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Pathway Human Homo sapiens

Neutrophil degranulation

R-HSA-6798695 in Reactome release 97: under Innate Immune System, with 479 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-6798695 (mouse), R-RNO-6798695 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 479 genes in this human pathway; showing 401 to 479, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 5 of 5
GeneS100A11AuthorityHGNC:10488Mapping file id6282 NCBI fileEvidenceTAS
GeneS100A12AuthorityHGNC:10489Mapping file id6283 NCBI fileEvidenceTAS
GeneS100A7AuthorityHGNC:10497Mapping file id6278 NCBI fileEvidenceTAS
GeneS100A8AuthorityHGNC:10498Mapping file id6279 NCBI fileEvidenceTAS
GeneS100A9AuthorityHGNC:10499Mapping file id6280 NCBI fileEvidenceTAS
GeneS100PAuthorityHGNC:10504Mapping file id6286 NCBI fileEvidenceTAS
GeneSCAMP1AuthorityHGNC:10563Mapping file id9522 NCBI fileEvidenceTAS
GeneSDCBPAuthorityHGNC:10662Mapping file id6386 NCBI fileEvidenceTAS
GeneSELLAuthorityHGNC:10720Mapping file id6402 NCBI fileEvidenceTAS
GeneSERPINA1AuthorityHGNC:8941Mapping file id5265 NCBI fileEvidenceTAS
GeneSERPINA3AuthorityHGNC:16Mapping file id12 NCBI fileEvidenceTAS
GeneSERPINB1AuthorityHGNC:3311Mapping file id1992 NCBI fileEvidenceTAS
GeneSERPINB10AuthorityHGNC:8942Mapping file id5273 NCBI fileEvidenceTAS
GeneSERPINB12AuthorityHGNC:14220Mapping file id89777 NCBI fileEvidenceTAS
GeneSERPINB3AuthorityHGNC:10569Mapping file id6317 NCBI fileEvidenceTAS
GeneSERPINB6AuthorityHGNC:8950Mapping file id5269 NCBI fileEvidenceTAS
GeneSIGLEC14AuthorityHGNC:32926Mapping file id100049587 NCBI fileEvidenceTAS
GeneSIGLEC5AuthorityHGNC:10874Mapping file id8778 NCBI fileEvidenceTAS
GeneSIGLEC9AuthorityHGNC:10878Mapping file id27180 NCBI fileEvidenceTAS
GeneSIRPAAuthorityHGNC:9662Mapping file id140885 NCBI fileEvidenceTAS
GeneSIRPB1AuthorityHGNC:15928Mapping file id10326 NCBI fileEvidenceTAS
GeneSLC11A1AuthorityHGNC:10907Mapping file id6556 NCBI fileEvidenceTAS
GeneSLC15A4AuthorityHGNC:23090Mapping file id121260 NCBI fileEvidenceTAS
GeneSLC27A2AuthorityHGNC:10996Mapping file id11001 NCBI fileEvidenceTAS
GeneSLC2A3AuthorityHGNC:11007Mapping file id6515 NCBI fileEvidenceTAS
GeneSLC2A5AuthorityHGNC:11010Mapping file id6518 NCBI fileEvidenceTAS
GeneSLC44A2AuthorityHGNC:17292Mapping file id57153 NCBI fileEvidenceTAS
GeneSLCO4C1AuthorityHGNC:23612Mapping file id353189 NCBI fileEvidenceTAS
GeneSLPIAuthorityHGNC:11092Mapping file id6590 NCBI fileEvidenceTAS
GeneSNAP23AuthorityHGNC:11131Mapping file id8773 NCBI fileEvidenceTAS
GeneSNAP25AuthorityHGNC:11132Mapping file id6616 NCBI fileEvidenceTAS
GeneSNAP29AuthorityHGNC:11133Mapping file id9342 NCBI fileEvidenceTAS
GeneSPTAN1AuthorityHGNC:11273Mapping file id6709 NCBI fileEvidenceTAS
GeneSRP14AuthorityHGNC:11299Mapping file id6727 NCBI fileEvidenceTAS
GeneSTBD1AuthorityHGNC:24854Mapping file id8987 NCBI fileEvidenceTAS
GeneSTING1AuthorityHGNC:27962Mapping file id340061 NCBI fileEvidenceTAS
GeneSTK10AuthorityHGNC:11388Mapping file id6793 NCBI fileEvidenceTAS
