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Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by Receptor Tyrosine Kinases

R-RNO-9006934 in Reactome release 97: under Signal Transduction, with 409 genes placed in it by the mapping files and 14 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9006934 (human), R-MMU-9006934 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 409 genes in this rat pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 5
GeneAampAuthority301512Mapping file id301512 NCBI fileEvidenceIEA
GeneAbi1Authority79249Mapping file id79249 NCBI fileEvidenceIEA
GeneAbi2Authority286928Mapping file id286928 NCBI fileEvidenceIEA
GeneActbAuthority81822Mapping file id81822 NCBI fileEvidenceIEA
GeneActg1Authority287876Mapping file id287876 NCBI fileEvidenceIEA
GeneAkt1Authority24185Mapping file id24185 NCBI fileEvidenceIEA
GeneAkt2Authority25233Mapping file id25233 NCBI fileEvidenceIEA
GeneAkt3Authority29414Mapping file id29414 NCBI fileEvidenceIEA
GeneAlkAuthority266802Mapping file id266802 NCBI fileEvidenceIEA
GeneAlkal1Authority100910984Mapping file id100910984 NCBI fileEvidenceIEA
GeneAlkal2Authority679566Mapping file id679566 NCBI fileEvidenceIEA
GeneAp2a1Authority308578Mapping file idENSRNOG00000026243 Ensembl fileEvidenceIEA
GeneAp2b1Authority140670Mapping file id140670 NCBI fileEvidenceIEA
GeneAp2m1Authority116563Mapping file id116563 NCBI fileEvidenceIEA
GeneAp2s1Authority65046Mapping file id65046 NCBI fileEvidenceIEA
GeneAph1aAuthority365872Mapping file idENSRNOG00000023816 Ensembl fileEvidenceIEA
GeneAph1bAuthority300802Mapping file id300802 NCBI fileEvidenceIEA
GeneAregAuthority29183Mapping file id29183 NCBI fileEvidenceIEA
GeneArf6Authority79121Mapping file id79121 NCBI fileEvidenceIEA
GeneArhgef7Authority114559Mapping file id114559 NCBI fileEvidenceIEA
GeneAtf1Authority315305Mapping file id315305 NCBI fileEvidenceIEA
GeneAtp6ap1Authority83615Mapping file id83615 NCBI fileEvidenceIEA
GeneAtp6v0a1Authority29757Mapping file id29757 NCBI fileEvidenceIEA
GeneAtp6v0a4Authority296981Mapping file id296981 NCBI fileEvidenceIEA
GeneAtp6v0bAuthority298451Mapping file id298451 NCBI fileEvidenceIEA
GeneAtp6v0cAuthority170667Mapping file id170667 NCBI fileEvidenceIEA
GeneAtp6v0d1Authority291969Mapping file idENSRNOG00000017235 Ensembl fileEvidenceIEA
GeneAtp6v0d2Authority297932Mapping file id297932 NCBI fileEvidenceIEA
GeneAtp6v0e1Authority94170Mapping file id94170 NCBI fileEvidenceIEA
GeneAtp6v0e2Authority436582Mapping file id436582 NCBI fileEvidenceIEA
GeneAtp6v1aAuthority685232Mapping file idENSRNOG00000001992 Ensembl fileEvidenceIEA
GeneAtp6v1b1Authority312488Mapping file id312488 NCBI fileEvidenceIEA
GeneAtp6v1b2Authority117596Mapping file id117596 NCBI fileEvidenceIEA
GeneAtp6v1c1Authority299971Mapping file id299971 NCBI fileEvidenceIEA
GeneAtp6v1c2Authority362802Mapping file id362802 NCBI fileEvidenceIEA
GeneAtp6v1dAuthority299159Mapping file idENSRNOG00000009080 Ensembl fileEvidenceIEA
GeneAtp6v1e1Authority297566Mapping file id297566 NCBI fileEvidenceIEA
GeneAtp6v1e2Authority366545Mapping file id366545 NCBI fileEvidenceIEA
GeneAtp6v1fAuthority116664Mapping file id116664 NCBI fileEvidenceIEA
GeneAtp6v1g1Authority298103Mapping file id298103 NCBI fileEvidenceIEA
GeneAtp6v1g2Authority368044Mapping file id368044 NCBI fileEvidenceIEA
GeneAtp6v1g3Authority289407Mapping file id289407 NCBI fileEvidenceIEA
GeneAtp6v1hAuthority297797Mapping file idENSRNOG00000030862 Ensembl fileEvidenceIEA
GeneAxlAuthority308444Mapping file idENSRNOG00000020716 Ensembl fileEvidenceIEA
GeneBaiap2Authority117542Mapping file id117542 NCBI fileEvidenceIEA
GeneBcar1Authority25414Mapping file id25414 NCBI fileEvidenceIEA
GeneBdnfAuthority24225Mapping file id24225 NCBI fileEvidenceIEA
