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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

G2/M DNA damage checkpoint

R-RNO-69473 in Reactome release 97: under G2/M Checkpoints, with 77 genes placed in it by the mapping files and 1 child pathway in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-69473 (human), R-MMU-69473 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 77 genes in this rat pathway; showing 1 to 77, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 1
GeneAbraxas1Authority289468Mapping file id289468 NCBI fileEvidenceIEA
GeneAtmAuthority300711Mapping file id300711 NCBI fileEvidenceIEA
GeneAtrAuthority685055Mapping file id685055 NCBI fileEvidenceIEA
GeneAtripAuthority301014Mapping file idENSRNOG00000020670 Ensembl fileEvidenceIEA
GeneBabam1Authority290631Mapping file id290631 NCBI fileEvidenceIEA
GeneBabam2Authority362704Mapping file id362704 NCBI fileEvidenceIEA
GeneBard1Authority64557Mapping file id64557 NCBI fileEvidenceIEA
GeneBlmAuthority308755Mapping file id308755 NCBI fileEvidenceIEA
GeneBrca1Authority497672Mapping file id497672 NCBI fileEvidenceIEA
GeneBrcc3Authority316794Mapping file id316794 NCBI fileEvidenceIEA
GeneBrip1Authority360588Mapping file id360588 NCBI fileEvidenceIEA
GeneCcna1Authority295052Mapping file id295052 NCBI fileEvidenceIEA
GeneCcna2Authority114494Mapping file id114494 NCBI fileEvidenceIEA
GeneCcnb1Authority25203Mapping file id25203 NCBI fileEvidenceIEA
GeneCdc25cAuthority307511Mapping file id307511 NCBI fileEvidenceIEA
GeneCdk1Authority54237Mapping file id54237 NCBI fileEvidenceIEA
GeneChek1Authority140583Mapping file id140583 NCBI fileEvidenceIEA
GeneChek2Authority114212Mapping file id114212 NCBI fileEvidenceIEA
GeneExo1Authority305000Mapping file id305000 NCBI fileEvidenceIEA
GeneH2axAuthority500987Mapping file idENSRNOG00000074924 Ensembl fileEvidenceIEA
GeneH2bc1Authority24829Mapping file id24829 NCBI fileEvidenceIEA
GeneH2bc12Authority680312Mapping file idENSRNOG00000064540 Ensembl fileEvidenceIEA
GeneH2bc12l1Authority100365043Mapping file idENSRNOG00000089792 Ensembl fileEvidenceIEA
GeneH2bc27Authority691488Mapping file idENSRNOG00000085593 Ensembl fileEvidenceIEA
GeneH2bcl1Authority100910200Mapping file idENSRNOG00000070916 Ensembl fileEvidenceIEA
GeneH4c1Authority291152Mapping file id291152 NCBI fileEvidenceIEA
GeneH4c14Authority295277Mapping file id295277 NCBI fileEvidenceIEA
GeneH4c8Authority64627Mapping file id64627 NCBI fileEvidenceIEA
GeneHerc2Authority308669Mapping file id308669 NCBI fileEvidenceIEA
GeneHist1h2aoAuthority364723Mapping file idENSRNOG00000066473 Ensembl fileEvidenceIEA
GeneHist1h2bgAuthority64647Mapping file idENSRNOG00000070362 Ensembl fileEvidenceIEA
GeneHist1h2bqAuthority306945Mapping file id306945 NCBI fileEvidenceIEA
GeneHist3h2baAuthority303175Mapping file id303175 NCBI fileEvidenceIEA
GeneHus1Authority498411Mapping file id498411 NCBI fileEvidenceIEA
GeneKat5Authority192218Mapping file id192218 NCBI fileEvidenceIEA
GeneLOC147995116Authority147995116Mapping file idENSRNOG00000067648 Ensembl fileEvidenceIEA
GeneLOC148000144Authority148000144Mapping file idENSRNOG00000065263 Ensembl fileEvidenceIEA
GeneLOC148000146Authority148000146Mapping file idENSRNOG00000070513 Ensembl fileEvidenceIEA
GeneMre11Authority64046Mapping file id64046 NCBI fileEvidenceIEA
GeneNbnAuthority85482Mapping file id85482 NCBI fileEvidenceIEA
GeneNsd2Authority680537Mapping file idENSRNOG00000038140 Ensembl fileEvidenceIEA
GenePias4Authority362827Mapping file id362827 NCBI fileEvidenceIEA
GeneRad1Authority294800Mapping file id294800 NCBI fileEvidenceIEA
GeneRad17Authority310034Mapping file id310034 NCBI fileEvidenceIEA
GeneRad50Authority64012Mapping file id64012 NCBI fileEvidenceIEA
GeneRad9aAuthority100361529Mapping file id100361529 NCBI fileEvidenceIEA
GeneRad9bAuthority363924Mapping file id363924 NCBI fileEvidenceIEA
GeneRbbp8Authority291787Mapping file id291787 NCBI fileEvidenceIEA
GeneRfc2Authority116468Mapping file id116468 NCBI fileEvidenceIEA
GeneRfc3Authority288414Mapping file id288414 NCBI fileEvidenceIEA
GeneRfc4Authority288003Mapping file id288003 NCBI fileEvidenceIEA
GeneRfc5Authority304528Mapping file idENSRNOG00000001134 Ensembl fileEvidenceIEA
GeneRhno1Authority297627Mapping file id297627 NCBI fileEvidenceIEA
GeneRmi1Authority306734Mapping file id306734 NCBI fileEvidenceIEA
GeneRmi2Authority497856Mapping file id497856 NCBI fileEvidenceIEA
GeneRnf168Authority690043Mapping file id690043 NCBI fileEvidenceIEA
GeneRnf8Authority361815Mapping file id361815 NCBI fileEvidenceIEA
GeneRpa1Authority287524Mapping file idENSRNOG00000003123 Ensembl fileEvidenceIEA
GeneRpa2Authority59102Mapping file id59102 NCBI fileEvidenceIEA
GeneSfnAuthority313017Mapping file id313017 NCBI fileEvidenceIEA
GeneSlc25a16Authority361836Mapping file idENSRNOG00000000387 Ensembl fileEvidenceIEA
GeneStt3aAuthority500972Mapping file idENSRNOG00000031896 Ensembl fileEvidenceIEA
GeneTop3aAuthority303194Mapping file id303194 NCBI fileEvidenceIEA
GeneTopbp1Authority315969Mapping file id315969 NCBI fileEvidenceIEA
GeneTp53Authority24842Mapping file id24842 NCBI fileEvidenceIEA
GeneTp53bp1Authority296099Mapping file id296099 NCBI fileEvidenceIEA
GeneUbe2nAuthority116725Mapping file id116725 NCBI fileEvidenceIEA
GeneUbe2v2Authority287927Mapping file id287927 NCBI fileEvidenceIEA
GeneUimc1Authority290997Mapping file id290997 NCBI fileEvidenceIEA
GeneWee1Authority308937Mapping file id308937 NCBI fileEvidenceIEA
GeneWrnAuthority290805Mapping file id290805 NCBI fileEvidenceIEA
GeneYwhabAuthority56011Mapping file id56011 NCBI fileEvidenceIEA
GeneYwhaeAuthority29753Mapping file id29753 NCBI fileEvidenceIEA
GeneYwhagAuthority56010Mapping file id56010 NCBI fileEvidenceIEA
GeneYwhahAuthority25576Mapping file id25576 NCBI fileEvidenceIEA
GeneYwhaqAuthority25577Mapping file id25577 NCBI fileEvidenceIEA
GeneYwhazAuthority25578Mapping file id25578 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.