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Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

RND2 GTPase cycle

R-RNO-9696270 in Reactome release 97: under RHO GTPase cycle, with 39 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9696270 (human), R-MMU-9696270 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 39 genes in this rat pathway; showing 1 to 39, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 1
GeneAldh3a2Authority65183Mapping file id65183 NCBI fileEvidenceIEA
GeneAnkrd26Authority312667Mapping file id312667 NCBI fileEvidenceIEA
GeneArhgap1Authority311193Mapping file idENSRNOG00000016610 Ensembl fileEvidenceIEA
GeneArhgap35Authority306400Mapping file id306400 NCBI fileEvidenceIEA
GeneArhgap5Authority299012Mapping file id299012 NCBI fileEvidenceIEA
GeneBltp3bAuthority363009Mapping file id363009 NCBI fileEvidenceIEA
GeneCkap4Authority362859Mapping file id362859 NCBI fileEvidenceIEA
GeneDepdc1bAuthority310074Mapping file id310074 NCBI fileEvidenceIEA
GeneDlg5Authority305645Mapping file id305645 NCBI fileEvidenceIEA
GeneDsg1Authority291755Mapping file id291755 NCBI fileEvidenceIEA
GeneDstAuthority316313Mapping file idENSRNOG00000012207 Ensembl fileEvidenceIEA
GeneEpha2Authority366492Mapping file id366492 NCBI fileEvidenceIEA
GeneFnbp1Authority192348Mapping file id192348 NCBI fileEvidenceIEA
GeneFrs2Authority314850Mapping file id314850 NCBI fileEvidenceIEA
GeneFrs3Authority316213Mapping file id316213 NCBI fileEvidenceIEA
GeneGolga3Authority312077Mapping file id312077 NCBI fileEvidenceIEA
GeneKctd13Authority293497Mapping file id293497 NCBI fileEvidenceIEA
GeneKidins220Authority116478Mapping file id116478 NCBI fileEvidenceIEA
GeneKif14Authority360849Mapping file id360849 NCBI fileEvidenceIEA
GeneKtn1Authority361029Mapping file id361029 NCBI fileEvidenceIEA
GeneMuc13Authority207126Mapping file idENSRNOG00000001794 Ensembl fileEvidenceIEA
GeneNischAuthority306255Mapping file idENSRNOG00000018823 Ensembl fileEvidenceIEA
GeneNudcAuthority29648Mapping file id29648 NCBI fileEvidenceIEA
GenePik3r1Authority25513Mapping file id25513 NCBI fileEvidenceIEA
GenePkp4Authority295625Mapping file idENSRNOG00000005504 Ensembl fileEvidenceIEA
GenePlxnd1Authority312652Mapping file idENSRNOG00000025209 Ensembl fileEvidenceIEA
GenePrag1Authority306506Mapping file id306506 NCBI fileEvidenceIEA
GenePtpn13Authority498331Mapping file id498331 NCBI fileEvidenceIEA
GeneRbmxAuthority302855Mapping file id302855 NCBI fileEvidenceIEA
GeneRnd2Authority303553Mapping file id303553 NCBI fileEvidenceIEA
GeneSack1bAuthority315829Mapping file id315829 NCBI fileEvidenceIEA
GeneScribAuthority362938Mapping file id362938 NCBI fileEvidenceIEA
GeneTfrcAuthority64678Mapping file id64678 NCBI fileEvidenceIEA
GeneTnfaip1Authority287543Mapping file id287543 NCBI fileEvidenceIEA
GeneTxnl1Authority140922Mapping file id140922 NCBI fileEvidenceIEA
GeneUbxn11Authority192207Mapping file id192207 NCBI fileEvidenceIEA
GeneVangl1Authority690366Mapping file idENSRNOG00000016477 Ensembl fileEvidenceIEA
GeneVangl2Authority289229Mapping file id289229 NCBI fileEvidenceIEA
GeneWdr6Authority301007Mapping file id301007 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.