Pathway Mouse Mus musculus
Read this first
Peptide hormone metabolism
R-MMU-2980736 in Reactome release 97: under Metabolism of proteins, with 62 genes placed in it by the mapping files and 5 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-2980736 (human), R-RNO-2980736 (rat). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists.
[R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments.
[R11]
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this mouse pathway
The mapping files place 62 genes in this mouse pathway; showing 1 to 62, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneAce | Authority11421 | Mapping file id11421 NCBI file | EvidenceIEA |
| GeneAce2 | Authority70008 | Mapping file id70008 NCBI file | EvidenceIEA |
| GeneAtp6ap2 | Authority70495 | Mapping file id70495 NCBI file | EvidenceIEA |
| GeneBche | Authority12038 | Mapping file id12038 NCBI file | EvidenceIEA |
| GeneCes1d | Authority104158 | Mapping file id104158 NCBI file | EvidenceIEA |
| GeneCga | Authority12640 | Mapping file id12640 NCBI file | EvidenceIEA |
| GeneCma1 | Authority17228 | Mapping file id17228 NCBI file | EvidenceIEA |
| GeneCpa3 | Authority12873 | Mapping file id12873 NCBI file | EvidenceIEA |
| GeneCpb1 | Authority76703 | Mapping file id76703 NCBI file | EvidenceIEA |
| GeneCpb2 | Authority56373 | Mapping file id56373 NCBI file | EvidenceIEA |
| GeneCtsd | Authority13033 | Mapping file id13033 NCBI file | EvidenceIEA |
| GeneCtsg | Authority13035 | Mapping file id13035 NCBI file | EvidenceIEA |
| GeneCtsz | Authority64138 | Mapping file id64138 NCBI file | EvidenceIEA |
| GeneDpp4 | Authority13482 | Mapping file id13482 NCBI file | EvidenceIEA |
| GeneEnpep | Authority13809 | Mapping file id13809 NCBI file | EvidenceIEA |
| GeneEro1b | Authority67475 | Mapping file id67475 NCBI file | EvidenceIEA |
| GeneExoc1 | Authority69940 | Mapping file id69940 NCBI file | EvidenceIEA |
| GeneExoc2 | Authority66482 | Mapping file id66482 NCBI file | EvidenceIEA |
| GeneExoc3 | Authority211446 | Mapping file id211446 NCBI file | EvidenceIEA |
| GeneExoc4 | Authority20336 | Mapping file id20336 NCBI file | EvidenceIEA |
| GeneExoc5 | Authority105504 | Mapping file id105504 NCBI file | EvidenceIEA |
| GeneExoc7 | Authority53413 | Mapping file id53413 NCBI file | EvidenceIEA |
| GeneExoc8 | Authority102058 | Mapping file id102058 NCBI file | EvidenceIEA |
| GeneFfar1 | Authority233081 | Mapping file id233081 NCBI file | EvidenceIEA |
| GeneFfar4 | Authority107221 | Mapping file id107221 NCBI file | EvidenceIEA |
| GeneFshb | Authority14308 | Mapping file id14308 NCBI file | EvidenceIEA |
| GeneGcg | Authority14526 | Mapping file id14526 NCBI file | EvidenceIEA |
| GeneGh | Authority14599 | Mapping file id14599 NCBI file | EvidenceIEA |
| GeneGhrl | Authority58991 | Mapping file id58991 NCBI file | EvidenceIEA |
| GeneGip | Authority14607 | Mapping file id14607 NCBI file | EvidenceIEA |
| GeneGnat3 | Authority242851 | Mapping file id242851 NCBI file | EvidenceIEA |
| GeneGnb1 | Authority14688 | Mapping file id14688 NCBI file | EvidenceIEA |
| GeneGnb3 | Authority14695 | Mapping file id14695 NCBI file | EvidenceIEA |
| GeneGng13 | Authority64337 | Mapping file id64337 NCBI file | EvidenceIEA |
| GeneGpr119 | Authority236781 | Mapping file id236781 NCBI file | EvidenceIEA |
| GeneGrp | Authority225642 | Mapping file id225642 NCBI file | EvidenceIEA |
| GeneGzmn | Authority245839 | Mapping file id245839 NCBI file | EvidenceIEA |
| GeneIgf1 | Authority16000 | Mapping file id16000 NCBI file | EvidenceIEA |
| GeneInha | Authority16322 | Mapping file id16322 NCBI file | EvidenceIEA |
| GeneInhba | Authority16323 | Mapping file id16323 NCBI file | EvidenceIEA |
| GeneInhbb | Authority16324 | Mapping file id16324 NCBI file | EvidenceIEA |
| GeneInhbc | Authority16325 | Mapping file id16325 NCBI file | EvidenceIEA |
| GeneInhbe | Authority16326 | Mapping file id16326 NCBI file | EvidenceIEA |
| GeneIns1 | Authority16333 | Mapping file id16333 NCBI file | EvidenceIEA |
| GeneIns2 | Authority16334 | Mapping file id16334 NCBI file | EvidenceIEA |
| GeneLep | Authority16846 | Mapping file id16846 NCBI file | EvidenceIEA |
| GeneMboat4 | Authority234155 | Mapping file id234155 NCBI file | EvidenceIEA |
| GeneMme | Authority17380 | Mapping file id17380 NCBI file | EvidenceIEA |
| GeneP4hb | Authority18453 | Mapping file id18453 NCBI file | EvidenceIEA |
| GenePcsk1 | Authority18548 | Mapping file id18548 NCBI file | EvidenceIEA |
| GenePla2g7 | Authority27226 | Mapping file id27226 NCBI file | EvidenceIEA |
| GenePomc | Authority18976 | Mapping file id18976 NCBI file | EvidenceIEA |
| GeneRen1 | Authority19701 | Mapping file id19701 NCBI file | EvidenceIEA |
| GeneSaxo3 | Authority100040019 | Mapping file idENSMUSG00000118462 Ensembl file | EvidenceIEA |
| GeneSec11a | Authority56529 | Mapping file id56529 NCBI file | EvidenceIEA |
| GeneSec11c | Authority66286 | Mapping file id66286 NCBI file | EvidenceIEA |
| GeneSlc30a5 | Authority69048 | Mapping file id69048 NCBI file | EvidenceIEA |
| GeneSlc30a8 | Authority239436 | Mapping file id239436 NCBI file | EvidenceIEA |
| GeneSpcs1 | Authority69019 | Mapping file id69019 NCBI file | EvidenceIEA |
| GeneSpcs2 | Authority66624 | Mapping file id66624 NCBI file | EvidenceIEA |
| GeneSpcs3 | Authority76687 | Mapping file id76687 NCBI file | EvidenceIEA |
| GeneTshb | Authority22094 | Mapping file idENSMUSG00000027857 Ensembl file | EvidenceIEA |
Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.
- Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.