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Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by MET

R-RNO-6806834 in Reactome release 97: under Signaling by Receptor Tyrosine Kinases, with 69 genes placed in it by the mapping files and 8 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-6806834 (human), R-MMU-6806834 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 69 genes in this rat pathway; showing 1 to 69, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 1
GeneArf6Authority79121Mapping file id79121 NCBI fileEvidenceIEA
GeneCblAuthority500985Mapping file id500985 NCBI fileEvidenceIEA
GeneCol11a1Authority25654Mapping file id25654 NCBI fileEvidenceIEA
GeneCol11a2Authority294279Mapping file id294279 NCBI fileEvidenceIEA
GeneCol24a1Authority499723Mapping file idENSRNOG00000014143 Ensembl fileEvidenceIEA
GeneCol27a1Authority298101Mapping file idENSRNOG00000007657 Ensembl fileEvidenceIEA
GeneCol2a1Authority25412Mapping file id25412 NCBI fileEvidenceIEA
GeneCol3a1Authority84032Mapping file id84032 NCBI fileEvidenceIEA
GeneCol5a1Authority85490Mapping file id85490 NCBI fileEvidenceIEA
GeneCol5a2Authority85250Mapping file idENSRNOG00000003736 Ensembl fileEvidenceIEA
GeneCol5a3Authority60379Mapping file id60379 NCBI fileEvidenceIEA
GeneCrkAuthority54245Mapping file id54245 NCBI fileEvidenceIEA
GeneCrklAuthority287942Mapping file id287942 NCBI fileEvidenceIEA
GeneDock7Authority313388Mapping file id313388 NCBI fileEvidenceIEA
GeneEps15Authority313474Mapping file id313474 NCBI fileEvidenceIEA
GeneFn1Authority25661Mapping file idENSRNOG00000014288 Ensembl fileEvidenceIEA
GeneGab1Authority361388Mapping file id361388 NCBI fileEvidenceIEA
GeneGga3Authority360658Mapping file id360658 NCBI fileEvidenceIEA
GeneGrb2Authority81504Mapping file id81504 NCBI fileEvidenceIEA
GeneHgfAuthority24446Mapping file id24446 NCBI fileEvidenceIEA
GeneHgfacAuthority58947Mapping file idENSRNOG00000009572 Ensembl fileEvidenceIEA
GeneHgsAuthority56084Mapping file id56084 NCBI fileEvidenceIEA
GeneHpnAuthority29135Mapping file id29135 NCBI fileEvidenceIEA
GeneHrasAuthority293621Mapping file id293621 NCBI fileEvidenceIEA
GeneItga2Authority170921Mapping file id170921 NCBI fileEvidenceIEA
GeneItga3Authority360606Mapping file id360606 NCBI fileEvidenceIEA
GeneItgb1Authority24511Mapping file id24511 NCBI fileEvidenceIEA
GeneKrasAuthority24525Mapping file id24525 NCBI fileEvidenceIEA
GeneKxd1Authority498606Mapping file idENSRNOG00000019971 Ensembl fileEvidenceIEA
GeneLama4Authority309816Mapping file id309816 NCBI fileEvidenceIEA
GeneLrig1Authority312574Mapping file id312574 NCBI fileEvidenceIEA
GeneMegf11Authority691517Mapping file id691517 NCBI fileEvidenceIEA
GeneMetAuthority24553Mapping file id24553 NCBI fileEvidenceIEA
GeneMuc20Authority303886Mapping file idENSRNOG00000001776 Ensembl fileEvidenceIEA
GeneNrasAuthority24605Mapping file id24605 NCBI fileEvidenceIEA
GenePik3caAuthority170911Mapping file id170911 NCBI fileEvidenceIEA
GenePik3r1Authority25513Mapping file id25513 NCBI fileEvidenceIEA
GenePtk2Authority25614Mapping file id25614 NCBI fileEvidenceIEA
GenePtpn1Authority24697Mapping file id24697 NCBI fileEvidenceIEA
GenePtpn11Authority25622Mapping file id25622 NCBI fileEvidenceIEA
GenePtpn2Authority117063Mapping file id117063 NCBI fileEvidenceIEA
GenePtprjAuthority29645Mapping file idENSRNOG00000034025 Ensembl fileEvidenceIEA
GeneRab4aAuthority25532Mapping file id25532 NCBI fileEvidenceIEA
GeneRab4bAuthority50866Mapping file id50866 NCBI fileEvidenceIEA
GeneRac1Authority363875Mapping file id363875 NCBI fileEvidenceIEA
GeneRanbp10Authority361396Mapping file id361396 NCBI fileEvidenceIEA
GeneRanbp9Authority364686Mapping file id364686 NCBI fileEvidenceIEA
GeneRap1aAuthority295347Mapping file id295347 NCBI fileEvidenceIEA
GeneRap1bAuthority171337Mapping file id171337 NCBI fileEvidenceIEA
GeneRapgef1Authority63881Mapping file idENSRNOG00000014316 Ensembl fileEvidenceIEA
GeneRps27aAuthority100912032Mapping file id100912032 NCBI fileEvidenceIEA
GeneSh3gl1Authority81922Mapping file id81922 NCBI fileEvidenceIEA
GeneSh3gl2Authority116743Mapping file id116743 NCBI fileEvidenceIEA
GeneSh3gl3Authority81921Mapping file id81921 NCBI fileEvidenceIEA
GeneSh3kbp1Authority84357Mapping file id84357 NCBI fileEvidenceIEA
GeneShc1Authority85385Mapping file id85385 NCBI fileEvidenceIEA
GeneSos1Authority313845Mapping file id313845 NCBI fileEvidenceIEA
GeneSpint1Authority311331Mapping file id311331 NCBI fileEvidenceIEA
GeneSpint2Authority292770Mapping file id292770 NCBI fileEvidenceIEA
GeneSrcAuthority83805Mapping file id83805 NCBI fileEvidenceIEA
GeneStamAuthority498798Mapping file id498798 NCBI fileEvidenceIEA
GeneStam2Authority311030Mapping file id311030 NCBI fileEvidenceIEA
GeneStat3Authority25125Mapping file id25125 NCBI fileEvidenceIEA
GeneTns3Authority360980Mapping file idENSRNOG00000025695 Ensembl fileEvidenceIEA
GeneTns4Authority303517Mapping file id303517 NCBI fileEvidenceIEA
GeneUba52Authority64156Mapping file id64156 NCBI fileEvidenceIEA
GeneUbbAuthority192255Mapping file id192255 NCBI fileEvidenceIEA
GeneUbcAuthority50522Mapping file id50522 NCBI fileEvidenceIEA
GeneUsp8Authority296121Mapping file id296121 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.