Skip to content
Order

Pathway Human Homo sapiens

Response to elevated platelet cytosolic Ca2+

R-HSA-76005 in Reactome release 97: under Platelet activation, signaling and aggregation, with 134 genes placed in it by the mapping files and 2 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-76005 (mouse), R-RNO-76005 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 134 genes in this human pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 2
GeneA1BGAuthorityHGNC:5Mapping file id1 NCBI fileEvidenceTAS
GeneA2MAuthorityHGNC:7Mapping file id2 NCBI fileEvidenceTAS
GeneABCC4AuthorityHGNC:55Mapping file id10257 NCBI fileEvidenceTAS
GeneACTN1AuthorityHGNC:163Mapping file id87 NCBI fileEvidenceTAS
GeneACTN2AuthorityHGNC:164Mapping file id88 NCBI fileEvidenceTAS
GeneACTN4AuthorityHGNC:166Mapping file id81 NCBI fileEvidenceTAS
GeneAHSGAuthorityHGNC:349Mapping file id197 NCBI fileEvidenceTAS
GeneALBAuthorityHGNC:399Mapping file id213 NCBI fileEvidenceTAS
GeneALDOAAuthorityHGNC:414Mapping file id226 NCBI fileEvidenceTAS
GeneANXA5AuthorityHGNC:543Mapping file id308 NCBI fileEvidenceTAS
GeneAPLP2AuthorityHGNC:598Mapping file id334 NCBI fileEvidenceTAS
GeneAPOA1AuthorityHGNC:600Mapping file id335 NCBI fileEvidenceTAS
GeneAPOHAuthorityHGNC:616Mapping file id350 NCBI fileEvidenceTAS
GeneAPOOLAuthorityHGNC:24009Mapping file id139322 NCBI fileEvidenceTAS
GeneAPPAuthorityHGNC:620Mapping file id351 NCBI fileEvidenceTAS
GeneBRPF3AuthorityHGNC:14256Mapping file id27154 NCBI fileEvidenceTAS
GeneCALM1AuthorityHGNC:1442Mapping file id801 NCBI fileEvidenceTAS
GeneCALM2AuthorityHGNC:1445Mapping file id805 NCBI fileEvidenceTAS
GeneCALM3AuthorityHGNC:1449Mapping file id808 NCBI fileEvidenceTAS
GeneCALUAuthorityHGNC:1458Mapping file id813 NCBI fileEvidenceIEA
GeneCAP1AuthorityHGNC:20040Mapping file id10487 NCBI fileEvidenceIEA
GeneCD109AuthorityHGNC:21685Mapping file id135228 NCBI fileEvidenceTAS
GeneCD36AuthorityHGNC:1663Mapping file id948 NCBI fileEvidenceTAS
GeneCD63AuthorityHGNC:1692Mapping file id967 NCBI fileEvidenceTAS
GeneCD9AuthorityHGNC:1709Mapping file id928 NCBI fileEvidenceTAS
GeneCDC37L1AuthorityHGNC:17179Mapping file id55664 NCBI fileEvidenceTAS
GeneCFDAuthorityHGNC:2771Mapping file id1675 NCBI fileEvidenceTAS
GeneCFL1AuthorityHGNC:1874Mapping file id1072 NCBI fileEvidenceIEA
GeneCHID1AuthorityHGNC:28474Mapping file id66005 NCBI fileEvidenceTAS
GeneCLEC3BAuthorityHGNC:11891Mapping file id7123 NCBI fileEvidenceTAS
GeneCLUAuthorityHGNC:2095Mapping file id1191 NCBI fileEvidenceTAS
GeneCTSWAuthorityHGNC:2546Mapping file id1521 NCBI fileEvidenceTAS
GeneCYB5R1AuthorityHGNC:13397Mapping file id51706 NCBI fileEvidenceTAS
GeneCYRIBAuthorityHGNC:25216Mapping file id51571 NCBI fileEvidenceTAS
GeneECM1AuthorityHGNC:3153Mapping file id1893 NCBI fileEvidenceTAS
GeneEGFAuthorityHGNC:3229Mapping file id1950 NCBI fileEvidenceTAS
GeneENDOD1AuthorityHGNC:29129Mapping file id23052 NCBI fileEvidenceTAS
GeneF13A1AuthorityHGNC:3531Mapping file id2162 NCBI fileEvidenceTAS
GeneF5AuthorityHGNC:3542Mapping file id2153 NCBI fileEvidenceTAS
GeneF8AuthorityHGNC:3546Mapping file id2157 NCBI fileEvidenceTAS
GeneFAM3CAuthorityHGNC:18664Mapping file id10447 NCBI fileEvidenceTAS
GeneFERMT3AuthorityHGNC:23151Mapping file id83706 NCBI fileEvidenceTAS
GeneFGAAuthorityHGNC:3661Mapping file id2243 NCBI fileEvidenceTAS
GeneFGBAuthorityHGNC:3662Mapping file id2244 NCBI fileEvidenceTAS
GeneFGGAuthorityHGNC:3694Mapping file id2266 NCBI fileEvidenceTAS
GeneFLNAAuthorityHGNC:3754Mapping file id2316 NCBI fileEvidenceTAS
GeneFN1AuthorityHGNC:3778Mapping file id2335 NCBI fileEvidenceTAS
