Skip to content
Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

G2/M Checkpoints

R-RNO-69481 in Reactome release 97: under Cell Cycle Checkpoints, with 135 genes placed in it by the mapping files and 3 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-69481 (human), R-MMU-69481 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 135 genes in this rat pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 2
GeneAbraxas1Authority289468Mapping file id289468 NCBI fileEvidenceIEA
GeneAdrm1Authority65138Mapping file id65138 NCBI fileEvidenceIEA
GeneAtmAuthority300711Mapping file id300711 NCBI fileEvidenceIEA
GeneAtrAuthority685055Mapping file id685055 NCBI fileEvidenceIEA
GeneAtripAuthority301014Mapping file idENSRNOG00000020670 Ensembl fileEvidenceIEA
GeneBabam1Authority290631Mapping file id290631 NCBI fileEvidenceIEA
GeneBabam2Authority362704Mapping file id362704 NCBI fileEvidenceIEA
GeneBard1Authority64557Mapping file id64557 NCBI fileEvidenceIEA
GeneBlmAuthority308755Mapping file id308755 NCBI fileEvidenceIEA
GeneBrca1Authority497672Mapping file id497672 NCBI fileEvidenceIEA
GeneBrcc3Authority316794Mapping file id316794 NCBI fileEvidenceIEA
GeneBrip1Authority360588Mapping file id360588 NCBI fileEvidenceIEA
GeneCcna1Authority295052Mapping file id295052 NCBI fileEvidenceIEA
GeneCcna2Authority114494Mapping file id114494 NCBI fileEvidenceIEA
GeneCcnb1Authority25203Mapping file id25203 NCBI fileEvidenceIEA
GeneCcnb2Authority363088Mapping file idENSRNOG00000063216 Ensembl fileEvidenceIEA
GeneCcnb2-ps2Authority100364016Mapping file idENSRNOG00000055111 Ensembl fileEvidenceIEA
GeneCdc25aAuthority171102Mapping file id171102 NCBI fileEvidenceIEA
GeneCdc25cAuthority307511Mapping file id307511 NCBI fileEvidenceIEA
GeneCdc6Authority360621Mapping file id360621 NCBI fileEvidenceIEA
GeneCdc7Authority360908Mapping file id360908 NCBI fileEvidenceIEA
GeneCdk1Authority54237Mapping file id54237 NCBI fileEvidenceIEA
GeneCdk2Authority362817Mapping file idENSRNOG00000006469 Ensembl fileEvidenceIEA
GeneChek1Authority140583Mapping file id140583 NCBI fileEvidenceIEA
GeneChek2Authority114212Mapping file id114212 NCBI fileEvidenceIEA
GeneClspnAuthority298534Mapping file id298534 NCBI fileEvidenceIEA
GeneDbf4Authority312046Mapping file id312046 NCBI fileEvidenceIEA
GeneExo1Authority305000Mapping file id305000 NCBI fileEvidenceIEA
GeneGtse1Authority300126Mapping file id300126 NCBI fileEvidenceIEA
GeneH2axAuthority500987Mapping file idENSRNOG00000074924 Ensembl fileEvidenceIEA
GeneH2bc1Authority24829Mapping file id24829 NCBI fileEvidenceIEA
GeneH2bc12Authority680312Mapping file idENSRNOG00000064540 Ensembl fileEvidenceIEA
GeneH2bc12l1Authority100365043Mapping file idENSRNOG00000089792 Ensembl fileEvidenceIEA
GeneH2bc27Authority691488Mapping file idENSRNOG00000085593 Ensembl fileEvidenceIEA
GeneH2bcl1Authority100910200Mapping file idENSRNOG00000070916 Ensembl fileEvidenceIEA
GeneH4c1Authority291152Mapping file id291152 NCBI fileEvidenceIEA
GeneH4c14Authority295277Mapping file id295277 NCBI fileEvidenceIEA
GeneH4c8Authority64627Mapping file id64627 NCBI fileEvidenceIEA
GeneHerc2Authority308669Mapping file id308669 NCBI fileEvidenceIEA
GeneHist1h2aoAuthority364723Mapping file idENSRNOG00000066473 Ensembl fileEvidenceIEA
GeneHist1h2bgAuthority64647Mapping file idENSRNOG00000070362 Ensembl fileEvidenceIEA
GeneHist1h2bqAuthority306945Mapping file id306945 NCBI fileEvidenceIEA
GeneHist3h2baAuthority303175Mapping file id303175 NCBI fileEvidenceIEA
GeneHus1Authority498411Mapping file id498411 NCBI fileEvidenceIEA
GeneKat5Authority192218Mapping file id192218 NCBI fileEvidenceIEA
GeneKxd1Authority498606Mapping file idENSRNOG00000019971 Ensembl fileEvidenceIEA
GeneLOC147995116Authority147995116Mapping file idENSRNOG00000067648 Ensembl fileEvidenceIEA
