Skip to content
Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Neurotransmitter receptors and postsynaptic signal transmission

R-RNO-112314 in Reactome release 97: under Transmission across Chemical Synapses, with 137 genes placed in it by the mapping files and 5 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-112314 (human), R-MMU-112314 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 137 genes in this rat pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 2
GeneActn2Authority291245Mapping file idENSRNOG00000017833 Ensembl fileEvidenceIEA
GeneAdcy1Authority305509Mapping file idENSRNOG00000059479 Ensembl fileEvidenceIEA
GeneAdcy2Authority81636Mapping file id81636 NCBI fileEvidenceIEA
GeneAdcy3Authority64508Mapping file id64508 NCBI fileEvidenceIEA
GeneAdcy4Authority54223Mapping file idENSRNOG00000020401 Ensembl fileEvidenceIEA
GeneAdcy5Authority64532Mapping file id64532 NCBI fileEvidenceIEA
GeneAdcy6Authority25289Mapping file id25289 NCBI fileEvidenceIEA
GeneAdcy7Authority84420Mapping file id84420 NCBI fileEvidenceIEA
GeneAdcy8Authority29241Mapping file id29241 NCBI fileEvidenceIEA
GeneAdcy9Authority302950Mapping file id302950 NCBI fileEvidenceIEA
GeneAp2a1Authority308578Mapping file idENSRNOG00000026243 Ensembl fileEvidenceIEA
GeneAp2b1Authority140670Mapping file id140670 NCBI fileEvidenceIEA
GeneAp2m1Authority116563Mapping file id116563 NCBI fileEvidenceIEA
GeneAp2s1Authority65046Mapping file id65046 NCBI fileEvidenceIEA
GeneArhgef9Authority66013Mapping file id66013 NCBI fileEvidenceIEA
GeneCacng2Authority84347Mapping file id84347 NCBI fileEvidenceIEA
GeneCacng3Authority140724Mapping file id140724 NCBI fileEvidenceIEA
GeneCacng4Authority140725Mapping file id140725 NCBI fileEvidenceIEA
GeneCacng8Authority140729Mapping file id140729 NCBI fileEvidenceIEA
GeneCalm1Authority24242Mapping file idENSRNOG00000072513 Ensembl fileEvidenceIEA
GeneCalm2Authority50663Mapping file idENSRNOG00000067086 Ensembl fileEvidenceIEA
GeneCalm3Authority24244Mapping file id24244 NCBI fileEvidenceIEA
GeneCamk1Authority171503Mapping file id171503 NCBI fileEvidenceIEA
GeneCamk2aAuthority25400Mapping file id25400 NCBI fileEvidenceIEA
GeneCamk2bAuthority24245Mapping file id24245 NCBI fileEvidenceIEA
GeneCamk2dAuthority24246Mapping file id24246 NCBI fileEvidenceIEA
GeneCamk2gAuthority171140Mapping file id171140 NCBI fileEvidenceIEA
GeneCamk4Authority25050Mapping file id25050 NCBI fileEvidenceIEA
GeneCamkk1Authority60341Mapping file id60341 NCBI fileEvidenceIEA
GeneCamkk2Authority83506Mapping file id83506 NCBI fileEvidenceIEA
GeneChrna1Authority79557Mapping file id79557 NCBI fileEvidenceIEA
GeneChrna2Authority170945Mapping file id170945 NCBI fileEvidenceIEA
GeneChrna3Authority25101Mapping file idENSRNOG00000013829 Ensembl fileEvidenceIEA
GeneChrna4Authority25590Mapping file id25590 NCBI fileEvidenceIEA
GeneChrna5Authority25102Mapping file idENSRNOG00000013610 Ensembl fileEvidenceIEA
GeneChrna6Authority81721Mapping file id81721 NCBI fileEvidenceIEA
GeneChrna7Authority25302Mapping file id25302 NCBI fileEvidenceIEA
GeneChrna9Authority65024Mapping file id65024 NCBI fileEvidenceIEA
GeneChrnb2Authority54239Mapping file id54239 NCBI fileEvidenceIEA
GeneChrnb3Authority171131Mapping file id171131 NCBI fileEvidenceIEA
GeneChrnb4Authority25103Mapping file id25103 NCBI fileEvidenceIEA
GeneChrndAuthority54240Mapping file id54240 NCBI fileEvidenceIEA
GeneChrneAuthority29422Mapping file id29422 NCBI fileEvidenceIEA
GeneChrngAuthority25753Mapping file id25753 NCBI fileEvidenceIEA
GeneCreb1Authority81646Mapping file id81646 NCBI fileEvidenceIEA
GeneDlg1Authority25252Mapping file id25252 NCBI fileEvidenceIEA