GeneGAS6AuthorityHGNC:4168Mapping file id2621 NCBI fileEvidenceTAS
GeneGTPBP2AuthorityHGNC:4670Mapping file id54676 NCBI fileEvidenceTAS
GeneHABP4AuthorityHGNC:17062Mapping file id22927 NCBI fileEvidenceTAS
GeneHGFAuthorityHGNC:4893Mapping file id3082 NCBI fileEvidenceTAS
GeneHRGAuthorityHGNC:5181Mapping file id3273 NCBI fileEvidenceTAS
GeneHSPA5AuthorityHGNC:5238Mapping file id3309 NCBI fileEvidenceIEA
GeneIGF1AuthorityHGNC:5464Mapping file id3479 NCBI fileEvidenceTAS
GeneIGF2AuthorityHGNC:5466Mapping file id3481 NCBI fileEvidenceTAS
GeneISLRAuthorityHGNC:6133Mapping file id3671 NCBI fileEvidenceTAS
GeneITGA2BAuthorityHGNC:6138Mapping file id3674 NCBI fileEvidenceTAS
GeneITGB3AuthorityHGNC:6156Mapping file id3690 NCBI fileEvidenceTAS
GeneITIH3AuthorityHGNC:6168Mapping file id3699 NCBI fileEvidenceTAS
GeneITIH4AuthorityHGNC:6169Mapping file id3700 NCBI fileEvidenceTAS
GeneKNG1AuthorityHGNC:6383Mapping file id3827 NCBI fileEvidenceTAS
GeneLAMP2AuthorityHGNC:6501Mapping file id3920 NCBI fileEvidenceTAS
GeneLEFTY2AuthorityHGNC:3122Mapping file id7044 NCBI fileEvidenceTAS
GeneLGALS3BPAuthorityHGNC:6564Mapping file id3959 NCBI fileEvidenceTAS
GeneLHFPL2AuthorityHGNC:6588Mapping file id10184 NCBI fileEvidenceTAS
GeneLY6G6FAuthorityHGNC:13933Mapping file id259215 NCBI fileEvidenceTAS
GeneMAGED2AuthorityHGNC:16353Mapping file id10916 NCBI fileEvidenceTAS
GeneMANFAuthorityHGNC:15461Mapping file id7873 NCBI fileEvidenceTAS
GeneMMRN1AuthorityHGNC:7178Mapping file id22915 NCBI fileEvidenceTAS
GeneNHLRC2AuthorityHGNC:24731Mapping file id374354 NCBI fileEvidenceTAS
GeneOLA1AuthorityHGNC:28833Mapping file id29789 NCBI fileEvidenceTAS
GeneORM1AuthorityHGNC:8498Mapping file id5004 NCBI fileEvidenceTAS
GeneORM2AuthorityHGNC:8499Mapping file id5005 NCBI fileEvidenceTAS
GenePCDH7AuthorityHGNC:8659Mapping file id5099 NCBI fileEvidenceTAS
GenePCYOX1LAuthorityHGNC:28477Mapping file id78991 NCBI fileEvidenceTAS
GenePDGFAAuthorityHGNC:8799Mapping file id5154 NCBI fileEvidenceTAS
GenePDGFBAuthorityHGNC:8800Mapping file id5155 NCBI fileEvidenceTAS
GenePECAM1AuthorityHGNC:8823Mapping file id5175 NCBI fileEvidenceTAS
GenePF4AuthorityHGNC:8861Mapping file id5196 NCBI fileEvidenceTAS
GenePFN1AuthorityHGNC:8881Mapping file id5216 NCBI fileEvidenceIEA
GenePHACTR2AuthorityHGNC:20956Mapping file id9749 NCBI fileEvidenceTAS
GenePLEKAuthorityHGNC:9070Mapping file id5341 NCBI fileEvidenceTAS
GenePLGAuthorityHGNC:9071Mapping file id5340 NCBI fileEvidenceTAS
GenePPBPAuthorityHGNC:9240Mapping file id5473 NCBI fileEvidenceTAS
GenePPIAAuthorityHGNC:9253Mapping file id5478 NCBI fileEvidenceIEA
GenePRKCAAuthorityHGNC:9393Mapping file id5578 NCBI fileEvidenceTAS
GenePRKCBAuthorityHGNC:9395Mapping file id5579 NCBI fileEvidenceTAS
GenePRKCGAuthorityHGNC:9402Mapping file id5582 NCBI fileEvidenceTAS
GenePROS1AuthorityHGNC:9456Mapping file id5627 NCBI fileEvidenceTAS
GenePSAPAuthorityHGNC:9498Mapping file id5660 NCBI fileEvidenceTAS
GeneQSOX1AuthorityHGNC:9756Mapping file id5768 NCBI fileEvidenceTAS
GeneRAB27BAuthorityHGNC:9767Mapping file id5874 NCBI fileEvidenceTAS
GeneRARRES2AuthorityHGNC:9868Mapping file id5919 NCBI fileEvidenceTAS
GeneSCCPDHAuthorityHGNC:24275Mapping file id51097 NCBI fileEvidenceTAS
GeneSCG3AuthorityHGNC:13707Mapping file id29106 NCBI fileEvidenceTAS
GeneSELENOPAuthorityHGNC:10751Mapping file id6414 NCBI fileEvidenceTAS
GeneSELPAuthorityHGNC:10721Mapping file id6403 NCBI fileEvidenceTAS
GeneSERPINA1AuthorityHGNC:8941Mapping file id5265 NCBI fileEvidenceTAS
GeneSERPINA3AuthorityHGNC:16Mapping file id12 NCBI fileEvidenceTAS
GeneSERPINA4AuthorityHGNC:8948Mapping file id5267 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.