Skip to content
Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)

R-RNO-381426 in Reactome release 97: under Metabolism of proteins, with 124 genes placed in it by the mapping files and 0 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-381426 (human), R-MMU-381426 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 124 genes in this rat pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 2
GeneAdam10Authority29650Mapping file id29650 NCBI fileEvidenceIEA
GeneAfpAuthority24177Mapping file idENSRNOG00000002889 Ensembl fileEvidenceIEA
GeneAhsgAuthority25373Mapping file id25373 NCBI fileEvidenceIEA
GeneAlbAuthority24186Mapping file id24186 NCBI fileEvidenceIEA
GeneAmbnAuthority25376Mapping file id25376 NCBI fileEvidenceIEA
GeneAmelxAuthority29160Mapping file id29160 NCBI fileEvidenceIEA
GeneAmtnAuthority689404Mapping file id689404 NCBI fileEvidenceIEA
GeneAno8Authority306340Mapping file idENSRNOG00000058662 Ensembl fileEvidenceIEA
GeneAplp2Authority64312Mapping file idENSRNOG00000047179 Ensembl fileEvidenceIEA
GeneApoa1Authority25081Mapping file id25081 NCBI fileEvidenceIEA
GeneApoa2Authority25649Mapping file id25649 NCBI fileEvidenceIEA
GeneApoa5Authority140638Mapping file id140638 NCBI fileEvidenceIEA
GeneApobAuthority54225Mapping file id54225 NCBI fileEvidenceIEA
GeneApoeAuthority25728Mapping file id25728 NCBI fileEvidenceIEA
GeneApol2Authority315111Mapping file id315111 NCBI fileEvidenceIEA
GeneApol3l1Authority315108Mapping file idENSRNOG00000042771 Ensembl fileEvidenceIEA
GeneApol7bl1Authority362951Mapping file idENSRNOG00000047782 Ensembl fileEvidenceIEA
GeneApol9aAuthority503164Mapping file id503164 NCBI fileEvidenceIEA
GeneApol9a-Apol7aAuthority133667826Mapping file idENSRNOG00000052981 Ensembl fileEvidenceIEA
GeneAppAuthority54226Mapping file id54226 NCBI fileEvidenceIEA
GeneBmp15Authority59302Mapping file idENSRNOG00000002984 Ensembl fileEvidenceIEA
GeneBmp4Authority25296Mapping file idENSRNOG00000009694 Ensembl fileEvidenceIEA
GeneBpifb2Authority296290Mapping file id296290 NCBI fileEvidenceIEA
GeneC3Authority24232Mapping file id24232 NCBI fileEvidenceIEA
GeneC4aAuthority24233Mapping file id24233 NCBI fileEvidenceIEA
GeneC4bAuthority406161Mapping file id406161 NCBI fileEvidenceIEA
GeneCcn1Authority83476Mapping file id83476 NCBI fileEvidenceIEA
GeneCdh2Authority83501Mapping file id83501 NCBI fileEvidenceIEA
GeneChgbAuthority24259Mapping file id24259 NCBI fileEvidenceIEA
GeneChrdl1Authority363455Mapping file id363455 NCBI fileEvidenceIEA
GeneCkap4Authority362859Mapping file id362859 NCBI fileEvidenceIEA
GeneCpAuthority24268Mapping file idENSRNOG00000011913 Ensembl fileEvidenceIEA
GeneCsf1Authority78965Mapping file idENSRNOG00000018659 Ensembl fileEvidenceIEA
GeneCst3Authority25307Mapping file id25307 NCBI fileEvidenceIEA
GeneCtsgAuthority290257Mapping file id290257 NCBI fileEvidenceIEA
GeneDmp1Authority25312Mapping file idENSRNOG00000002167 Ensembl fileEvidenceIEA
GeneDnajc3Authority63880Mapping file id63880 NCBI fileEvidenceIEA
GeneEnamAuthority289525Mapping file id289525 NCBI fileEvidenceIEA
GeneF2Authority29251Mapping file idENSRNOG00000016325 Ensembl fileEvidenceIEA
GeneFam20aAuthority303635Mapping file id303635 NCBI fileEvidenceIEA
GeneFam20cAuthority304334Mapping file id304334 NCBI fileEvidenceIEA
GeneFbn1Authority83727Mapping file id83727 NCBI fileEvidenceIEA
GeneFgaAuthority361969Mapping file idENSRNOG00000024848 Ensembl fileEvidenceIEA
GeneFgf23Authority170583Mapping file id170583 NCBI fileEvidenceIEA
GeneFggAuthority24367Mapping file id24367 NCBI fileEvidenceIEA
GeneFn1Authority25661Mapping file idENSRNOG00000014288 Ensembl fileEvidenceIEA
GeneFstl1Authority79210Mapping file id79210 NCBI fileEvidenceIEA
GeneFstl3Authority114031Mapping file id114031 NCBI fileEvidenceIEA