GeneDlg2Authority64053Mapping file id64053 NCBI fileEvidenceIEA
GeneDlg3Authority58948Mapping file id58948 NCBI fileEvidenceIEA
GeneDlg4Authority29495Mapping file id29495 NCBI fileEvidenceIEA
GeneEif4e2Authority363275Mapping file idENSRNOG00000019634 Ensembl fileEvidenceIEA
GeneEpb41l1Authority59317Mapping file id59317 NCBI fileEvidenceIEA
GeneGabbr1Authority81657Mapping file id81657 NCBI fileEvidenceIEA
GeneGabbr2Authority83633Mapping file id83633 NCBI fileEvidenceIEA
GeneGabra1Authority29705Mapping file id29705 NCBI fileEvidenceIEA
GeneGabra2Authority289606Mapping file idENSRNOG00000002349 Ensembl fileEvidenceIEA
GeneGabra3Authority24947Mapping file id24947 NCBI fileEvidenceIEA
GeneGabra4Authority140675Mapping file id140675 NCBI fileEvidenceIEA
GeneGabra5Authority29707Mapping file id29707 NCBI fileEvidenceIEA
GeneGabra6Authority29708Mapping file id29708 NCBI fileEvidenceIEA
GeneGabrb1Authority25450Mapping file id25450 NCBI fileEvidenceIEA
GeneGabrb2Authority25451Mapping file id25451 NCBI fileEvidenceIEA
GeneGabrb3Authority24922Mapping file id24922 NCBI fileEvidenceIEA
GeneGabrg2Authority29709Mapping file id29709 NCBI fileEvidenceIEA
GeneGabrg3Authority79211Mapping file id79211 NCBI fileEvidenceIEA
GeneGabrqAuthority65187Mapping file id65187 NCBI fileEvidenceIEA
GeneGabrr1Authority29694Mapping file id29694 NCBI fileEvidenceIEA
GeneGabrr2Authority29695Mapping file id29695 NCBI fileEvidenceIEA
GeneGabrr3Authority192258Mapping file id192258 NCBI fileEvidenceIEA
GeneGlra1Authority25674Mapping file id25674 NCBI fileEvidenceIEA
GeneGlra2Authority24397Mapping file id24397 NCBI fileEvidenceIEA
GeneGlra3Authority114516Mapping file idENSRNOG00000049792 Ensembl fileEvidenceIEA
GeneGlrbAuthority25456Mapping file id25456 NCBI fileEvidenceIEA
GeneGnai1Authority25686Mapping file id25686 NCBI fileEvidenceIEA
GeneGnai2Authority81664Mapping file id81664 NCBI fileEvidenceIEA
GeneGnai3Authority25643Mapping file id25643 NCBI fileEvidenceIEA
GeneGnalAuthority24611Mapping file id24611 NCBI fileEvidenceIEA
GeneGnat3Authority286924Mapping file id286924 NCBI fileEvidenceIEA
GeneGnb1Authority24400Mapping file id24400 NCBI fileEvidenceIEA
GeneGnb2Authority81667Mapping file id81667 NCBI fileEvidenceIEA
GeneGnb3Authority60449Mapping file id60449 NCBI fileEvidenceIEA
GeneGnb4Authority294962Mapping file id294962 NCBI fileEvidenceIEA
GeneGnb5Authority83579Mapping file id83579 NCBI fileEvidenceIEA
GeneGng11Authority64199Mapping file id64199 NCBI fileEvidenceIEA
GeneGng3Authority114117Mapping file id114117 NCBI fileEvidenceIEA
GeneGng5Authority79218Mapping file id79218 NCBI fileEvidenceIEA
GeneGng7Authority58979Mapping file id58979 NCBI fileEvidenceIEA
GeneGng8Authority245986Mapping file id245986 NCBI fileEvidenceIEA
GeneGngt1Authority680149Mapping file id680149 NCBI fileEvidenceIEA
GeneGria1Authority50592Mapping file id50592 NCBI fileEvidenceIEA
GeneGria2Authority29627Mapping file id29627 NCBI fileEvidenceIEA
GeneGria3Authority29628Mapping file id29628 NCBI fileEvidenceIEA
GeneGria4Authority29629Mapping file id29629 NCBI fileEvidenceIEA
GeneGrik1Authority29559Mapping file id29559 NCBI fileEvidenceIEA
GeneGrik2Authority54257Mapping file id54257 NCBI fileEvidenceIEA
GeneGrik3Authority298521Mapping file id298521 NCBI fileEvidenceIEA
GeneGrik4Authority24406Mapping file id24406 NCBI fileEvidenceIEA
GeneGrik5Authority24407Mapping file id24407 NCBI fileEvidenceIEA
GeneGrin1Authority24408Mapping file id24408 NCBI fileEvidenceIEA
GeneGrin2aAuthority24409Mapping file id24409 NCBI fileEvidenceIEA
GeneGrin2bAuthority24410Mapping file id24410 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.