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Pathway Human Homo sapiens

ESR-mediated signaling

R-HSA-8939211 in Reactome release 97: under Signaling by Nuclear Receptors, with 222 genes placed in it by the mapping files and 2 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-8939211 (mouse), R-RNO-8939211 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 222 genes in this human pathway; showing 101 to 200, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 2 of 3
GeneH2BC5AuthorityHGNC:4747Mapping file id3017 NCBI fileEvidenceTAS
GeneH2BC6AuthorityHGNC:4753Mapping file id8344 NCBI fileEvidenceTAS
GeneH2BC7AuthorityHGNC:4752Mapping file id8343 NCBI fileEvidenceTAS
GeneH2BC8AuthorityHGNC:4746Mapping file id8339 NCBI fileEvidenceTAS
GeneH2BC9AuthorityHGNC:4755Mapping file id8345 NCBI fileEvidenceTAS
GeneH3-3AAuthorityHGNC:4764Mapping file id3020 NCBI fileEvidenceTAS
GeneH3-3BAuthorityHGNC:4765Mapping file id3021 NCBI fileEvidenceTAS
GeneH3C1AuthorityHGNC:4766Mapping file id8350 NCBI fileEvidenceTAS
GeneH3C10AuthorityHGNC:4775Mapping file id8357 NCBI fileEvidenceTAS
GeneH3C11AuthorityHGNC:4771Mapping file id8354 NCBI fileEvidenceTAS
GeneH3C12AuthorityHGNC:4774Mapping file id8356 NCBI fileEvidenceTAS
GeneH3C13AuthorityHGNC:25311Mapping file id653604 NCBI fileEvidenceTAS
GeneH3C14AuthorityHGNC:20503Mapping file id126961 NCBI fileEvidenceTAS
GeneH3C15AuthorityHGNC:20505Mapping file id333932 NCBI fileEvidenceTAS
GeneH3C2AuthorityHGNC:4776Mapping file id8358 NCBI fileEvidenceTAS
GeneH3C3AuthorityHGNC:4768Mapping file id8352 NCBI fileEvidenceTAS
GeneH3C4AuthorityHGNC:4767Mapping file id8351 NCBI fileEvidenceTAS
GeneH3C6AuthorityHGNC:4769Mapping file id8353 NCBI fileEvidenceTAS
GeneH3C7AuthorityHGNC:4773Mapping file id8968 NCBI fileEvidenceTAS
GeneH3C8AuthorityHGNC:4772Mapping file id8355 NCBI fileEvidenceTAS
GeneH4C1AuthorityHGNC:4781Mapping file id8359 NCBI fileEvidenceTAS
GeneH4C11AuthorityHGNC:4785Mapping file id8363 NCBI fileEvidenceTAS
GeneH4C12AuthorityHGNC:4784Mapping file id8362 NCBI fileEvidenceTAS
GeneH4C13AuthorityHGNC:4791Mapping file id8368 NCBI fileEvidenceTAS
GeneH4C14AuthorityHGNC:4794Mapping file id8370 NCBI fileEvidenceTAS
GeneH4C15AuthorityHGNC:29607Mapping file id554313 NCBI fileEvidenceTAS
GeneH4C16AuthorityHGNC:20510Mapping file id121504 NCBI fileEvidenceTAS
GeneH4C2AuthorityHGNC:4789Mapping file id8366 NCBI fileEvidenceTAS
GeneH4C3AuthorityHGNC:4787Mapping file id8364 NCBI fileEvidenceTAS
GeneH4C4AuthorityHGNC:4782Mapping file id8360 NCBI fileEvidenceTAS
GeneH4C5AuthorityHGNC:4790Mapping file id8367 NCBI fileEvidenceTAS
GeneH4C6AuthorityHGNC:4783Mapping file id8361 NCBI fileEvidenceTAS
GeneH4C8AuthorityHGNC:4788Mapping file id8365 NCBI fileEvidenceTAS
GeneH4C9AuthorityHGNC:4793Mapping file id8294 NCBI fileEvidenceTAS
GeneHBEGFAuthorityHGNC:3059Mapping file id1839 NCBI fileEvidenceTAS
GeneHDAC1AuthorityHGNC:4852Mapping file id3065 NCBI fileEvidenceTAS
GeneHRASAuthorityHGNC:5173Mapping file id3265 NCBI fileEvidenceTAS
GeneHSP90AA1AuthorityHGNC:5253Mapping file id3320 NCBI fileEvidenceTAS
GeneHSP90AB1AuthorityHGNC:5258Mapping file id3326 NCBI fileEvidenceTAS
GeneHSPB1AuthorityHGNC:5246Mapping file id3315 NCBI fileEvidenceTAS
GeneIGF1RAuthorityHGNC:5465Mapping file id3480 NCBI fileEvidenceTAS
GeneJUNAuthorityHGNC:6204Mapping file id3725 NCBI fileEvidenceTAS
GeneJUNDAuthorityHGNC:6206Mapping file id3727 NCBI fileEvidenceTAS
GeneKANK1AuthorityHGNC:19309Mapping file id23189 NCBI fileEvidenceTAS
GeneKAT2BAuthorityHGNC:8638Mapping file id8850 NCBI fileEvidenceTAS
GeneKAT5AuthorityHGNC:5275Mapping file id10524 NCBI fileEvidenceTAS
GeneKCTD6AuthorityHGNC:22235Mapping file id200845 NCBI fileEvidenceTAS
