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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Hemostasis

R-RNO-109582 in Reactome release 97: a top-level pathway, with 522 genes placed in it by the mapping files and 7 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-109582 (human), R-MMU-109582 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 522 genes in this rat pathway; showing 101 to 200, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 2 of 6
GeneDock6Authority367039Mapping file idENSRNOG00000010652 Ensembl fileEvidenceIEA
GeneDock7Authority313388Mapping file id313388 NCBI fileEvidenceIEA
GeneDock8Authority499337Mapping file idENSRNOG00000015894 Ensembl fileEvidenceIEA
GeneDok2Authority290361Mapping file idENSRNOG00000013922 Ensembl fileEvidenceIEA
GeneEcm1Authority116662Mapping file id116662 NCBI fileEvidenceIEA
GeneEgfAuthority25313Mapping file id25313 NCBI fileEvidenceIEA
GeneEhd1Authority293692Mapping file id293692 NCBI fileEvidenceIEA
GeneEhd2Authority361512Mapping file id361512 NCBI fileEvidenceIEA
GeneEhd3Authority192249Mapping file id192249 NCBI fileEvidenceIEA
GeneEndod1Authority363015Mapping file id363015 NCBI fileEvidenceIEA
GeneEpcamAuthority171577Mapping file id171577 NCBI fileEvidenceIEA
GeneEsamAuthority300519Mapping file id300519 NCBI fileEvidenceIEA
GeneF10Authority29243Mapping file id29243 NCBI fileEvidenceIEA
GeneF11Authority290757Mapping file idENSRNOG00000013684 Ensembl fileEvidenceIEA
GeneF11rAuthority116479Mapping file id116479 NCBI fileEvidenceIEA
GeneF12Authority306761Mapping file id306761 NCBI fileEvidenceIEA
GeneF13a1Authority60327Mapping file id60327 NCBI fileEvidenceIEA
GeneF13bAuthority289055Mapping file id289055 NCBI fileEvidenceIEA
GeneF2Authority29251Mapping file idENSRNOG00000016325 Ensembl fileEvidenceIEA
GeneF2rAuthority25439Mapping file idENSRNOG00000048043 Ensembl fileEvidenceIEA
GeneF2rl2Authority29636Mapping file id29636 NCBI fileEvidenceIEA
GeneF2rl3Authority116498Mapping file id116498 NCBI fileEvidenceIEA
GeneF3Authority25584Mapping file idENSRNOG00000011800 Ensembl fileEvidenceIEA
GeneF7Authority260320Mapping file id260320 NCBI fileEvidenceIEA
GeneF8Authority302470Mapping file id302470 NCBI fileEvidenceIEA
GeneF9Authority24946Mapping file id24946 NCBI fileEvidenceIEA
GeneFam3cAuthority312159Mapping file id312159 NCBI fileEvidenceIEA
GeneFcamrAuthority681070Mapping file idENSRNOG00000004393 Ensembl fileEvidenceIEA
GeneFcer1gAuthority25441Mapping file id25441 NCBI fileEvidenceIEA
GeneFermt3Authority309186Mapping file id309186 NCBI fileEvidenceIEA
GeneFgaAuthority361969Mapping file idENSRNOG00000024848 Ensembl fileEvidenceIEA
GeneFgbAuthority24366Mapping file id24366 NCBI fileEvidenceIEA
GeneFggAuthority24367Mapping file id24367 NCBI fileEvidenceIEA
GeneFgrAuthority79113Mapping file id79113 NCBI fileEvidenceIEA
GeneFlnaAuthority293860Mapping file id293860 NCBI fileEvidenceIEA
GeneFn1Authority25661Mapping file idENSRNOG00000014288 Ensembl fileEvidenceIEA
GeneFynAuthority25150Mapping file id25150 NCBI fileEvidenceIEA
GeneGad2Authority24380Mapping file idENSRNOG00000017803 Ensembl fileEvidenceIEA
GeneGas6Authority58935Mapping file idENSRNOG00000018233 Ensembl fileEvidenceIEA
GeneGata1Authority25172Mapping file id25172 NCBI fileEvidenceIEA
GeneGata2Authority25159Mapping file id25159 NCBI fileEvidenceIEA
GeneGata3Authority85471Mapping file id85471 NCBI fileEvidenceIEA
GeneGata4Authority54254Mapping file id54254 NCBI fileEvidenceIEA
GeneGata5Authority499951Mapping file id499951 NCBI fileEvidenceIEA
GeneGata6Authority29300Mapping file id29300 NCBI fileEvidenceIEA
GeneGlg1Authority29476Mapping file id29476 NCBI fileEvidenceIEA