GeneFuca2Authority292485Mapping file id292485 NCBI fileEvidenceIEA
GeneGas6Authority58935Mapping file idENSRNOG00000018233 Ensembl fileEvidenceIEA
GeneGolm1Authority680692Mapping file id680692 NCBI fileEvidenceIEA
GeneGpc3Authority25236Mapping file id25236 NCBI fileEvidenceIEA
GeneGzmfAuthority266704Mapping file id266704 NCBI fileEvidenceIEA
GeneHrcAuthority292905Mapping file id292905 NCBI fileEvidenceIEA
GeneHsp90b1Authority362862Mapping file id362862 NCBI fileEvidenceIEA
GeneIgf1Authority24482Mapping file id24482 NCBI fileEvidenceIEA
GeneIgf2Authority24483Mapping file id24483 NCBI fileEvidenceIEA
GeneIgfalsAuthority79438Mapping file id79438 NCBI fileEvidenceIEA
GeneIgfbp1Authority25685Mapping file id25685 NCBI fileEvidenceIEA
GeneIgfbp2Authority25662Mapping file id25662 NCBI fileEvidenceIEA
GeneIgfbp3Authority24484Mapping file id24484 NCBI fileEvidenceIEA
GeneIgfbp4Authority360622Mapping file id360622 NCBI fileEvidenceIEA
GeneIgfbp5Authority25285Mapping file id25285 NCBI fileEvidenceIEA
GeneIgfbp6Authority25641Mapping file id25641 NCBI fileEvidenceIEA
GeneIl6Authority24498Mapping file id24498 NCBI fileEvidenceIEA
GeneItih2Authority498793Mapping file idENSRNOG00000001066 Ensembl fileEvidenceIEA
GeneKlk13Authority292848Mapping file id292848 NCBI fileEvidenceIEA
GeneKlk1b3Authority24594Mapping file id24594 NCBI fileEvidenceIEA
GeneKlk1c8Authority292866Mapping file idENSRNOG00000070110 Ensembl fileEvidenceIEA
GeneKlk5l1Authority408211Mapping file idENSRNOG00000067174 Ensembl fileEvidenceIEA
GeneKng2Authority24903Mapping file idENSRNOG00000065935 Ensembl fileEvidenceIEA
GeneKng2l1Authority25087Mapping file id25087 NCBI fileEvidenceIEA
GeneKtn1Authority361029Mapping file id361029 NCBI fileEvidenceIEA
GeneLgals1Authority56646Mapping file id56646 NCBI fileEvidenceIEA
GeneLOC148000960Authority148000960Mapping file idENSRNOG00000071307 Ensembl fileEvidenceIEA
GeneLtbp1Authority59107Mapping file id59107 NCBI fileEvidenceIEA
GeneMatn3Authority313954Mapping file id313954 NCBI fileEvidenceIEA
GeneMbtps1Authority89842Mapping file id89842 NCBI fileEvidenceIEA
GeneMegf11Authority691517Mapping file id691517 NCBI fileEvidenceIEA
GeneMeltfAuthority288038Mapping file id288038 NCBI fileEvidenceIEA
GeneMen1Authority29417Mapping file id29417 NCBI fileEvidenceIEA
GeneMepeAuthority79110Mapping file id79110 NCBI fileEvidenceIEA
GeneMfge8Authority25277Mapping file id25277 NCBI fileEvidenceIEA
GeneMgat4aAuthority367252Mapping file id367252 NCBI fileEvidenceIEA
GeneMia3Authority683007Mapping file id683007 NCBI fileEvidenceIEA
GeneMmp1bAuthority300338Mapping file id300338 NCBI fileEvidenceIEA
GeneMmp2Authority81686Mapping file id81686 NCBI fileEvidenceIEA
GeneMslnAuthority60333Mapping file id60333 NCBI fileEvidenceIEA
GeneMxra8Authority313770Mapping file idENSRNOG00000019244 Ensembl fileEvidenceIEA
GeneNotumAuthority303743Mapping file id303743 NCBI fileEvidenceIEA
GeneNucb1Authority84595Mapping file id84595 NCBI fileEvidenceIEA
GeneP4hbAuthority25506Mapping file id25506 NCBI fileEvidenceIEA
GenePappaAuthority313262Mapping file idENSRNOG00000033527 Ensembl fileEvidenceIEA
GenePappa2Authority680415Mapping file id680415 NCBI fileEvidenceIEA
GenePcsk9Authority298296Mapping file id298296 NCBI fileEvidenceIEA
GenePdia6Authority286906Mapping file id286906 NCBI fileEvidenceIEA
GenePenkAuthority29237Mapping file id29237 NCBI fileEvidenceIEA
GenePlgAuthority85253Mapping file id85253 NCBI fileEvidenceIEA
GenePnpla2Authority361676Mapping file id361676 NCBI fileEvidenceIEA
GenePrkcshAuthority300445Mapping file id300445 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Children

None: no pathway of this release's list names this one as a parent.

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.