GeneSTK11IPAuthorityHGNC:19184Mapping file id114790 NCBI fileEvidenceTAS
GeneSTOMAuthorityHGNC:3383Mapping file id2040 NCBI fileEvidenceTAS
GeneSURF4AuthorityHGNC:11476Mapping file id6836 NCBI fileEvidenceTAS
GeneSVIPAuthorityHGNC:25238Mapping file id258010 NCBI fileEvidenceTAS
GeneSYNGR1AuthorityHGNC:11498Mapping file id9145 NCBI fileEvidenceTAS
GeneTARM1AuthorityHGNC:37250Mapping file id441864 NCBI fileEvidenceTAS
GeneTBC1D10CAuthorityHGNC:24702Mapping file id374403 NCBI fileEvidenceTAS
GeneTCIRG1AuthorityHGNC:11647Mapping file id10312 NCBI fileEvidenceTAS
GeneTCN1AuthorityHGNC:11652Mapping file id6947 NCBI fileEvidenceTAS
GeneTICAM2AuthorityHGNC:21354Mapping file id353376 NCBI fileEvidenceTAS
GeneTIMP2AuthorityHGNC:11821Mapping file id7077 NCBI fileEvidenceTAS
GeneTLR2AuthorityHGNC:11848Mapping file id7097 NCBI fileEvidenceTAS
GeneTMBIM1AuthorityHGNC:23410Mapping file id64114 NCBI fileEvidenceTAS
GeneTMC6AuthorityHGNC:18021Mapping file id11322 NCBI fileEvidenceTAS
GeneTMED7-TICAM2AuthorityHGNC:33945Mapping file id100302736 NCBI fileEvidenceTAS
GeneTMEM179BAuthorityHGNC:33744Mapping file id374395 NCBI fileEvidenceTAS
GeneTMEM63AAuthorityHGNC:29118Mapping file id9725 NCBI fileEvidenceTAS
GeneTMT1AAuthorityHGNC:24550Mapping file id25840 NCBI fileEvidenceTAS
GeneTNFAIP6AuthorityHGNC:11898Mapping file id7130 NCBI fileEvidenceTAS
GeneTNFRSF1BAuthorityHGNC:11917Mapping file id7133 NCBI fileEvidenceTAS
GeneTOLLIPAuthorityHGNC:16476Mapping file id54472 NCBI fileEvidenceTAS
GeneTOM1AuthorityHGNC:11982Mapping file id10043 NCBI fileEvidenceTAS
GeneTRAPPC1AuthorityHGNC:19894Mapping file id58485 NCBI fileEvidenceTAS
GeneTRPM2AuthorityHGNC:12339Mapping file id7226 NCBI fileEvidenceTAS
GeneTSPAN14AuthorityHGNC:23303Mapping file id81619 NCBI fileEvidenceTAS
GeneTTRAuthorityHGNC:12405Mapping file id7276 NCBI fileEvidenceTAS
GeneTUBBAuthorityHGNC:20778Mapping file id203068 NCBI fileEvidenceTAS
GeneTUBB4BAuthorityHGNC:20771Mapping file id10383 NCBI fileEvidenceTAS
GeneTXNDC5AuthorityHGNC:21073Mapping file id81567 NCBI fileEvidenceTAS
GeneTYROBPAuthorityHGNC:12449Mapping file id7305 NCBI fileEvidenceTAS
GeneUBR4AuthorityHGNC:30313Mapping file id23352 NCBI fileEvidenceTAS
GeneUNC13DAuthorityHGNC:23147Mapping file id201294 NCBI fileEvidenceTAS
GeneVAMP8AuthorityHGNC:12647Mapping file id8673 NCBI fileEvidenceTAS
GeneVAPAAuthorityHGNC:12648Mapping file id9218 NCBI fileEvidenceTAS
GeneVAT1AuthorityHGNC:16919Mapping file id10493 NCBI fileEvidenceTAS
GeneVCLAuthorityHGNC:12665Mapping file id7414 NCBI fileEvidenceTAS
GeneVCPAuthorityHGNC:12666Mapping file id7415 NCBI fileEvidenceTAS
GeneVNN1AuthorityHGNC:12705Mapping file id8876 NCBI fileEvidenceTAS
GeneVPS35LAuthorityHGNC:24641Mapping file id57020 NCBI fileEvidenceTAS
GeneXRCC5AuthorityHGNC:12833Mapping file id7520 NCBI fileEvidenceTAS
GeneXRCC6AuthorityHGNC:4055Mapping file id2547 NCBI fileEvidenceTAS
GeneYPEL5AuthorityHGNC:18329Mapping file id51646 NCBI fileEvidenceTAS

Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.