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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Peptide hormone metabolism

R-RNO-2980736 in Reactome release 97: under Metabolism of proteins, with 62 genes placed in it by the mapping files and 5 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-2980736 (human), R-MMU-2980736 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 62 genes in this rat pathway; showing 1 to 62, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 1
GeneAceAuthority24310Mapping file id24310 NCBI fileEvidenceIEA
GeneAce2Authority302668Mapping file id302668 NCBI fileEvidenceIEA
GeneAgtAuthority24179Mapping file id24179 NCBI fileEvidenceIEA
GeneAhrrAuthority498999Mapping file idENSRNOG00000014721 Ensembl fileEvidenceIEA
GeneAtp6ap2Authority302526Mapping file id302526 NCBI fileEvidenceIEA
GeneBcheAuthority65036Mapping file idENSRNOG00000009826 Ensembl fileEvidenceIEA
GeneCes1dAuthority113902Mapping file id113902 NCBI fileEvidenceIEA
GeneCes1dl1Authority291863Mapping file idENSRNOG00000015519 Ensembl fileEvidenceIEA
GeneCgaAuthority116700Mapping file id116700 NCBI fileEvidenceIEA
GeneCma1Authority25627Mapping file id25627 NCBI fileEvidenceIEA
GeneCpa3Authority54242Mapping file id54242 NCBI fileEvidenceIEA
GeneCpb1Authority24271Mapping file idENSRNOG00000030904 Ensembl fileEvidenceIEA
GeneCpb2Authority113936Mapping file id113936 NCBI fileEvidenceIEA
GeneCtsdAuthority171293Mapping file idENSRNOG00000020206 Ensembl fileEvidenceIEA
GeneCtsgAuthority290257Mapping file id290257 NCBI fileEvidenceIEA
GeneCtszAuthority252929Mapping file id252929 NCBI fileEvidenceIEA
GeneDpp4Authority25253Mapping file id25253 NCBI fileEvidenceIEA
GeneEnpepAuthority64017Mapping file id64017 NCBI fileEvidenceIEA
GeneEro1bAuthority364755Mapping file idENSRNOG00000002609 Ensembl fileEvidenceIEA
GeneExoc1Authority305287Mapping file id305287 NCBI fileEvidenceIEA
GeneExoc2Authority171455Mapping file id171455 NCBI fileEvidenceIEA
GeneExoc3Authority252881Mapping file id252881 NCBI fileEvidenceIEA
GeneExoc4Authority116654Mapping file id116654 NCBI fileEvidenceIEA
GeneExoc5Authority60627Mapping file id60627 NCBI fileEvidenceIEA
GeneExoc6Authority50556Mapping file id50556 NCBI fileEvidenceIEA
GeneExoc7Authority64632Mapping file id64632 NCBI fileEvidenceIEA
GeneExoc8Authority245709Mapping file id245709 NCBI fileEvidenceIEA
GeneFfar1Authority266607Mapping file id266607 NCBI fileEvidenceIEA
GeneFfar4Authority294075Mapping file id294075 NCBI fileEvidenceIEA
GeneFshbAuthority25447Mapping file id25447 NCBI fileEvidenceIEA
GeneGh1Authority24391Mapping file id24391 NCBI fileEvidenceIEA
GeneGhrlAuthority59301Mapping file id59301 NCBI fileEvidenceIEA
GeneGipAuthority25040Mapping file id25040 NCBI fileEvidenceIEA
GeneGpr119Authority302813Mapping file id302813 NCBI fileEvidenceIEA
GeneGrpAuthority171101Mapping file id171101 NCBI fileEvidenceIEA
GeneGzmfAuthority266704Mapping file id266704 NCBI fileEvidenceIEA
GeneIgf1Authority24482Mapping file id24482 NCBI fileEvidenceIEA
GeneInhaAuthority24504Mapping file id24504 NCBI fileEvidenceIEA
GeneInhbaAuthority29200Mapping file id29200 NCBI fileEvidenceIEA
GeneInhbbAuthority25196Mapping file id25196 NCBI fileEvidenceIEA
GeneInhbcAuthority64549Mapping file id64549 NCBI fileEvidenceIEA
GeneInhbeAuthority83711Mapping file id83711 NCBI fileEvidenceIEA
GeneIns1Authority24505Mapping file id24505 NCBI fileEvidenceIEA
GeneIns2Authority24506Mapping file id24506 NCBI fileEvidenceIEA
GeneLepAuthority25608Mapping file id25608 NCBI fileEvidenceIEA
GeneLhbAuthority25329Mapping file id25329 NCBI fileEvidenceIEA
GeneLOC148000960Authority148000960Mapping file idENSRNOG00000071307 Ensembl fileEvidenceIEA
GeneMboat4Authority306515Mapping file id306515 NCBI fileEvidenceIEA
GeneMmeAuthority24590Mapping file id24590 NCBI fileEvidenceIEA
GeneP4hbAuthority25506Mapping file id25506 NCBI fileEvidenceIEA
GenePcsk1Authority25204Mapping file id25204 NCBI fileEvidenceIEA
GenePla2g7Authority301265Mapping file id301265 NCBI fileEvidenceIEA
GenePomcAuthority24664Mapping file idENSRNOG00000012686 Ensembl fileEvidenceIEA
GeneRenAuthority24715Mapping file id24715 NCBI fileEvidenceIEA
GeneSaxo3Authority134483105Mapping file idENSRNOG00000047040 Ensembl fileEvidenceIEA
GeneSec11aAuthority65166Mapping file idENSRNOG00000011029 Ensembl fileEvidenceIEA
GeneSec11cAuthority266758Mapping file id266758 NCBI fileEvidenceIEA
GeneSlc30a5Authority294698Mapping file id294698 NCBI fileEvidenceIEA
GeneSlc30a8Authority299903Mapping file id299903 NCBI fileEvidenceIEA
GeneSpcs2Authority293142Mapping file id293142 NCBI fileEvidenceIEA
GeneSpcs3Authority680782Mapping file idENSRNOG00000038933 Ensembl fileEvidenceIEA
GeneTshbAuthority25653Mapping file id25653 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.