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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by Rho GTPases, Miro GTPases and RHOBTB3

R-RNO-9716542 in Reactome release 97: under Signal Transduction, with 629 genes placed in it by the mapping files and 3 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9716542 (human), R-MMU-9716542 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 629 genes in this rat pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 7
GeneAaasAuthority300259Mapping file idENSRNOG00000013445 Ensembl fileEvidenceIEA
GeneAbcd3Authority25270Mapping file id25270 NCBI fileEvidenceIEA
GeneAbi1Authority79249Mapping file id79249 NCBI fileEvidenceIEA
GeneAbi2Authority286928Mapping file id286928 NCBI fileEvidenceIEA
GeneAbl1Authority311860Mapping file id311860 NCBI fileEvidenceIEA
GeneAbl2Authority304883Mapping file idENSRNOG00000004305 Ensembl fileEvidenceIEA
GeneAbrAuthority287537Mapping file id287537 NCBI fileEvidenceIEA
GeneAcbd5Authority307170Mapping file id307170 NCBI fileEvidenceIEA
GeneActbAuthority81822Mapping file id81822 NCBI fileEvidenceIEA
GeneActc1Authority29275Mapping file id29275 NCBI fileEvidenceIEA
GeneActg1Authority287876Mapping file id287876 NCBI fileEvidenceIEA
GeneActn1Authority81634Mapping file id81634 NCBI fileEvidenceIEA
GeneActr2Authority289820Mapping file id289820 NCBI fileEvidenceIEA
GeneActr3Authority81732Mapping file id81732 NCBI fileEvidenceIEA
GeneAdd3Authority25230Mapping file id25230 NCBI fileEvidenceIEA
GeneAhctf1Authority360886Mapping file idENSRNOG00000023541 Ensembl fileEvidenceIEA
GeneAkap12Authority83425Mapping file id83425 NCBI fileEvidenceIEA
GeneAkap13Authority293024Mapping file id293024 NCBI fileEvidenceIEA
GeneAldh3a2Authority65183Mapping file id65183 NCBI fileEvidenceIEA
GeneAls2Authority363235Mapping file id363235 NCBI fileEvidenceIEA
GeneAmigo2Authority300186Mapping file id300186 NCBI fileEvidenceIEA
GeneAnkle2Authority360829Mapping file idENSRNOG00000060144 Ensembl fileEvidenceIEA
GeneAnkrd26Authority312667Mapping file id312667 NCBI fileEvidenceIEA
GeneAnlnAuthority363031Mapping file id363031 NCBI fileEvidenceIEA
GeneArAuthority24208Mapping file id24208 NCBI fileEvidenceIEA
GeneArap1Authority361617Mapping file id361617 NCBI fileEvidenceIEA
GeneArap2Authority305367Mapping file id305367 NCBI fileEvidenceIEA
GeneArap3Authority361314Mapping file idENSRNOG00000055527 Ensembl fileEvidenceIEA
GeneArfgap3Authority503165Mapping file id503165 NCBI fileEvidenceIEA
GeneArhgap1Authority311193Mapping file idENSRNOG00000016610 Ensembl fileEvidenceIEA
GeneArhgap10Authority688429Mapping file id688429 NCBI fileEvidenceIEA
GeneArhgap11aAuthority296060Mapping file id296060 NCBI fileEvidenceIEA
GeneArhgap12Authority307016Mapping file id307016 NCBI fileEvidenceIEA
GeneArhgap15Authority295635Mapping file id295635 NCBI fileEvidenceIEA
GeneArhgap17Authority63994Mapping file id63994 NCBI fileEvidenceIEA
GeneArhgap18Authority293947Mapping file id293947 NCBI fileEvidenceIEA
GeneArhgap19Authority679082Mapping file id679082 NCBI fileEvidenceIEA
GeneArhgap20Authority367085Mapping file id367085 NCBI fileEvidenceIEA
GeneArhgap21Authority307178Mapping file idENSRNOG00000008659 Ensembl fileEvidenceIEA
GeneArhgap22Authority306279Mapping file id306279 NCBI fileEvidenceIEA
GeneArhgap23Authority303501Mapping file id303501 NCBI fileEvidenceIEA
GeneArhgap24Authority305156Mapping file id305156 NCBI fileEvidenceIEA
GeneArhgap25Authority500246Mapping file id500246 NCBI fileEvidenceIEA
GeneArhgap26Authority307459Mapping file id307459 NCBI fileEvidenceIEA
GeneArhgap27Authority303583Mapping file id303583 NCBI fileEvidenceIEA
GeneArhgap28Authority301709Mapping file idENSRNOG00000017065 Ensembl fileEvidenceIEA
GeneArhgap29Authority310833Mapping file id310833 NCBI fileEvidenceIEA
GeneArhgap30Authority498282Mapping file id498282 NCBI fileEvidenceIEA
