id208117 NCBI file | EvidenceIEA |
| GeneAreg | Authority11839 | Mapping file id11839 NCBI file | EvidenceIEA |
| GeneArf6 | Authority11845 | Mapping file id11845 NCBI file | EvidenceIEA |
| GeneArhgef7 | Authority54126 | Mapping file id54126 NCBI file | EvidenceIEA |
| GeneAtf1 | Authority11908 | Mapping file id11908 NCBI file | EvidenceIEA |
| GeneAtp6ap1 | Authority54411 | Mapping file id54411 NCBI file | EvidenceIEA |
| GeneAtp6v0a1 | Authority11975 | Mapping file id11975 NCBI file | EvidenceIEA |
| GeneAtp6v0a2 | Authority21871 | Mapping file id21871 NCBI file | EvidenceIEA |
| GeneAtp6v0a4 | Authority140494 | Mapping file id140494 NCBI file | EvidenceIEA |
| GeneAtp6v0b | Authority114143 | Mapping file id114143 NCBI file | EvidenceIEA |
| GeneAtp6v0c | Authority11984 | Mapping file id11984 NCBI file | EvidenceIEA |
| GeneAtp6v0d1 | Authority11972 | Mapping file id11972 NCBI file | EvidenceIEA |
| GeneAtp6v0d2 | Authority242341 | Mapping file id242341 NCBI file | EvidenceIEA |
| GeneAtp6v0e | Authority11974 | Mapping file id11974 NCBI file | EvidenceIEA |
| GeneAtp6v0e2 | Authority76252 | Mapping file id76252 NCBI file | EvidenceIEA |
| GeneAtp6v1a | Authority11964 | Mapping file id11964 NCBI file | EvidenceIEA |
| GeneAtp6v1b1 | Authority110935 | Mapping file id110935 NCBI file | EvidenceIEA |
| GeneAtp6v1b2 | Authority11966 | Mapping file id11966 NCBI file | EvidenceIEA |
| GeneAtp6v1c1 | Authority66335 | Mapping file id66335 NCBI file | EvidenceIEA |
| GeneAtp6v1c2 | Authority68775 | Mapping file id68775 NCBI file | EvidenceIEA |
| GeneAtp6v1d | Authority73834 | Mapping file id73834 NCBI file | EvidenceIEA |
| GeneAtp6v1e1 | Authority11973 | Mapping file id11973 NCBI file | EvidenceIEA |
| GeneAtp6v1e2 | Authority74915 | Mapping file id74915 NCBI file | EvidenceIEA |
| GeneAtp6v1f | Authority66144 | Mapping file id66144 NCBI file | EvidenceIEA |
| GeneAtp6v1g1 | Authority66290 | Mapping file id66290 NCBI file | EvidenceIEA |
| GeneAtp6v1g2 | Authority66237 | Mapping file id66237 NCBI file | EvidenceIEA |
| GeneAtp6v1g3 | Authority338375 | Mapping file id338375 NCBI file | EvidenceIEA |
| GeneAtp6v1h | Authority108664 | Mapping file id108664 NCBI file | EvidenceIEA |
| GeneAxl | Authority26362 | Mapping file id26362 NCBI file | EvidenceIEA |
| GeneBaiap2 | Authority108100 | Mapping file id108100 NCBI file | EvidenceIEA |
| GeneBcar1 | Authority12927 | Mapping file id12927 NCBI file | EvidenceIEA |
| GeneBdnf | Authority12064 | Mapping file id12064 NCBI file | EvidenceIEA |
| GeneBraf | Authority109880 | Mapping file id109880 NCBI file | EvidenceIEA |
| GeneBrk1 | Authority101314 | Mapping file id101314 NCBI file | EvidenceIEA |
| GeneBtc | Authority12223 | Mapping file id12223 NCBI file | EvidenceIEA |
| GeneCalm1 | Authority12313 | Mapping file id12313 NCBI file | EvidenceIEA |
| GeneCalm2 | Authority12314 | Mapping file idENSMUSG00000036438 Ensembl file | EvidenceIEA |
| GeneCalm3 | Authority12315 | Mapping file idENSMUSG00000019370 Ensembl file | EvidenceIEA |
| GeneCav1 | Authority12389 | Mapping file id12389 NCBI file | EvidenceIEA |
| GeneCbl | Authority12402 | Mapping file id12402 NCBI file | EvidenceIEA |
| GeneCdc37 | Authority12539 | Mapping file id12539 NCBI file | EvidenceIEA |
| GeneCdc42 | Authority12540 | Mapping file id12540 NCBI file | EvidenceIEA |
| GeneCdh5 | Authority12562 | Mapping file id12562 NCBI file | EvidenceIEA |
| GeneChd4 | Authority107932 | Mapping file id107932 NCBI file | EvidenceIEA |
| GeneChek1 | Authority12649 | Mapping file id12649 NCBI file | EvidenceIEA |
| GeneCilp | Authority214425 | Mapping file id214425 NCBI file | EvidenceIEA |
