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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Factors involved in megakaryocyte development and platelet production

R-RNO-983231 in Reactome release 97: under Hemostasis, with 119 genes placed in it by the mapping files and 1 child pathway in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-983231 (human), R-MMU-983231 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 119 genes in this rat pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 2
GeneAk3Authority26956Mapping file id26956 NCBI fileEvidenceIEA
GeneAkap1Authority114124Mapping file id114124 NCBI fileEvidenceIEA
GeneAkap10Authority360540Mapping file idENSRNOG00000002899 Ensembl fileEvidenceIEA
GeneCbx5Authority300266Mapping file id300266 NCBI fileEvidenceIEA
GeneCdc42Authority64465Mapping file id64465 NCBI fileEvidenceIEA
GeneCenpeAuthority362044Mapping file idENSRNOG00000009339 Ensembl fileEvidenceIEA
GeneDock10Authority301556Mapping file idENSRNOG00000053200 Ensembl fileEvidenceIEA
GeneDock11Authority313438Mapping file id313438 NCBI fileEvidenceIEA
GeneDock2Authority360509Mapping file id360509 NCBI fileEvidenceIEA
GeneDock3Authority315992Mapping file id315992 NCBI fileEvidenceIEA
GeneDock4Authority366608Mapping file id366608 NCBI fileEvidenceIEA
GeneDock5Authority305987Mapping file id305987 NCBI fileEvidenceIEA
GeneDock6Authority367039Mapping file idENSRNOG00000010652 Ensembl fileEvidenceIEA
GeneDock7Authority313388Mapping file id313388 NCBI fileEvidenceIEA
GeneDock8Authority499337Mapping file idENSRNOG00000015894 Ensembl fileEvidenceIEA
GeneEhd1Authority293692Mapping file id293692 NCBI fileEvidenceIEA
GeneEhd2Authority361512Mapping file id361512 NCBI fileEvidenceIEA
GeneEhd3Authority192249Mapping file id192249 NCBI fileEvidenceIEA
GeneGata1Authority25172Mapping file id25172 NCBI fileEvidenceIEA
GeneGata2Authority25159Mapping file id25159 NCBI fileEvidenceIEA
GeneGata3Authority85471Mapping file id85471 NCBI fileEvidenceIEA
GeneGata4Authority54254Mapping file id54254 NCBI fileEvidenceIEA
GeneGata5Authority499951Mapping file id499951 NCBI fileEvidenceIEA
GeneGata6Authority29300Mapping file id29300 NCBI fileEvidenceIEA
GeneH3c1Authority679994Mapping file id679994 NCBI fileEvidenceIEA
GeneH3c10Authority291159Mapping file id291159 NCBI fileEvidenceIEA
GeneH3c13Authority684762Mapping file idENSRNOG00000080043 Ensembl fileEvidenceIEA
GeneH3c15Authority310678Mapping file idENSRNOG00000070591 Ensembl fileEvidenceIEA
GeneH3f3aAuthority100361558Mapping file idENSRNOG00000003220 Ensembl fileEvidenceIEA
GeneH3f3bAuthority117056Mapping file id117056 NCBI fileEvidenceIEA
GeneHdac1Authority297893Mapping file id297893 NCBI fileEvidenceIEA
GeneHdac2Authority84577Mapping file idENSRNOG00000000604 Ensembl fileEvidenceIEA
GeneHist1h3bAuthority680498Mapping file id680498 NCBI fileEvidenceIEA
GeneHmg20bAuthority362825Mapping file id362825 NCBI fileEvidenceIEA
GeneItpk1Authority500709Mapping file id500709 NCBI fileEvidenceIEA
GeneJak2Authority24514Mapping file id24514 NCBI fileEvidenceIEA
GeneJmjd1cAuthority171120Mapping file id171120 NCBI fileEvidenceIEA
GeneKdm1aAuthority500569Mapping file id500569 NCBI fileEvidenceIEA
GeneKif11Authority171304Mapping file idENSRNOG00000056069 Ensembl fileEvidenceIEA
GeneKif12Authority313254Mapping file id313254 NCBI fileEvidenceIEA
GeneKif13bAuthority305967Mapping file idENSRNOG00000013089 Ensembl fileEvidenceIEA
GeneKif15Authority353302Mapping file id353302 NCBI fileEvidenceIEA
GeneKif16bAuthority311478Mapping file idENSRNOG00000004951 Ensembl fileEvidenceIEA
GeneKif18aAuthority362186Mapping file idENSRNOG00000005037 Ensembl fileEvidenceIEA
GeneKif18bAuthority303575Mapping file id303575 NCBI fileEvidenceIEA
GeneKif19Authority303659Mapping file id303659 NCBI fileEvidenceIEA
GeneKif1aAuthority363288Mapping file id363288 NCBI fileEvidenceIEA