GeneGna11Authority81662Mapping file id81662 NCBI fileEvidenceIEA
GeneGna13Authority303634Mapping file id303634 NCBI fileEvidenceIEA
GeneGna14Authority309242Mapping file idENSRNOG00000014840 Ensembl fileEvidenceIEA
GeneGnai1Authority25686Mapping file id25686 NCBI fileEvidenceIEA
GeneGnai2Authority81664Mapping file id81664 NCBI fileEvidenceIEA
GeneGnai3Authority25643Mapping file id25643 NCBI fileEvidenceIEA
GeneGnaqAuthority81666Mapping file id81666 NCBI fileEvidenceIEA
GeneGnat3Authority286924Mapping file id286924 NCBI fileEvidenceIEA
GeneGnb1Authority24400Mapping file id24400 NCBI fileEvidenceIEA
GeneGnb2Authority81667Mapping file id81667 NCBI fileEvidenceIEA
GeneGnb3Authority60449Mapping file id60449 NCBI fileEvidenceIEA
GeneGnb4Authority294962Mapping file id294962 NCBI fileEvidenceIEA
GeneGnb5Authority83579Mapping file id83579 NCBI fileEvidenceIEA
GeneGng11Authority64199Mapping file id64199 NCBI fileEvidenceIEA
GeneGng3Authority114117Mapping file id114117 NCBI fileEvidenceIEA
GeneGng5Authority79218Mapping file id79218 NCBI fileEvidenceIEA
GeneGng7Authority58979Mapping file id58979 NCBI fileEvidenceIEA
GeneGng8Authority245986Mapping file id245986 NCBI fileEvidenceIEA
GeneGngt1Authority680149Mapping file id680149 NCBI fileEvidenceIEA
GeneGp1baAuthority691992Mapping file id691992 NCBI fileEvidenceIEA
GeneGp1bbAuthority116727Mapping file id116727 NCBI fileEvidenceIEA
GeneGp5Authority25259Mapping file id25259 NCBI fileEvidenceIEA
GeneGp6Authority684555Mapping file id684555 NCBI fileEvidenceIEA
GeneGp9Authority502858Mapping file id502858 NCBI fileEvidenceIEA
GeneGpc1Authority58920Mapping file id58920 NCBI fileEvidenceIEA
GeneGpc2Authority171517Mapping file id171517 NCBI fileEvidenceIEA
GeneGpc3Authority25236Mapping file id25236 NCBI fileEvidenceIEA
GeneGpc4Authority317322Mapping file id317322 NCBI fileEvidenceIEA
GeneGpc5Authority306157Mapping file idENSRNOG00000071105 Ensembl fileEvidenceIEA
GeneGpc6Authority691984Mapping file id691984 NCBI fileEvidenceIEA
GeneGrb14Authority58844Mapping file id58844 NCBI fileEvidenceIEA
GeneGrb2Authority81504Mapping file id81504 NCBI fileEvidenceIEA
GeneGrb7Authority84427Mapping file id84427 NCBI fileEvidenceIEA
GeneGtpbp2Authority363195Mapping file id363195 NCBI fileEvidenceIEA
GeneH3c1Authority679994Mapping file id679994 NCBI fileEvidenceIEA
GeneH3c10Authority291159Mapping file id291159 NCBI fileEvidenceIEA
GeneH3c13Authority684762Mapping file idENSRNOG00000080043 Ensembl fileEvidenceIEA
GeneH3c15Authority310678Mapping file idENSRNOG00000070591 Ensembl fileEvidenceIEA
GeneH3f3aAuthority100361558Mapping file idENSRNOG00000003220 Ensembl fileEvidenceIEA
GeneH3f3bAuthority117056Mapping file id117056 NCBI fileEvidenceIEA
GeneHabp4Authority361196Mapping file id361196 NCBI fileEvidenceIEA
GeneHdac1Authority297893Mapping file id297893 NCBI fileEvidenceIEA
GeneHdac2Authority84577Mapping file idENSRNOG00000000604 Ensembl fileEvidenceIEA
GeneHgfAuthority24446Mapping file id24446 NCBI fileEvidenceIEA
GeneHist1h3bAuthority680498Mapping file id680498 NCBI fileEvidenceIEA
GeneHmg20bAuthority362825Mapping file id362825 NCBI fileEvidenceIEA
GeneHrasAuthority293621Mapping file id293621 NCBI fileEvidenceIEA
GeneHrgAuthority171016Mapping file id171016 NCBI fileEvidenceIEA
GeneHrgl1Authority681544Mapping file id681544 NCBI fileEvidenceIEA
GeneIgf1Authority24482Mapping file id24482 NCBI fileEvidenceIEA
GeneIgf2Authority24483Mapping file id24483 NCBI fileEvidenceIEA
GeneIghv-ps3Authority691963Mapping file idENSRNOG00000088841 Ensembl fileEvidenceIEA
GeneIgll1Authority100360919Mapping file id100360919 NCBI fileEvidenceIEA
GeneInpp5dAuthority54259Mapping file id54259 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.