| GeneClta | Authority12757 | Mapping file idENSMUSG00000028478 Ensembl file | EvidenceIEA |
| GeneCltc | Authority67300 | Mapping file id67300 NCBI file | EvidenceIEA |
| GeneCma1 | Authority17228 | Mapping file id17228 NCBI file | EvidenceIEA |
| GeneCol11a1 | Authority12814 | Mapping file id12814 NCBI file | EvidenceIEA |
| GeneCol11a2 | Authority12815 | Mapping file id12815 NCBI file | EvidenceIEA |
| GeneCol24a1 | Authority71355 | Mapping file id71355 NCBI file | EvidenceIEA |
| GeneCol27a1 | Authority373864 | Mapping file id373864 NCBI file | EvidenceIEA |
| GeneCol2a1 | Authority12824 | Mapping file id12824 NCBI file | EvidenceIEA |
| GeneCol3a1 | Authority12825 | Mapping file id12825 NCBI file | EvidenceIEA |
| GeneCol4a1 | Authority12826 | Mapping file id12826 NCBI file | EvidenceIEA |
| GeneCol4a2 | Authority12827 | Mapping file id12827 NCBI file | EvidenceIEA |
| GeneCol5a1 | Authority12831 | Mapping file id12831 NCBI file | EvidenceIEA |
| GeneCol5a2 | Authority12832 | Mapping file id12832 NCBI file | EvidenceIEA |
| GeneCol5a3 | Authority53867 | Mapping file id53867 NCBI file | EvidenceIEA |
| GeneCol6a1 | Authority12833 | Mapping file id12833 NCBI file | EvidenceIEA |
| GeneCol6a2 | Authority12834 | Mapping file id12834 NCBI file | EvidenceIEA |
| GeneCol6a3 | Authority12835 | Mapping file idENSMUSG00000048126 Ensembl file | EvidenceIEA |
| GeneCol6a5 | Authority665033 | Mapping file id665033 NCBI file | EvidenceIEA |
| GeneCol6a6 | Authority245026 | Mapping file id245026 NCBI file | EvidenceIEA |
| GeneCol9a1 | Authority12839 | Mapping file id12839 NCBI file | EvidenceIEA |
| GeneCol9a2 | Authority12840 | Mapping file idENSMUSG00000028626 Ensembl file | EvidenceIEA |
| GeneCol9a3 | Authority12841 | Mapping file id12841 NCBI file | EvidenceIEA |
| GeneCreb1 | Authority12912 | Mapping file id12912 NCBI file | EvidenceIEA |
| GeneCrk | Authority12928 | Mapping file id12928 NCBI file | EvidenceIEA |
| GeneCrkl | Authority12929 | Mapping file id12929 NCBI file | EvidenceIEA |
| GeneCsk | Authority12988 | Mapping file id12988 NCBI file | EvidenceIEA |
| GeneCtnna1 | Authority12385 | Mapping file id12385 NCBI file | EvidenceIEA |
| GeneCtnnb1 | Authority12387 | Mapping file id12387 NCBI file | EvidenceIEA |
| GeneCtnnd1 | Authority12388 | Mapping file id12388 NCBI file | EvidenceIEA |
| GeneCtsd | Authority13033 | Mapping file id13033 NCBI file | EvidenceIEA |
| GeneCul5 | Authority75717 | Mapping file id75717 NCBI file | EvidenceIEA |
| GeneCyba | Authority13057 | Mapping file id13057 NCBI file | EvidenceIEA |
| GeneCybb | Authority13058 | Mapping file id13058 NCBI file | EvidenceIEA |
| GeneCyfip1 | Authority20430 | Mapping file id20430 NCBI file | EvidenceIEA |
| GeneCyfip2 | Authority76884 | Mapping file id76884 NCBI file | EvidenceIEA |
| GeneDiaph1 | Authority13367 | Mapping file id13367 NCBI file | EvidenceIEA |
| GeneDnal4 | Authority54152 | Mapping file id54152 NCBI file | EvidenceIEA |
Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.
- Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Children
- Signaling by ALKR-MMU-20155620 genes
- Signaling by EGFRR-MMU-17792950 genes
- Signaling by ERBB2R-MMU-122798647 genes
- Signaling by ERBB4R-MMU-123639435 genes
- Signaling by FGFRR-MMU-19023678 genes
- Signaling by Insulin receptorR-MMU-7475279 genes
- Signaling by LTKR-MMU-984266312 genes
- Signaling by METR-MMU-680683468 genes
- Signaling by MST1R-MMU-88524055 genes
- Signaling by NTRKsR-MMU-16652076 genes
- Signaling by PDGFR-MMU-18679753 genes
- Signaling by SCF-KITR-MMU-143355738 genes
- Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)R-MMU-240419250 genes
- Signaling by VEGFR-MMU-194138101 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.