GeneArhgap31Authority288093Mapping file id288093 NCBI fileEvidenceIEA
GeneArhgap32Authority315530Mapping file idENSRNOG00000008709 Ensembl fileEvidenceIEA
GeneArhgap33Authority100362311Mapping file idENSRNOG00000024677 Ensembl fileEvidenceIEA
GeneArhgap35Authority306400Mapping file id306400 NCBI fileEvidenceIEA
GeneArhgap4Authority246249Mapping file id246249 NCBI fileEvidenceIEA
GeneArhgap40Authority296323Mapping file id296323 NCBI fileEvidenceIEA
GeneArhgap42Authority500943Mapping file idENSRNOG00000026821 Ensembl fileEvidenceIEA
GeneArhgap44Authority303222Mapping file id303222 NCBI fileEvidenceIEA
GeneArhgap45Authority314618Mapping file id314618 NCBI fileEvidenceIEA
GeneArhgap5Authority299012Mapping file id299012 NCBI fileEvidenceIEA
GeneArhgap6Authority100363276Mapping file id100363276 NCBI fileEvidenceIEA
GeneArhgap8Authority300115Mapping file id300115 NCBI fileEvidenceIEA
GeneArhgap9Authority362893Mapping file id362893 NCBI fileEvidenceIEA
GeneArhgdiaAuthority360678Mapping file id360678 NCBI fileEvidenceIEA
GeneArhgdibAuthority362456Mapping file id362456 NCBI fileEvidenceIEA
GeneArhgdigAuthority360500Mapping file id360500 NCBI fileEvidenceIEA
GeneArhgef1Authority60323Mapping file idENSRNOG00000020130 Ensembl fileEvidenceIEA
GeneArhgef10Authority306618Mapping file id306618 NCBI fileEvidenceIEA
GeneArhgef10lAuthority684811Mapping file idENSRNOG00000050636 Ensembl fileEvidenceIEA
GeneArhgef11Authority78966Mapping file id78966 NCBI fileEvidenceIEA
GeneArhgef12Authority367072Mapping file idENSRNOG00000008924 Ensembl fileEvidenceIEA
GeneArhgef15Authority287418Mapping file id287418 NCBI fileEvidenceIEA
GeneArhgef16Authority687105Mapping file id687105 NCBI fileEvidenceIEA
GeneArhgef17Authority120099896Mapping file id120099896 NCBI fileEvidenceIEA
GeneArhgef19Authority362648Mapping file id362648 NCBI fileEvidenceIEA
GeneArhgef2Authority310635Mapping file id310635 NCBI fileEvidenceIEA
GeneArhgef25Authority314904Mapping file idENSRNOG00000005034 Ensembl fileEvidenceIEA
GeneArhgef26Authority310460Mapping file id310460 NCBI fileEvidenceIEA
GeneArhgef28Authority361882Mapping file id361882 NCBI fileEvidenceIEA
GeneArhgef3Authority290541Mapping file idENSRNOG00000014363 Ensembl fileEvidenceIEA
GeneArhgef39Authority298404Mapping file id298404 NCBI fileEvidenceIEA
GeneArhgef4Authority301334Mapping file id301334 NCBI fileEvidenceIEA
GeneArhgef5Authority140898Mapping file id140898 NCBI fileEvidenceIEA
GeneArhgef6Authority363509Mapping file id363509 NCBI fileEvidenceIEA
GeneArhgef7Authority114559Mapping file id114559 NCBI fileEvidenceIEA
GeneArhgef9Authority66013Mapping file id66013 NCBI fileEvidenceIEA
GeneArl13bAuthority304037Mapping file idENSRNOG00000047194 Ensembl fileEvidenceIEA
GeneArmcx3Authority367902Mapping file id367902 NCBI fileEvidenceIEA
GeneArpc1aAuthority81824Mapping file id81824 NCBI fileEvidenceIEA
GeneArpc1bAuthority54227Mapping file id54227 NCBI fileEvidenceIEA
GeneArpc2Authority301511Mapping file idENSRNOG00000014289 Ensembl fileEvidenceIEA
GeneArpc3Authority288669Mapping file id288669 NCBI fileEvidenceIEA
GeneArpc4Authority297518Mapping file id297518 NCBI fileEvidenceIEA
GeneArpc5Authority360854Mapping file id360854 NCBI fileEvidenceIEA
GeneAtp6ap1Authority83615Mapping file id83615 NCBI fileEvidenceIEA
GeneAurkbAuthority114592Mapping file id114592 NCBI fileEvidenceIEA
GeneB9d2Authority308443Mapping file id308443 NCBI fileEvidenceIEA
GeneBaiap2Authority117542Mapping file id117542 NCBI fileEvidenceIEA
GeneBaiap2l1Authority304282Mapping file id304282 NCBI fileEvidenceIEA
GeneBaiap2l2Authority685357Mapping file id685357 NCBI fileEvidenceIEA
GeneBasp1Authority64160Mapping file id64160 NCBI fileEvidenceIEA
GeneBcap31Authority293852Mapping file idENSRNOG00000055756 Ensembl fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.