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Pathway Mouse Mus musculus

Read this first

Every mouse pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Peptide hormone metabolism

R-MMU-2980736 in Reactome release 97: under Metabolism of proteins, with 62 genes placed in it by the mapping files and 5 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-2980736 (human), R-RNO-2980736 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every mouse pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this mouse pathway

The mapping files place 62 genes in this mouse pathway; showing 1 to 62, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this mouse pathway, page 1 of 1
GeneAceAuthority11421Mapping file id11421 NCBI fileEvidenceIEA
GeneAce2Authority70008Mapping file id70008 NCBI fileEvidenceIEA
GeneAtp6ap2Authority70495Mapping file id70495 NCBI fileEvidenceIEA
GeneBcheAuthority12038Mapping file id12038 NCBI fileEvidenceIEA
GeneCes1dAuthority104158Mapping file id104158 NCBI fileEvidenceIEA
GeneCgaAuthority12640Mapping file id12640 NCBI fileEvidenceIEA
GeneCma1Authority17228Mapping file id17228 NCBI fileEvidenceIEA
GeneCpa3Authority12873Mapping file id12873 NCBI fileEvidenceIEA
GeneCpb1Authority76703Mapping file id76703 NCBI fileEvidenceIEA
GeneCpb2Authority56373Mapping file id56373 NCBI fileEvidenceIEA
GeneCtsdAuthority13033Mapping file id13033 NCBI fileEvidenceIEA
GeneCtsgAuthority13035Mapping file id13035 NCBI fileEvidenceIEA
GeneCtszAuthority64138Mapping file id64138 NCBI fileEvidenceIEA
GeneDpp4Authority13482Mapping file id13482 NCBI fileEvidenceIEA
GeneEnpepAuthority13809Mapping file id13809 NCBI fileEvidenceIEA
GeneEro1bAuthority67475Mapping file id67475 NCBI fileEvidenceIEA
GeneExoc1Authority69940Mapping file id69940 NCBI fileEvidenceIEA
GeneExoc2Authority66482Mapping file id66482 NCBI fileEvidenceIEA
GeneExoc3Authority211446Mapping file id211446 NCBI fileEvidenceIEA
GeneExoc4Authority20336Mapping file id20336 NCBI fileEvidenceIEA
GeneExoc5Authority105504Mapping file id105504 NCBI fileEvidenceIEA
GeneExoc7Authority53413Mapping file id53413 NCBI fileEvidenceIEA
GeneExoc8Authority102058Mapping file id102058 NCBI fileEvidenceIEA
GeneFfar1Authority233081Mapping file id233081 NCBI fileEvidenceIEA
GeneFfar4Authority107221Mapping file id107221 NCBI fileEvidenceIEA
GeneFshbAuthority14308Mapping file id14308 NCBI fileEvidenceIEA
GeneGcgAuthority14526Mapping file id14526 NCBI fileEvidenceIEA
GeneGhAuthority14599Mapping file id14599 NCBI fileEvidenceIEA
GeneGhrlAuthority58991Mapping file id58991 NCBI fileEvidenceIEA
GeneGipAuthority14607Mapping file id14607 NCBI fileEvidenceIEA
GeneGnat3Authority242851Mapping file id242851 NCBI fileEvidenceIEA
GeneGnb1Authority14688Mapping file id14688 NCBI fileEvidenceIEA
GeneGnb3Authority14695Mapping file id14695 NCBI fileEvidenceIEA
GeneGng13Authority64337Mapping file id64337 NCBI fileEvidenceIEA
GeneGpr119Authority236781Mapping file id236781 NCBI fileEvidenceIEA
GeneGrpAuthority225642Mapping file id225642 NCBI fileEvidenceIEA
GeneGzmnAuthority245839Mapping file id245839 NCBI fileEvidenceIEA
GeneIgf1Authority16000Mapping file id16000 NCBI fileEvidenceIEA
GeneInhaAuthority16322Mapping file id16322 NCBI fileEvidenceIEA
GeneInhbaAuthority16323Mapping file id16323 NCBI fileEvidenceIEA
GeneInhbbAuthority16324Mapping file id16324 NCBI fileEvidenceIEA
GeneInhbcAuthority16325Mapping file id16325 NCBI fileEvidenceIEA
GeneInhbeAuthority16326Mapping file id16326 NCBI fileEvidenceIEA
GeneIns1Authority16333Mapping file id16333 NCBI fileEvidenceIEA
GeneIns2Authority16334Mapping file id16334 NCBI fileEvidenceIEA
GeneLepAuthority16846Mapping file id16846 NCBI fileEvidenceIEA
GeneMboat4Authority234155Mapping file id234155 NCBI fileEvidenceIEA
GeneMmeAuthority17380Mapping file id17380 NCBI fileEvidenceIEA
GeneP4hbAuthority18453Mapping file id18453 NCBI fileEvidenceIEA
GenePcsk1Authority18548Mapping file id18548 NCBI fileEvidenceIEA
GenePla2g7Authority27226Mapping file id27226 NCBI fileEvidenceIEA
GenePomcAuthority18976Mapping file id18976 NCBI fileEvidenceIEA
GeneRen1Authority19701Mapping file id19701 NCBI fileEvidenceIEA
GeneSaxo3Authority100040019Mapping file idENSMUSG00000118462 Ensembl fileEvidenceIEA
GeneSec11aAuthority56529Mapping file id56529 NCBI fileEvidenceIEA
GeneSec11cAuthority66286Mapping file id66286 NCBI fileEvidenceIEA
GeneSlc30a5Authority69048Mapping file id69048 NCBI fileEvidenceIEA
GeneSlc30a8Authority239436Mapping file id239436 NCBI fileEvidenceIEA
GeneSpcs1Authority69019Mapping file id69019 NCBI fileEvidenceIEA
GeneSpcs2Authority66624Mapping file id66624 NCBI fileEvidenceIEA
GeneSpcs3Authority76687Mapping file id76687 NCBI fileEvidenceIEA
GeneTshbAuthority22094Mapping file idENSMUSG00000027857 Ensembl fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 87,729 mouse pairs both place.

  • Reactome mapping files, the mouse rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the mouse pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.