GeneKif1bAuthority117548Mapping file id117548 NCBI fileEvidenceIEA
GeneKif1cAuthority113886Mapping file id113886 NCBI fileEvidenceIEA
GeneKif20aAuthority361308Mapping file id361308 NCBI fileEvidenceIEA
GeneKif20bAuthority309523Mapping file id309523 NCBI fileEvidenceIEA
GeneKif21aAuthority300158Mapping file id300158 NCBI fileEvidenceIEA
GeneKif21bAuthority289397Mapping file id289397 NCBI fileEvidenceIEA
GeneKif22Authority293502Mapping file id293502 NCBI fileEvidenceIEA
GeneKif23Authority315740Mapping file id315740 NCBI fileEvidenceIEA
GeneKif26aAuthority314473Mapping file id314473 NCBI fileEvidenceIEA
GeneKif26bAuthority305012Mapping file idENSRNOG00000028624 Ensembl fileEvidenceIEA
GeneKif27Authority246209Mapping file id246209 NCBI fileEvidenceIEA
GeneKif28Authority289309Mapping file id289309 NCBI fileEvidenceIEA
GeneKif2aAuthority84391Mapping file idENSRNOG00000014000 Ensembl fileEvidenceIEA
GeneKif2bAuthority287624Mapping file id287624 NCBI fileEvidenceIEA
GeneKif2cAuthority171529Mapping file idENSRNOG00000019100 Ensembl fileEvidenceIEA
GeneKif3aAuthority84392Mapping file idENSRNOG00000007515 Ensembl fileEvidenceIEA
GeneKif3bAuthority296284Mapping file idENSRNOG00000010361 Ensembl fileEvidenceIEA
GeneKif3cAuthority85248Mapping file id85248 NCBI fileEvidenceIEA
GeneKif4aAuthority84393Mapping file id84393 NCBI fileEvidenceIEA
GeneKif4bAuthority299255Mapping file idENSRNOG00000064692 Ensembl fileEvidenceIEA
GeneKif5aAuthority314906Mapping file id314906 NCBI fileEvidenceIEA
GeneKif5bAuthority117550Mapping file id117550 NCBI fileEvidenceIEA
GeneKif6Authority171291Mapping file id171291 NCBI fileEvidenceIEA
GeneKif9Authority501059Mapping file idENSRNOG00000020891 Ensembl fileEvidenceIEA
GeneKifap3Authority289168Mapping file id289168 NCBI fileEvidenceIEA
GeneKifc1Authority294286Mapping file id294286 NCBI fileEvidenceIEA
GeneKifc2Authority300053Mapping file idENSRNOG00000060123 Ensembl fileEvidenceIEA
GeneKlc1Authority171041Mapping file id171041 NCBI fileEvidenceIEA
GeneKlc2Authority309159Mapping file idENSRNOG00000020299 Ensembl fileEvidenceIEA
GeneKlc3Authority171549Mapping file id171549 NCBI fileEvidenceIEA
GeneKlc4Authority316226Mapping file id316226 NCBI fileEvidenceIEA
GeneLOC148000145Authority148000145Mapping file idENSRNOG00000066835 Ensembl fileEvidenceIEA
GeneLOC148000156Authority148000156Mapping file idENSRNOG00000064755 Ensembl fileEvidenceIEA
GeneMaffAuthority366960Mapping file id366960 NCBI fileEvidenceIEA
GeneMafgAuthority64188Mapping file id64188 NCBI fileEvidenceIEA
GeneMfn1Authority192647Mapping file id192647 NCBI fileEvidenceIEA
GeneMfn2Authority64476Mapping file idENSRNOG00000046424 Ensembl fileEvidenceIEA
GeneNfe2Authority366998Mapping file id366998 NCBI fileEvidenceIEA
GenePhf21aAuthority362166Mapping file idENSRNOG00000006063 Ensembl fileEvidenceIEA
GenePrkacbAuthority293508Mapping file id293508 NCBI fileEvidenceIEA
GenePrkar1aAuthority25725Mapping file id25725 NCBI fileEvidenceIEA
GenePrkar1bAuthority25521Mapping file id25521 NCBI fileEvidenceIEA
GenePrkar2aAuthority29699Mapping file id29699 NCBI fileEvidenceIEA
GenePrkar2bAuthority24679Mapping file id24679 NCBI fileEvidenceIEA
GeneRab5aAuthority64633Mapping file id64633 NCBI fileEvidenceIEA
GeneRab5al1Authority100361891Mapping file idENSRNOG00000062595 Ensembl fileEvidenceIEA
GeneRac1Authority363875Mapping file id363875 NCBI fileEvidenceIEA
GeneRacgap1Authority315298Mapping file idENSRNOG00000049033 Ensembl fileEvidenceIEA
GeneRad51bAuthority500679Mapping file idENSRNOG00000059245 Ensembl fileEvidenceIEA
GeneRad51cAuthority497976Mapping file idENSRNOG00000006661 Ensembl fileEvidenceIEA
GeneRbsnAuthority312562Mapping file id312562 NCBI fileEvidenceIEA
GeneRcor1Authority102554884Mapping file id102554884 NCBI fileEvidenceIEA
GeneSh2b1Authority89817Mapping file id89817 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.