GeneKDM1AAuthorityHGNC:29079Mapping file id23028 NCBI fileEvidenceTAS
GeneKDM4BAuthorityHGNC:29136Mapping file id23030 NCBI fileEvidenceTAS
GeneKPNA2AuthorityHGNC:6395Mapping file id3838 NCBI fileEvidenceTAS
GeneKRASAuthorityHGNC:6407Mapping file id3845 NCBI fileEvidenceTAS
GeneMAPK1AuthorityHGNC:6871Mapping file id5594 NCBI fileEvidenceIEA, TAS
GeneMAPK3AuthorityHGNC:6877Mapping file id5595 NCBI fileEvidenceIEA, TAS
GeneMED1AuthorityHGNC:9234Mapping file id5469 NCBI fileEvidenceTAS
GeneMMP2AuthorityHGNC:7166Mapping file id4313 NCBI fileEvidenceTAS
GeneMMP3AuthorityHGNC:7173Mapping file id4314 NCBI fileEvidenceTAS
GeneMMP7AuthorityHGNC:7174Mapping file id4316 NCBI fileEvidenceTAS
GeneMMP9AuthorityHGNC:7176Mapping file id4318 NCBI fileEvidenceTAS
GeneMOV10AuthorityHGNC:7200Mapping file id4343 NCBI fileEvidenceTAS
GeneMYBAuthorityHGNC:7545Mapping file id4602 NCBI fileEvidenceTAS
GeneMYCAuthorityHGNC:7553Mapping file id4609 NCBI fileEvidenceTAS
GeneNCOA1AuthorityHGNC:7668Mapping file id8648 NCBI fileEvidenceTAS
GeneNCOA2AuthorityHGNC:7669Mapping file id10499 NCBI fileEvidenceTAS
GeneNCOA3AuthorityHGNC:7670Mapping file id8202 NCBI fileEvidenceTAS
GeneNOS3AuthorityHGNC:7876Mapping file id4846 NCBI fileEvidenceTAS
GeneNR5A2AuthorityHGNC:7984Mapping file id2494 NCBI fileEvidenceTAS
GeneNRASAuthorityHGNC:7989Mapping file id4893 NCBI fileEvidenceTAS
GeneNRIP1AuthorityHGNC:8001Mapping file id8204 NCBI fileEvidenceTAS
GenePDPK1AuthorityHGNC:8816Mapping file id5170 NCBI fileEvidenceIEA, TAS
GenePGRAuthorityHGNC:8910Mapping file id5241 NCBI fileEvidenceTAS
GenePIK3CAAuthorityHGNC:8975Mapping file id5290 NCBI fileEvidenceTAS
GenePIK3R1AuthorityHGNC:8979Mapping file id5295 NCBI fileEvidenceTAS
GenePIK3R2AuthorityHGNC:8980Mapping file id5296 NCBI fileEvidenceTAS
GenePIK3R3AuthorityHGNC:8981Mapping file id8503 NCBI fileEvidenceTAS
GenePOLR2AAuthorityHGNC:9187Mapping file id5430 NCBI fileEvidenceTAS
GenePOLR2BAuthorityHGNC:9188Mapping file id5431 NCBI fileEvidenceTAS
GenePOLR2CAuthorityHGNC:9189Mapping file id5432 NCBI fileEvidenceTAS
GenePOLR2DAuthorityHGNC:9191Mapping file id5433 NCBI fileEvidenceTAS
GenePOLR2EAuthorityHGNC:9192Mapping file id5434 NCBI fileEvidenceTAS
GenePOLR2FAuthorityHGNC:9193Mapping file id5435 NCBI fileEvidenceTAS
GenePOLR2GAuthorityHGNC:9194Mapping file id5436 NCBI fileEvidenceTAS
GenePOLR2HAuthorityHGNC:9195Mapping file id5437 NCBI fileEvidenceTAS
GenePOLR2IAuthorityHGNC:9196Mapping file id5438 NCBI fileEvidenceTAS
GenePOLR2JAuthorityHGNC:9197Mapping file id5439 NCBI fileEvidenceTAS
GenePOLR2KAuthorityHGNC:9198Mapping file id5440 NCBI fileEvidenceTAS
GenePOLR2LAuthorityHGNC:9199Mapping file id5441 NCBI fileEvidenceTAS
GenePOU2F1AuthorityHGNC:9212Mapping file id5451 NCBI fileEvidenceTAS
GenePPIDAuthorityHGNC:9257Mapping file id5481 NCBI fileEvidenceTAS
GenePPP5CAuthorityHGNC:9322Mapping file id5536 NCBI fileEvidenceTAS
GenePRKCZAuthorityHGNC:9412Mapping file id5590 NCBI fileEvidenceIEA, TAS
GenePRMT1AuthorityHGNC:5187Mapping file id3276 NCBI fileEvidenceTAS
GenePTGES3AuthorityHGNC:16049Mapping file id10728 NCBI fileEvidenceTAS
GenePTK2AuthorityHGNC:9611Mapping file id5747 NCBI fileEvidenceTAS
GeneRAD21AuthorityHGNC:9811Mapping file id5885 NCBI fileEvidenceTAS
GeneRUNX1AuthorityHGNC:10471Mapping file id861 NCBI fileEvidenceTAS
GeneS1PR3AuthorityHGNC:3167Mapping file id1903 NCBI fileEvidenceTAS
GeneSHC1AuthorityHGNC:10840Mapping file id6464 NCBI fileEvidenceTAS
GeneSMC1AAuthorityHGNC:11111Mapping file id8243 NCBI fileEvidenceTAS
GeneSMC3AuthorityHGNC:2468Mapping file id9126 NCBI fileEvidenceTAS
GeneSP1AuthorityHGNC:11205Mapping file id6667 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.