GeneBrafAuthority114486Mapping file id114486 NCBI fileEvidenceIEA
GeneBrk1Authority679934Mapping file id679934 NCBI fileEvidenceIEA
GeneBtcAuthority64022Mapping file id64022 NCBI fileEvidenceIEA
GeneCa14Authority791259Mapping file idENSRNOG00000023162 Ensembl fileEvidenceIEA
GeneCalm1Authority24242Mapping file idENSRNOG00000072513 Ensembl fileEvidenceIEA
GeneCalm2Authority50663Mapping file idENSRNOG00000067086 Ensembl fileEvidenceIEA
GeneCalm3Authority24244Mapping file id24244 NCBI fileEvidenceIEA
GeneCblAuthority500985Mapping file id500985 NCBI fileEvidenceIEA
GeneCdc37Authority114562Mapping file id114562 NCBI fileEvidenceIEA
GeneCdc42Authority64465Mapping file id64465 NCBI fileEvidenceIEA
GeneCdh5Authority307618Mapping file idENSRNOG00000013324 Ensembl fileEvidenceIEA
GeneChd4Authority117535Mapping file id117535 NCBI fileEvidenceIEA
GeneChek1Authority140583Mapping file id140583 NCBI fileEvidenceIEA
GeneCilpAuthority315761Mapping file id315761 NCBI fileEvidenceIEA
GeneCltaAuthority83800Mapping file id83800 NCBI fileEvidenceIEA
GeneCltcAuthority54241Mapping file id54241 NCBI fileEvidenceIEA
GeneCma1Authority25627Mapping file id25627 NCBI fileEvidenceIEA
GeneCol11a1Authority25654Mapping file id25654 NCBI fileEvidenceIEA
GeneCol11a2Authority294279Mapping file id294279 NCBI fileEvidenceIEA
GeneCol24a1Authority499723Mapping file idENSRNOG00000014143 Ensembl fileEvidenceIEA
GeneCol27a1Authority298101Mapping file idENSRNOG00000007657 Ensembl fileEvidenceIEA
GeneCol2a1Authority25412Mapping file id25412 NCBI fileEvidenceIEA
GeneCol3a1Authority84032Mapping file id84032 NCBI fileEvidenceIEA
GeneCol4a1Authority290905Mapping file id290905 NCBI fileEvidenceIEA
GeneCol4a2Authority306628Mapping file id306628 NCBI fileEvidenceIEA
GeneCol5a1Authority85490Mapping file id85490 NCBI fileEvidenceIEA
GeneCol5a2Authority85250Mapping file idENSRNOG00000003736 Ensembl fileEvidenceIEA
GeneCol5a3Authority60379Mapping file id60379 NCBI fileEvidenceIEA
GeneCreb1Authority81646Mapping file id81646 NCBI fileEvidenceIEA
GeneCrkAuthority54245Mapping file id54245 NCBI fileEvidenceIEA
GeneCrklAuthority287942Mapping file id287942 NCBI fileEvidenceIEA
GeneCskAuthority315707Mapping file id315707 NCBI fileEvidenceIEA
GeneCtnna1Authority307505Mapping file idENSRNOG00000005796 Ensembl fileEvidenceIEA
GeneCtnnb1Authority84353Mapping file id84353 NCBI fileEvidenceIEA
GeneCtnnd1Authority311163Mapping file id311163 NCBI fileEvidenceIEA
GeneCtsdAuthority171293Mapping file idENSRNOG00000020206 Ensembl fileEvidenceIEA
GeneCul5Authority64624Mapping file id64624 NCBI fileEvidenceIEA
GeneCybaAuthority79129Mapping file id79129 NCBI fileEvidenceIEA
GeneCybbAuthority66021Mapping file id66021 NCBI fileEvidenceIEA
GeneCyfip1Authority308666Mapping file id308666 NCBI fileEvidenceIEA
GeneCyfip2Authority303073Mapping file idENSRNOG00000006557 Ensembl fileEvidenceIEA
GeneDiaph1Authority307483Mapping file idENSRNOG00000019688 Ensembl fileEvidenceIEA
GeneDnal4Authority300078Mapping file id300078 NCBI fileEvidenceIEA
GeneDnal4-ps1Authority294376Mapping file idENSRNOG00000067902 Ensembl fileEvidenceIEA
GeneDock3Authority315992Mapping file id315992 NCBI fileEvidenceIEA
GeneDock7Authority313388Mapping file id313388 NCBI fileEvidenceIEA
GeneDusp3Authority498003Mapping file idENSRNOG00000036798 Ensembl fileEvidenceIEA
GeneDusp4Authority60587Mapping file id60587 NCBI fileEvidenceIEA
GeneDusp6Authority116663Mapping file id116663 NCBI fileEvidenceIEA
GeneDusp7Authority300980Mapping file id300980 NCBI fileEvidenceIEA
GeneEgfAuthority25313Mapping file id25313 NCBI fileEvidenceIEA
GeneEgfrAuthority24329Mapping file id24329 NCBI fileEvidenceIEA
GeneEgr2Authority114090Mapping file id114090 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.