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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Platelet homeostasis

R-RNO-418346 in Reactome release 97: under Hemostasis, with 58 genes placed in it by the mapping files and 4 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-418346 (human), R-MMU-418346 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 58 genes in this rat pathway; showing 1 to 58, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 1
GeneAdam22Authority57033Mapping file idENSRNOG00000042478 Ensembl fileEvidenceIEA
GeneApobAuthority54225Mapping file id54225 NCBI fileEvidenceIEA
GeneAtp2a1Authority116601Mapping file id116601 NCBI fileEvidenceIEA
GeneAtp2a2Authority29693Mapping file id29693 NCBI fileEvidenceIEA
GeneAtp2a3Authority25391Mapping file id25391 NCBI fileEvidenceIEA
GeneAtp2b1Authority29598Mapping file id29598 NCBI fileEvidenceIEA
GeneAtp2b2Authority24215Mapping file id24215 NCBI fileEvidenceIEA
GeneAtp2b3Authority29599Mapping file id29599 NCBI fileEvidenceIEA
GeneAtp2b4Authority29600Mapping file id29600 NCBI fileEvidenceIEA
GeneCalm1Authority24242Mapping file idENSRNOG00000072513 Ensembl fileEvidenceIEA
GeneCalm2Authority50663Mapping file idENSRNOG00000067086 Ensembl fileEvidenceIEA
GeneCalm3Authority24244Mapping file id24244 NCBI fileEvidenceIEA
GeneFgrAuthority79113Mapping file id79113 NCBI fileEvidenceIEA
GeneIrag1Authority308899Mapping file id308899 NCBI fileEvidenceIEA
GeneItpr1Authority25262Mapping file id25262 NCBI fileEvidenceIEA
GeneItpr2Authority81678Mapping file id81678 NCBI fileEvidenceIEA
GeneItpr3Authority25679Mapping file id25679 NCBI fileEvidenceIEA
GeneLrp8Authority362558Mapping file id362558 NCBI fileEvidenceIEA
GeneNos1Authority24598Mapping file id24598 NCBI fileEvidenceIEA
GeneNos2Authority24599Mapping file id24599 NCBI fileEvidenceIEA
GeneNos3Authority24600Mapping file id24600 NCBI fileEvidenceIEA
GeneP2rx1Authority25505Mapping file id25505 NCBI fileEvidenceIEA
GeneP2rx2Authority114115Mapping file id114115 NCBI fileEvidenceIEA
GeneP2rx3Authority81739Mapping file id81739 NCBI fileEvidenceIEA
GeneP2rx4Authority29659Mapping file id29659 NCBI fileEvidenceIEA
GeneP2rx5Authority113995Mapping file id113995 NCBI fileEvidenceIEA
GeneP2rx6Authority25041Mapping file id25041 NCBI fileEvidenceIEA
GeneP2rx7Authority29665Mapping file id29665 NCBI fileEvidenceIEA
GenePafah2Authority313611Mapping file id313611 NCBI fileEvidenceIEA
GenePde10aAuthority63885Mapping file id63885 NCBI fileEvidenceIEA
GenePde11aAuthority140928Mapping file id140928 NCBI fileEvidenceIEA
GenePde1aAuthority81529Mapping file idENSRNOG00000054212 Ensembl fileEvidenceIEA
GenePde1bAuthority29691Mapping file id29691 NCBI fileEvidenceIEA
GenePde2aAuthority81743Mapping file id81743 NCBI fileEvidenceIEA
GenePde5aAuthority171115Mapping file id171115 NCBI fileEvidenceIEA
GenePde9aAuthority191569Mapping file id191569 NCBI fileEvidenceIEA
GenePecam1Authority29583Mapping file id29583 NCBI fileEvidenceIEA
GenePla2g4aAuthority24653Mapping file idENSRNOG00000002657 Ensembl fileEvidenceIEA
GenePpp2caAuthority24672Mapping file id24672 NCBI fileEvidenceIEA
GenePpp2cbAuthority24673Mapping file id24673 NCBI fileEvidenceIEA
GenePpp2r1aAuthority117281Mapping file id117281 NCBI fileEvidenceIEA
GenePpp2r1bAuthority315648Mapping file id315648 NCBI fileEvidenceIEA
GenePpp2r5aAuthority312754Mapping file id312754 NCBI fileEvidenceIEA
GenePpp2r5bAuthority309179Mapping file id309179 NCBI fileEvidenceIEA
GenePpp2r5cAuthority691318Mapping file idENSRNOG00000004973 Ensembl fileEvidenceIEA
GenePpp2r5dAuthority363193Mapping file id363193 NCBI fileEvidenceIEA
GenePpp2r5eAuthority299147Mapping file id299147 NCBI fileEvidenceIEA
GenePrkg1Authority54286Mapping file id54286 NCBI fileEvidenceIEA
GenePrkg2Authority25523Mapping file id25523 NCBI fileEvidenceIEA
GenePtgirAuthority292661Mapping file id292661 NCBI fileEvidenceIEA
GenePtpn11Authority25622Mapping file id25622 NCBI fileEvidenceIEA
GenePtpn6Authority116689Mapping file id116689 NCBI fileEvidenceIEA
GeneSlc8a1Authority29715Mapping file id29715 NCBI fileEvidenceIEA
GeneSlc8a2Authority140447Mapping file id140447 NCBI fileEvidenceIEA
GeneSlc8a3Authority140448Mapping file id140448 NCBI fileEvidenceIEA
GeneSriAuthority683667Mapping file idENSRNOG00000049780 Ensembl fileEvidenceIEA
GeneTrpc3Authority60395Mapping file id60395 NCBI fileEvidenceIEA
GeneTrpc7Authority282822Mapping file idENSRNOG00000012727 Ensembl fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.