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Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

GPCR downstream signalling

R-RNO-388396 in Reactome release 97: under Signaling by GPCR, with 488 genes placed in it by the mapping files and 6 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-388396 (human), R-MMU-388396 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 488 genes in this rat pathway; showing 101 to 200, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 2 of 5
GeneChrm2Authority81645Mapping file id81645 NCBI fileEvidenceIEA
GeneChrm3Authority24260Mapping file id24260 NCBI fileEvidenceIEA
GeneChrm4Authority25111Mapping file id25111 NCBI fileEvidenceIEA
GeneChrm5Authority53949Mapping file id53949 NCBI fileEvidenceIEA
GeneCist1Authority120093089Mapping file idENSRNOG00000043249 Ensembl fileEvidenceIEA
GeneCnr1Authority25248Mapping file id25248 NCBI fileEvidenceIEA
GeneCnr2Authority57302Mapping file id57302 NCBI fileEvidenceIEA
GeneCreb1Authority81646Mapping file id81646 NCBI fileEvidenceIEA
GeneCreb3l2Authority362339Mapping file idENSRNOG00000026705 Ensembl fileEvidenceIEA
GeneCx3cl1Authority89808Mapping file id89808 NCBI fileEvidenceIEA
GeneCx3cr1Authority171056Mapping file id171056 NCBI fileEvidenceIEA
GeneCxcl1Authority81503Mapping file id81503 NCBI fileEvidenceIEA
GeneCxcl10Authority245920Mapping file id245920 NCBI fileEvidenceIEA
GeneCxcl11Authority305236Mapping file id305236 NCBI fileEvidenceIEA
GeneCxcl12Authority24772Mapping file id24772 NCBI fileEvidenceIEA
GeneCxcl13Authority498335Mapping file id498335 NCBI fileEvidenceIEA
GeneCxcl16Authority497942Mapping file id497942 NCBI fileEvidenceIEA
GeneCxcl2Authority114105Mapping file id114105 NCBI fileEvidenceIEA
GeneCxcl3Authority171551Mapping file id171551 NCBI fileEvidenceIEA
GeneCxcl6Authority60665Mapping file id60665 NCBI fileEvidenceIEA
GeneCxcl9Authority246759Mapping file id246759 NCBI fileEvidenceIEA
GeneCxcr1Authority54258Mapping file id54258 NCBI fileEvidenceIEA
GeneCxcr2Authority29385Mapping file id29385 NCBI fileEvidenceIEA
GeneCxcr3Authority84475Mapping file id84475 NCBI fileEvidenceIEA
GeneCxcr4Authority60628Mapping file id60628 NCBI fileEvidenceIEA
GeneCxcr5Authority29363Mapping file id29363 NCBI fileEvidenceIEA
GeneCxcr6Authority100124593Mapping file idENSRNOG00000089617 Ensembl fileEvidenceIEA
GeneCysltr1Authority114099Mapping file id114099 NCBI fileEvidenceIEA
GeneCysltr2Authority170926Mapping file id170926 NCBI fileEvidenceIEA
GeneDaglaAuthority309207Mapping file id309207 NCBI fileEvidenceIEA
GeneDaglbAuthority304289Mapping file idENSRNOG00000001079 Ensembl fileEvidenceIEA
GeneDgkaAuthority140866Mapping file id140866 NCBI fileEvidenceIEA
GeneDgkbAuthority54248Mapping file id54248 NCBI fileEvidenceIEA
GeneDgkdAuthority368088Mapping file idENSRNOG00000023238 Ensembl fileEvidenceIEA
GeneDgkeAuthority497978Mapping file id497978 NCBI fileEvidenceIEA
GeneDgkgAuthority25666Mapping file id25666 NCBI fileEvidenceIEA
GeneDgkhAuthority361076Mapping file idENSRNOG00000010065 Ensembl fileEvidenceIEA
GeneDgkiAuthority688705Mapping file id688705 NCBI fileEvidenceIEA
GeneDgkkAuthority367745Mapping file idENSRNOG00000039323 Ensembl fileEvidenceIEA
GeneDgkqAuthority100361138Mapping file id100361138 NCBI fileEvidenceIEA
GeneDgkzAuthority81821Mapping file id81821 NCBI fileEvidenceIEA
GeneDrd3Authority29238Mapping file id29238 NCBI fileEvidenceIEA
GeneDrd4Authority25432Mapping file idENSRNOG00000017927 Ensembl fileEvidenceIEA
GeneEct2Authority361921Mapping file id361921 NCBI fileEvidenceIEA
GeneEdn1Authority24323Mapping file id24323 NCBI fileEvidenceIEA
GeneEdn2Authority24324Mapping file idENSRNOG00000009390 Ensembl fileEvidenceIEA