GeneLOC148000144Authority148000144Mapping file idENSRNOG00000065263 Ensembl fileEvidenceIEA
GeneLOC148000146Authority148000146Mapping file idENSRNOG00000070513 Ensembl fileEvidenceIEA
GeneMcm10Authority307126Mapping file id307126 NCBI fileEvidenceIEA
GeneMcm2Authority312538Mapping file id312538 NCBI fileEvidenceIEA
GeneMcm3Authority316273Mapping file id316273 NCBI fileEvidenceIEA
GeneMcm4Authority29728Mapping file id29728 NCBI fileEvidenceIEA
GeneMcm5Authority291885Mapping file idENSRNOG00000014336 Ensembl fileEvidenceIEA
GeneMcm7Authority288532Mapping file id288532 NCBI fileEvidenceIEA
GeneMcm8Authority296178Mapping file id296178 NCBI fileEvidenceIEA
GeneMre11Authority64046Mapping file id64046 NCBI fileEvidenceIEA
GeneNbnAuthority85482Mapping file id85482 NCBI fileEvidenceIEA
GeneNsd2Authority680537Mapping file idENSRNOG00000038140 Ensembl fileEvidenceIEA
GeneOrc1Authority313479Mapping file id313479 NCBI fileEvidenceIEA
GeneOrc2Authority301430Mapping file id301430 NCBI fileEvidenceIEA
GeneOrc3Authority313138Mapping file id313138 NCBI fileEvidenceIEA
GeneOrc4Authority295596Mapping file id295596 NCBI fileEvidenceIEA
GeneOrc5Authority362304Mapping file id362304 NCBI fileEvidenceIEA
GeneOrc6Authority291927Mapping file id291927 NCBI fileEvidenceIEA
GenePias4Authority362827Mapping file id362827 NCBI fileEvidenceIEA
GenePkmyt1Authority287101Mapping file id287101 NCBI fileEvidenceIEA
GenePsma1Authority29668Mapping file id29668 NCBI fileEvidenceIEA
GenePsma2Authority29669Mapping file id29669 NCBI fileEvidenceIEA
GenePsma3Authority29670Mapping file id29670 NCBI fileEvidenceIEA
GenePsma4Authority29671Mapping file id29671 NCBI fileEvidenceIEA
GenePsma5Authority29672Mapping file idENSRNOG00000019868 Ensembl fileEvidenceIEA
GenePsma6Authority29673Mapping file id29673 NCBI fileEvidenceIEA
GenePsma7Authority29674Mapping file idENSRNOG00000056853 Ensembl fileEvidenceIEA
GenePsmb1Authority94198Mapping file id94198 NCBI fileEvidenceIEA
GenePsmb2Authority29675Mapping file id29675 NCBI fileEvidenceIEA
GenePsmb3Authority29676Mapping file id29676 NCBI fileEvidenceIEA
GenePsmb5Authority29425Mapping file id29425 NCBI fileEvidenceIEA
GenePsmb6Authority29666Mapping file id29666 NCBI fileEvidenceIEA
GenePsmb6l1Authority100360846Mapping file id100360846 NCBI fileEvidenceIEA
GenePsmb7Authority85492Mapping file id85492 NCBI fileEvidenceIEA
GenePsmc1Authority117263Mapping file id117263 NCBI fileEvidenceIEA
GenePsmc2Authority25581Mapping file id25581 NCBI fileEvidenceIEA
GenePsmc3Authority29677Mapping file id29677 NCBI fileEvidenceIEA
GenePsmc4Authority117262Mapping file id117262 NCBI fileEvidenceIEA
GenePsmc5Authority81827Mapping file id81827 NCBI fileEvidenceIEA
GenePsmd1Authority83806Mapping file id83806 NCBI fileEvidenceIEA
GenePsmd11Authority303353Mapping file id303353 NCBI fileEvidenceIEA
GenePsmd12Authority287772Mapping file id287772 NCBI fileEvidenceIEA
GenePsmd13Authority365388Mapping file id365388 NCBI fileEvidenceIEA
GenePsmd14Authority311078Mapping file id311078 NCBI fileEvidenceIEA
GenePsmd2Authority287984Mapping file id287984 NCBI fileEvidenceIEA
GenePsmd3Authority287670Mapping file idENSRNOG00000028103 Ensembl fileEvidenceIEA
GenePsmd6Authority289924Mapping file idENSRNOG00000006751 Ensembl fileEvidenceIEA
GenePsmd7Authority307821Mapping file idENSRNOG00000014097 Ensembl fileEvidenceIEA
GenePsmd8Authority292766Mapping file id292766 NCBI fileEvidenceIEA
GeneRad1Authority294800Mapping file id294800 NCBI fileEvidenceIEA
GeneRad17Authority310034Mapping file id310034 NCBI fileEvidenceIEA
GeneRad50Authority64012Mapping file id64012 NCBI fileEvidenceIEA
GeneRad9aAuthority100361529Mapping file id100361529 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.