GeneEdn3Authority366270Mapping file id366270 NCBI fileEvidenceIEA
GeneEdnraAuthority24326Mapping file id24326 NCBI fileEvidenceIEA
GeneEdnrbAuthority50672Mapping file id50672 NCBI fileEvidenceIEA
GeneEgfrAuthority24329Mapping file id24329 NCBI fileEvidenceIEA
GeneF2Authority29251Mapping file idENSRNOG00000016325 Ensembl fileEvidenceIEA
GeneF2rAuthority25439Mapping file idENSRNOG00000048043 Ensembl fileEvidenceIEA
GeneF2rl1Authority116677Mapping file id116677 NCBI fileEvidenceIEA
GeneF2rl2Authority29636Mapping file id29636 NCBI fileEvidenceIEA
GeneF2rl3Authority116498Mapping file id116498 NCBI fileEvidenceIEA
GeneFfar1Authority266607Mapping file id266607 NCBI fileEvidenceIEA
GeneFfar2Authority292794Mapping file id292794 NCBI fileEvidenceIEA
GeneFfar3Authority365228Mapping file id365228 NCBI fileEvidenceIEA
GeneFfar4Authority294075Mapping file id294075 NCBI fileEvidenceIEA
GeneFgd1Authority363460Mapping file id363460 NCBI fileEvidenceIEA
GeneFgd2Authority309653Mapping file id309653 NCBI fileEvidenceIEA
GeneFgd3Authority361223Mapping file idENSRNOG00000016225 Ensembl fileEvidenceIEA
GeneFgd4Authority246174Mapping file id246174 NCBI fileEvidenceIEA
GeneFn1Authority25661Mapping file idENSRNOG00000014288 Ensembl fileEvidenceIEA
GeneFpr1Authority292409Mapping file id292409 NCBI fileEvidenceIEA
GeneFpr2Authority690158Mapping file id690158 NCBI fileEvidenceIEA
GeneFpr2l1Authority292419Mapping file id292419 NCBI fileEvidenceIEA
GeneFpr2l2Authority690198Mapping file idENSRNOG00000079547 Ensembl fileEvidenceIEA
GeneGabbr1Authority81657Mapping file id81657 NCBI fileEvidenceIEA
GeneGabbr2Authority83633Mapping file id83633 NCBI fileEvidenceIEA
GeneGalAuthority29141Mapping file id29141 NCBI fileEvidenceIEA
GeneGalr1Authority50577Mapping file id50577 NCBI fileEvidenceIEA
GeneGalr2Authority29234Mapping file id29234 NCBI fileEvidenceIEA
GeneGalr3Authority29235Mapping file id29235 NCBI fileEvidenceIEA
GeneGastAuthority25320Mapping file id25320 NCBI fileEvidenceIEA
GeneGcgrAuthority24953Mapping file id24953 NCBI fileEvidenceIEA
GeneGhrlAuthority59301Mapping file id59301 NCBI fileEvidenceIEA
GeneGhsrAuthority84022Mapping file id84022 NCBI fileEvidenceIEA
GeneGna11Authority81662Mapping file id81662 NCBI fileEvidenceIEA
GeneGna12Authority81663Mapping file id81663 NCBI fileEvidenceIEA
GeneGna13Authority303634Mapping file id303634 NCBI fileEvidenceIEA
GeneGna14Authority309242Mapping file idENSRNOG00000014840 Ensembl fileEvidenceIEA
GeneGnai1Authority25686Mapping file id25686 NCBI fileEvidenceIEA
GeneGnai2Authority81664Mapping file id81664 NCBI fileEvidenceIEA
GeneGnai3Authority25643Mapping file id25643 NCBI fileEvidenceIEA
GeneGnalAuthority24611Mapping file id24611 NCBI fileEvidenceIEA
GeneGnaqAuthority81666Mapping file id81666 NCBI fileEvidenceIEA
GeneGnat1Authority363143Mapping file id363143 NCBI fileEvidenceIEA
GeneGnat2Authority365901Mapping file id365901 NCBI fileEvidenceIEA
GeneGnat3Authority286924Mapping file id286924 NCBI fileEvidenceIEA
GeneGnazAuthority25740Mapping file id25740 NCBI fileEvidenceIEA
GeneGnb1Authority24400Mapping file id24400 NCBI fileEvidenceIEA
GeneGnb2Authority81667Mapping file id81667 NCBI fileEvidenceIEA
GeneGnb3Authority60449Mapping file id60449 NCBI fileEvidenceIEA
GeneGnb4Authority294962Mapping file id294962 NCBI fileEvidenceIEA
GeneGnb5Authority83579Mapping file id83579 NCBI fileEvidenceIEA
GeneGng11Authority64199Mapping file id64199 NCBI fileEvidenceIEA
GeneGng3Authority114117Mapping file id114117 NCBI fileEvidenceIEA
GeneGng5Authority79218Mapping file id79218 NCBI fileEvidenceIEA
GeneGng7Authority58979Mapping file id58979 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.